Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002383-TA|BGIBMGA002383-PA|IPR009030|Growth factor,
receptor, IPR002919|Protease inhibitor I8, cysteine-rich trypsin
inhibitor-like, IPR006210|EGF, IPR003341|Cysteine rich repeat,
tripleX, IPR013032|EGF-like region
(339 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0156 - 1364856-1365401 47 3e-05
08_02_1159 + 24773328-24773994,24775430-24775558,24776080-247762... 42 0.001
04_01_0377 - 4970034-4970687 40 0.002
01_01_0155 - 1362710-1363267 40 0.002
01_01_0149 - 1340621-1341154 39 0.005
04_04_1120 + 31037811-31038813,31038903-31038991,31039094-310391... 39 0.007
09_04_0477 - 17932797-17933974,17934454-17934612,17934693-17934957 36 0.062
01_01_0153 - 1352982-1353731 34 0.14
01_01_0151 - 1346942-1347682 34 0.14
09_02_0533 - 10325681-10326211,10326260-10326328,10326758-103268... 33 0.33
03_05_1019 + 29736644-29736709,29737156-29737515,29737595-297377... 32 0.76
03_02_0372 + 7864015-7864065,7864167-7864208,7864292-7864322,786... 31 1.0
01_01_0150 - 1344247-1345011 31 1.0
08_01_0764 - 7332969-7333870,7334044-7334369,7334712-7335384,733... 31 1.3
09_03_0111 - 12440818-12441129,12441242-12441585,12441663-124419... 31 1.8
12_01_0913 + 8882193-8883510,8887633-8887865,8889619-8889871,889... 30 2.3
09_02_0045 + 3479503-3480285 30 2.3
06_01_1083 - 8859190-8859450,8859555-8859626 30 2.3
04_04_1268 - 32262994-32263017,32263411-32263488,32263653-322638... 30 2.3
11_08_0004 + 27518384-27519018,27519147-27519397,27520437-275205... 30 3.1
10_08_0333 - 16850267-16851802 30 3.1
04_04_1263 - 32207636-32207938,32208020-32208170,32208263-322085... 30 3.1
01_06_0916 + 32950575-32950656,32952061-32952272,32952408-329524... 30 3.1
09_04_0479 - 17948043-17949037,17949554-17949715,17949809-179502... 29 4.1
04_03_0618 - 18071612-18072795,18073007-18073072,18074101-180741... 29 4.1
09_04_0472 - 17895285-17896459,17897113-17897271,17897374-178977... 29 5.4
05_03_0439 + 14028234-14028287,14029394-14029468,14029562-140296... 29 5.4
01_01_0491 + 3629025-3629051,3629679-3629778,3629947-3630015,363... 29 5.4
10_01_0054 - 773395-774518,776957-777124,777455-778376 29 7.1
04_04_1523 - 34148407-34150224 29 7.1
04_03_0130 - 11622139-11623325,11626144-11627116 29 7.1
02_02_0030 - 6207784-6208154,6208286-6211310 29 7.1
11_06_0368 + 22756988-22758205 28 9.4
