GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002385-TA|BGIBMGA002385-PA|undefined
         (354 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    34   0.005
DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.        24   7.3  

>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 34.3 bits (75), Expect = 0.005
 Identities = 15/34 (44%), Positives = 21/34 (61%)

Query: 289 PYPVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 322
           PYP++  V  P+ IP+ +  P  IEK VP  +EK
Sbjct: 197 PYPLQVNVEQPIKIPIYKVIPKVIEKPVPYTVEK 230



 Score = 34.3 bits (75), Expect = 0.005
 Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 4/37 (10%)

Query: 286 KHIPYPVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 322
           K IP  +EK VP+ V    ++PYP+ +EK  PV + K
Sbjct: 214 KVIPKVIEKPVPYTV----EKPYPIEVEKPFPVEVLK 246



 Score = 32.7 bits (71), Expect = 0.016
 Identities = 12/33 (36%), Positives = 20/33 (60%)

Query: 288 IPYPVEKAVPFPVNIPVDRPYPVHIEKHVPVHI 320
           +P+PV  AVP  V + + +PYP+ +    P+ I
Sbjct: 178 VPHPVPIAVPHYVKVYIPQPYPLQVNVEQPIKI 210



 Score = 32.3 bits (70), Expect = 0.021
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 8/36 (22%)

Query: 289 PYPVEKAVPFPV------NIPVDRPYPVHIE--KHV 316
           PYP+E   PFPV       +PV +PYPV +   KH+
Sbjct: 231 PYPIEVEKPFPVEVLKKFEVPVPKPYPVPVTVYKHI 266



 Score = 31.1 bits (67), Expect = 0.048
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 4/37 (10%)

Query: 286 KHIPYPVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 322
           K +PY VEK  P+P+   V++P+PV + K   V + K
Sbjct: 222 KPVPYTVEK--PYPIE--VEKPFPVEVLKKFEVPVPK 254



 Score = 25.0 bits (52), Expect = 3.2
 Identities = 11/32 (34%), Positives = 18/32 (56%)

Query: 286 KHIPYPVEKAVPFPVNIPVDRPYPVHIEKHVP 317
           K +P PV + V  PV  PV    P +++ ++P
Sbjct: 164 KTVPVPVFQKVGVPVPHPVPIAVPHYVKVYIP 195



 Score = 25.0 bits (52), Expect = 3.2
 Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 4/31 (12%)

Query: 294 KAVPFPV----NIPVDRPYPVHIEKHVPVHI 320
           K VP PV     +PV  P P+ +  +V V+I
Sbjct: 164 KTVPVPVFQKVGVPVPHPVPIAVPHYVKVYI 194


>DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.
          Length = 418

 Score = 23.8 bits (49), Expect = 7.3
 Identities = 7/14 (50%), Positives = 11/14 (78%)

Query: 295 AVPFPVNIPVDRPY 308
           ++PFP N  V+RP+
Sbjct: 206 SIPFPTNATVERPF 219


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.320    0.142    0.441 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,552
Number of Sequences: 2123
Number of extensions: 1858
Number of successful extensions: 19
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 12
length of query: 354
length of database: 516,269
effective HSP length: 65
effective length of query: 289
effective length of database: 378,274
effective search space: 109321186
effective search space used: 109321186
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 48 (23.4 bits)