10_01_0296 + 3069605-3070535,3071127-3071294,3075307-3076454 28 9.4
07_01_0890 - 7437901-7439339,7439452-7439657,7439841-7440171,744... 28 9.4
06_01_1133 + 9364842-9364850,9364929-9365048,9365157-9365476,936... 28 9.4
04_03_0602 - 17884667-17885817,17885946-17886113,17886413-17887313 28 9.4
01_06_0193 - 27359575-27361962 28 9.4
01_01_1043 + 8228201-8228209,8228364-8228439,8228527-8228903 28 9.4
>01_01_0156 - 1364856-1365401
Length = 181
Score = 46.8 bits (106), Expect = 3e-05
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Query: 158 VCPDGYYN-DPVE-CSPRC--ERCVNGTCTE--PGLCTCDPGYKNIDDVCVPKCLDCRNG 211
+C D Y+ DP C+PR + C N TCT P +C C+ K C C DC+
Sbjct: 98 ICSDVYWGADPGPFCTPRPWGDCCTNTTCTRSIPPICRCNDKVKK----CAAACKDCKRV 153
Query: 212 ECVAPNDCLCHDNYAMSNGTCAPVCRRACTN 242
+ P +C D + G P C+ +C N
Sbjct: 154 KSSKPPRYVCQDQF---TGQPGPKCKHSCEN 181
Score = 33.1 bits (72), Expect = 0.33
Identities = 40/151 (26%), Positives = 51/151 (33%), Gaps = 23/151 (15%)
Query: 167 PVECSPRCERCVNGTCTEPGLCTCDPGYKNIDDVCVPKCLDCRNGECVAPNDCLCHDNY- 225
P +C ER T T P C+ + CV +C C+ P +C D Y
Sbjct: 49 PWKCCDNIERLP--TKTNPPQWRCNDELE--PSKCVAQCEVCQEAPGPFPGPLICSDVYW 104
Query: 226 -AMSNGTCAP-VCRRACTNGAC--SEPDKCTCDDGYRLSPEDPFVCLPVCSERCVNSHCS 281
A C P CTN C S P C C+D + C C + C S
Sbjct: 105 GADPGPFCTPRPWGDCCTNTTCTRSIPPICRCNDKVK-------KCAAACKD-CKRVKSS 156
Query: 282 SPNTCTCFKDYERNDTNSNVCYKKCDGACEN 312
P C D + KC +CEN
Sbjct: 157 KPPRYVC------QDQFTGQPGPKCKHSCEN 181
>08_02_1159 +
24773328-24773994,24775430-24775558,24776080-24776220,
24777393-24777487,24777545-24778606
Length = 697
Score = 41.5 bits (93), Expect = 0.001
Identities = 49/179 (27%), Positives = 65/179 (36%), Gaps = 29/179 (16%)
Query: 93 TSGCVNGTCEAPEVCTC-LEPLVLRRGH-CVEPTCSPACDSYSSCTDFN-VCTCVNNTIA 149
T+ G PE L L+L C T + A S C N C N T A
Sbjct: 139 TNMVTKGISNTPEALPAMLNWLILSNSSACSASTNASAPSSAPECCSANSFCKGYNGTTA 198
Query: 150 -LNGSQCAPVCPDGYYNDPVECSPRCERCVNGTCTEPGLCTCDPGYKNIDDVCVPKCLDC 208
+G +C C DGY +P V+G C + C Y C C +
Sbjct: 199 DYDGYRC--YCSDGYEGNPY---------VDGGCRDIDECKSPHIYP-----CYGDCKNT 242
Query: 209 RNGECVAPNDCLCHDNYAMSNGTCAPVCRRACTNGACSEPDKCTCDDGYRLSPEDPFVC 267
R G DC CH Y N + C+ C+EP+K +C G ++ FVC
Sbjct: 243 RGGY-----DCQCHHGYK-GNASILNGCQDI---NECAEPEKYSCYGGLCINTPGAFVC 292
Score = 29.1 bits (62), Expect = 5.4
Identities = 35/143 (24%), Positives = 51/143 (35%), Gaps = 18/143 (12%)
Query: 203 PKCLDCRNGECVAPNDCLCHDNYAMSNGTCAPVCRRA---CT--NGACSEPD--KCTCDD 255
P+ L + N C + S + AP C A C NG ++ D +C C D
Sbjct: 150 PEALPAMLNWLILSNSSACSASTNASAPSSAPECCSANSFCKGYNGTTADYDGYRCYCSD 209
Query: 256 GYRLSPEDPFVCLPVCSERCVNSHCSSPNTCTCFKDYERNDTNSNV-CYK--KCDGACEN 312
GY +P C + C SP+ C+ D + + C+ K + + N
Sbjct: 210 GYEGNPYVDGGCRDI-------DECKSPHIYPCYGDCKNTRGGYDCQCHHGYKGNASILN 262
Query: 313 GRCSLDGACECDSGYILSNGTCI 335
G C C Y G CI
Sbjct: 263 G-CQDINECAEPEKYSCYGGLCI 284
>04_01_0377 - 4970034-4970687
Length = 217
Score = 40.3 bits (90), Expect = 0.002
Identities = 38/147 (25%), Positives = 50/147 (34%), Gaps = 19/147 (12%)
Query: 115 LRRGHCVEPTCSPACDSYSSC-TDFNVCTCVNNTIALNGSQC---APVCPDGYYNDPVEC 170
L R +C S AC S C + TC NN C + C G N P
Sbjct: 44 LGRDYCGTGCQSGACCSSQRCGSQGGGATCSNNQCCSQYGYCGFGSEYCGSGCQNGPCRA 103
Query: 171 SPRCERCVNGTCTEPGLCTCDPGYKNI-DDVCVPKCLDCRNGECVAPNDC-------LCH 222
+C R NG +C GY + + C C++G C C C
Sbjct: 104 DIKCGRNANGELCPNNMCCSQWGYCGLGSEFCGN---GCQSGACCPEKRCGKQAGGDKCP 160
Query: 223 DNYAMS-NGTC---APVCRRACTNGAC 245
+N+ S G C C C +G C
Sbjct: 161 NNFCCSAGGYCGLGGNYCGSGCQSGGC 187
Score = 29.5 bits (63), Expect = 4.1
Identities = 49/183 (26%), Positives = 63/183 (34%), Gaps = 34/183 (18%)
Query: 174 CERCVNGTCTEPGLCTCDPGYKNID-DVCVPKCLDCRNGECVAPNDC-------LCHDNY 225
C + +G LC GY + D C C++G C + C C +N
Sbjct: 21 CGKQNDGMICPHNLCCSQFGYCGLGRDYCGT---GCQSGACCSSQRCGSQGGGATCSNNQ 77
Query: 226 AMSN-GTC---APVCRRACTNGACSEPDKCTCDDGYRLSPEDPFVCLP--VC---SERCV 276
S G C + C C NG C KC + L P + C C SE C
Sbjct: 78 CCSQYGYCGFGSEYCGSGCQNGPCRADIKCGRNANGELCPNN-MCCSQWGYCGLGSEFCG 136
Query: 277 NSHCSSPNTC---TCFKDYERNDTNSNVCYKKCDGACENGRCSLDGACECDSGYILSNGT 333
N C S C C K + +N C C G C L G C SG +G
Sbjct: 137 NG-CQSGACCPEKRCGKQAGGDKCPNNFC---CSA---GGYCGL-GGNYCGSG--CQSGG 186
Query: 334 CIR 336
C +
Sbjct: 187 CYK 189
>01_01_0155 - 1362710-1363267
Length = 185
Score = 40.3 bits (90), Expect = 0.002
Identities = 27/102 (26%), Positives = 41/102 (40%), Gaps = 8/102 (7%)
Query: 166 DPVECSPRCERCVNGTCTEPGLCTCDPGYKNIDD--VCVPK----CLDCRNGECVAPNDC 219
+P +C+ +CE C + + PG C Y D C P+ C D P C
Sbjct: 76 EPSQCAAQCEVCQDQEAS-PGRLICGDVYWGADPGPFCTPRPWGDCCDMDICSRSLPPIC 134
Query: 220 LCHDNYAMSNGTCAPVCRRACTNGACSEPDKCTCDDGYRLSP 261
C D C C++ ++ + SEP + C D +R P
Sbjct: 135 RCADEVESCAAACKD-CQQLESSSSSSEPPRYVCHDWFRGEP 175
>01_01_0149 - 1340621-1341154
Length = 177
Score = 39.1 bits (87), Expect = 0.005
Identities = 31/105 (29%), Positives = 41/105 (39%), Gaps = 10/105 (9%)
Query: 165 NDPV-ECSPRCERC---VNGTCTEPGLCTCDPGYK--NIDDVCVPKCLD--CRNGECVAP 216
ND V +C+ CE C V G E + CD Y N VC P+ C C
Sbjct: 70 NDEVKQCAAACENCLQLVPGAGGEDVVFVCDDWYPTTNPGPVCTPRPWGDCCDKAFCTRS 129
Query: 217 NDCLCHDNYAMSNGTCAPVCRRACTNGACSEPDKCTCDDGYRLSP 261
+CH A +CA C+ + SEP + C D + P
Sbjct: 130 LPPICH--CADEVASCAAACKECDMVNSSSEPPRYICRDHFTGEP 172
>04_04_1120 +
31037811-31038813,31038903-31038991,31039094-31039163,
31039270-31039353,31039452-31039528,31039631-31039712,
31039847-31039929,31040270-31040333,31040435-31040566,
31040674-31040777,31040901-31040996,31041144-31041251
Length = 663
Score = 38.7 bits (86), Expect = 0.007
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 12/91 (13%)
Query: 226 AMSNGTCAPVCRRACTNGACSEPD--KCTCDDGYRLSPEDPFVCLPV--CSER--CVNSH 279
AM+NG C R T ACS+ D C C G++ D C V CSE+ C H
Sbjct: 476 AMNNGGCWKGTRDGKTFSACSDSDLSGCKCPPGFK---GDGLHCEDVDECSEKLACSCPH 532
Query: 280 CSSPNTCTCFKDYERNDTNSNVCYKKCDGAC 310
CS NT + ++ + +N+ Y K + C
Sbjct: 533 CSCKNT---WGSFDCSCHGNNLMYIKAEDTC 560
>09_04_0477 - 17932797-17933974,17934454-17934612,17934693-17934957
Length = 533
Score = 35.5 bits (78), Expect = 0.062
Identities = 23/64 (35%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
Query: 274 RCVNSHCSSPNTCTCFKDYERNDTNSNVCYKKCDGACENGRCSLDGACECDSGYILSNGT 333
RC SH N + N+ NV Y C G C N S C C G + NGT
Sbjct: 70 RCNCSHGYEGNPYIKDGCEDINECLDNVTYP-CPGICNNTMGSF--TCSCHQGNYMENGT 126
Query: 334 CIRN 337
CI N
Sbjct: 127 CIPN 130
Score = 31.5 bits (68), Expect = 1.0
Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%)
Query: 188 CTCDPGYKN---IDDVC--VPKCLDCRNGEC--VAPND-----CLCHDNYAMSNGTCAP 234
C C GY+ I D C + +CLD C + N C CH M NGTC P
Sbjct: 71 CNCSHGYEGNPYIKDGCEDINECLDNVTYPCPGICNNTMGSFTCSCHQGNYMENGTCIP 129
>01_01_0153 - 1352982-1353731
Length = 249
Score = 34.3 bits (75), Expect = 0.14
Identities = 26/90 (28%), Positives = 36/90 (40%), Gaps = 11/90 (12%)
Query: 158 VCPDGYYN-DPVECSPRCERCVNGTCTEPGLCTC--DPGYKNIDDV--CVPKCLDCRNGE 212
+C D Y+ DP P C G C + C P + +D+V C C DC+ E
Sbjct: 166 ICEDIYWGADP---GPFCTPRPWGDCCDKAFCNKMNPPTCRCMDEVKECADACKDCQRVE 222
Query: 213 CVAPNDCLCHDNYAMSNGTCAPVCRRACTN 242
P +C D + G PVC+ N
Sbjct: 223 SSEPPRYVCKDRF---TGHPGPVCKPRAEN 249
Score = 33.5 bits (73), Expect = 0.25
Identities = 37/146 (25%), Positives = 56/146 (38%), Gaps = 21/146 (14%)
Query: 165 NDPV-ECSPRCERCV-------NG---TCTEPGLCTCDPGYK---NIDDVCVP---KCLD 207
ND V +C+ C+ CV NG C++ T DPG K +D + + KC D
Sbjct: 64 NDEVKQCAAACKECVEAPGGDFNGGAFVCSD-WFSTVDPGPKCTAALDGLSMERPWKCCD 122
Query: 208 CRNGECVAPNDCLCHDNYAMSNGTCAPVCRRACTNGACSEPDKCTCDDGYRLSPEDPFVC 267
P+ N + C C+ +C P K C+D Y + PF
Sbjct: 123 NIKRLPTKPDPPQWRCNDELEPSQCTAACK-SCREAPGPFPGKLICEDIYWGADPGPFCT 181
Query: 268 LPVCSERCVNSHCS--SPNTCTCFKD 291
+ C + C+ +P TC C +
Sbjct: 182 PRPWGDCCDKAFCNKMNPPTCRCMDE 207
>01_01_0151 - 1346942-1347682
Length = 246
Score = 34.3 bits (75), Expect = 0.14
Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 11/90 (12%)
Query: 158 VCPDGYYN-DPVECSPRCERCVNGTCTEPGLCTC--DPGYKNIDDV--CVPKCLDCRNGE 212
+C D Y+ DP P C G C + C P + +D+V C C DC+ E
Sbjct: 163 ICEDVYWGADP---GPLCTPRPWGKCCDKAFCNKMNPPTCRCMDEVNKCAAACKDCQRVE 219
Query: 213 CVAPNDCLCHDNYAMSNGTCAPVCRRACTN 242
P +C D + G P+C+ N
Sbjct: 220 SSEPPRYVCKDRF---TGQPGPMCKPRAEN 246
Score = 33.1 bits (72), Expect = 0.33
Identities = 37/149 (24%), Positives = 56/149 (37%), Gaps = 23/149 (15%)
Query: 165 NDPV-ECSPRCERCVNGTCTEP-GLCTCDPGYKNIDD--VCVP----------KCLDC-- 208
ND V +CS C+ CV P G C Y +D +C KC D
Sbjct: 63 NDEVKQCSAACKECVEAPGDFPRGAFVCRDWYSTVDPGHMCTAPDQPTTKRPWKCCDSIV 122
Query: 209 RNGECVAPNDCLCHDNYAMSNGTCAPVCRRACTNGACSEPDKCTCDDGYRLSPEDPFVCL 268
+ + + P C D + G C C+ +C P C+D Y + P +C
Sbjct: 123 QLPQRIFPPFWRCDDE--LEPGKCTAACK-SCREAPGPFPGPLICEDVYWGADPGP-LCT 178
Query: 269 PVCSERCVN-SHCSSPN--TCTCFKDYER 294
P +C + + C+ N TC C + +
Sbjct: 179 PRPWGKCCDKAFCNKMNPPTCRCMDEVNK 207
>09_02_0533 -
10325681-10326211,10326260-10326328,10326758-10326855,
10326968-10327117,10327848-10327976,10328063-10328999
Length = 637
Score = 33.1 bits (72), Expect = 0.33
Identities = 35/121 (28%), Positives = 47/121 (38%), Gaps = 17/121 (14%)
Query: 151 NGSQCAPVCPDGYYN-DPVECS----PRCERCVNGTCTEPGL---CTCDPGYKNIDDVCV 202
N Q P D Y + DP EC+ P C N C L C C GY+ +
Sbjct: 251 NIPQALPALLDWYISSDPSECTYESAPDC-LSANSFCHAYDLGYKCHCSDGYQG-NPYIR 308
Query: 203 PKCLDCRNGECVAPNDCLCHDNYAMSNGTCAPVC-----RRACTNGACSEPDKCTCDDGY 257
C D EC +P D C+ N + G+ C R A T C + D+C + Y
Sbjct: 309 GGCHDI--DECKSPQDYSCYGNCNNTPGSHICDCPRGYERNASTPNGCKDIDECGHRETY 366
Query: 258 R 258
+
Sbjct: 367 Q 367
Score = 32.7 bits (71), Expect = 0.44
Identities = 26/81 (32%), Positives = 34/81 (41%), Gaps = 13/81 (16%)
Query: 233 APVCRRACTNGACSEPD---KCTCDDGYRLSP------EDPFVCLPVCSERCVNSHCSSP 283
AP C A N C D KC C DGY+ +P D C C + ++P
Sbjct: 276 APDCLSA--NSFCHAYDLGYKCHCSDGYQGNPYIRGGCHDIDECKSPQDYSCYGNCNNTP 333
Query: 284 NT--CTCFKDYERNDTNSNVC 302
+ C C + YERN + N C
Sbjct: 334 GSHICDCPRGYERNASTPNGC 354
>03_05_1019 +
29736644-29736709,29737156-29737515,29737595-29737735,
29737912-29738044,29738344-29738457,29738553-29738701,
29740815-29740907,29741019-29741079,29741180-29741512,
29742149-29742224,29742322-29742421,29743300-29743369,
29743987-29744082,29744355-29744402,29744427-29744658,
29745186-29745246,29745265-29745375
Length = 747
Score = 31.9 bits (69), Expect = 0.76
Identities = 30/114 (26%), Positives = 43/114 (37%), Gaps = 26/114 (22%)
Query: 134 SCTDFNVC---TCVNNTIALNGSQCAPVCPD--GYYNDPV---ECSPRCERCVNGTCTEP 185
S T N C C NN++ + CP G P C +C +G C
Sbjct: 524 SMTQGNGCYQHRCTNNSLEVAVDGIWKSCPQTGGPVQFPGFNGSCPAKCTG--HGICKAN 581
Query: 186 GLCTCDPGYKNID---DVCVPKC-------------LDCRNGECVAPNDCLCHD 223
G+C C+ G+ ID VC +C C+ G + P+ +CHD
Sbjct: 582 GICECESGWTGIDCSTAVCDEQCSLHGGVCDNDYAGYTCQKGSAILPSLSMCHD 635
Score = 29.9 bits (64), Expect = 3.1
Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 3/26 (11%)
Query: 302 CYKKCDGACENGRCSLDGACECDSGY 327
C KC G +G C +G CEC+SG+
Sbjct: 568 CPAKCTG---HGICKANGICECESGW 590
>03_02_0372 +
7864015-7864065,7864167-7864208,7864292-7864322,
7864472-7864653
Length = 101
Score = 31.5 bits (68), Expect = 1.0
Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 10/81 (12%)
Query: 151 NGSQCAPVCPDGYYNDPVECSPRCE-RCVNGTCTEPGLCTCDPGYKNIDDVCVPKCLDCR 209
NG PV +G + EC +C+ RC EP L C+ +C KCL
Sbjct: 25 NGGFYRPVGAEGSVSIE-ECPQKCDYRCSATKRQEPCLKYCN--------ICCQKCLCVP 75
Query: 210 NGECVAPNDCLCHDNYAMSNG 230
+G +C C++N S G
Sbjct: 76 SGTSGNKEECPCYNNLKSSQG 96
>01_01_0150 - 1344247-1345011
Length = 254
Score = 31.5 bits (68), Expect = 1.0
Identities = 21/70 (30%), Positives = 27/70 (38%), Gaps = 5/70 (7%)
Query: 221 CHDNYAMSNGTCAPVCRRACTNGACSEPDKCTCDDGYRLSPEDPFVCLPVCSERCVNSHC 280
C D + G C C+ AC P CDD Y + PF + C N+ C
Sbjct: 142 CDDE--LKPGQCFAACK-ACREAPGPFPGPLICDDVYWGADPGPFCTPRPWGDCCDNTTC 198
Query: 281 --SSPNTCTC 288
S P C+C
Sbjct: 199 TKSIPPICSC 208
Score = 31.1 bits (67), Expect = 1.3
Identities = 41/143 (28%), Positives = 48/143 (33%), Gaps = 23/143 (16%)
Query: 152 GSQCAPVCPDGYYN-DPVE-CSPRCERCVNGTCTEPGLCTCD----------PGYKNIDD 199
G A VC D Y DP + C+P E T P C CD P + DD
Sbjct: 86 GGGAALVCRDWYSTEDPGKPCTPEREWPERTTKKRPWKC-CDNIRRLPPRIHPPFWRCDD 144
Query: 200 V-----CVPKCLDCRNGECVAPNDCLCHDNY--AMSNGTCAP-VCRRACTNGACSE--PD 249
C C CR P +C D Y A C P C N C++ P
Sbjct: 145 ELKPGQCFAACKACREAPGPFPGPLICDDVYWGADPGPFCTPRPWGDCCDNTTCTKSIPP 204
Query: 250 KCTCDDGYRLSPEDPFVCLPVCS 272
C+C D C PV S
Sbjct: 205 ICSCGDKVAACDGACKDCQPVAS 227
>08_01_0764 -
7332969-7333870,7334044-7334369,7334712-7335384,
7336195-7336219
Length = 641
Score = 31.1 bits (67), Expect = 1.3
Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 4/93 (4%)
Query: 220 LCHDNYAMSNGTCAPVCRRACTNGACSEPDKCTCDDGYRLSP-EDPFVCLPVCSERCVNS 278
+C + A S C V +A N + +C+C ++ +DP + L VCS S
Sbjct: 128 MCREAQAGSTAVCRNVACQATLNSGDAYCKRCSCCICHKYDENKDPSLWL-VCSSDTPYS 186
Query: 279 HCSSPNTC--TCFKDYERNDTNSNVCYKKCDGA 309
S +C C ++ N C KK DG+
Sbjct: 187 GYSCGTSCHLKCALKNKKAGIFKNGCNKKSDGS 219
>09_03_0111 -
12440818-12441129,12441242-12441585,12441663-12441989,
12443444-12443602,12443687-12443784,12444745-12444821
Length = 438
Score = 30.7 bits (66), Expect = 1.8
Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
Query: 274 RCVNSHCSSPNTCTCFKDYERNDTNSNVCYKKCDGACENGRCSLDGACECDSGYILSNGT 333
RC SH N + N+ N Y C G C+N S D C C G + NG
Sbjct: 40 RCKCSHGYEGNPYIKDGCKDINECLDNATYP-CMGICKNTIGSFD--CSCYPGSYMKNGF 96
Query: 334 CIRN 337
C+ N
Sbjct: 97 CLPN 100
Score = 29.5 bits (63), Expect = 4.1
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 12/59 (20%)
Query: 188 CTCDPGYKN---IDDVC--VPKCLDCRNGEC-------VAPNDCLCHDNYAMSNGTCAP 234
C C GY+ I D C + +CLD C + DC C+ M NG C P
Sbjct: 41 CKCSHGYEGNPYIKDGCKDINECLDNATYPCMGICKNTIGSFDCSCYPGSYMKNGFCLP 99
>12_01_0913 +
8882193-8883510,8887633-8887865,8889619-8889871,
8891281-8891470,8891641-8891773,8891797-8891886
Length = 738
Score = 30.3 bits (65), Expect = 2.3
Identities = 31/113 (27%), Positives = 44/113 (38%), Gaps = 13/113 (11%)
Query: 128 ACDSYSSCTDFNVCTCVNNTIALNGSQC----APVCPDGYYNDPVECSPRCERCVNGTCT 183
+CDSY+ C F +C +N A + +C +P P + E S C R V C
Sbjct: 304 SCDSYAKCGAFGLCD--SNAGATSICRCVKGFSPASPAEW--SMREYSGGCRRDVALDCG 359
Query: 184 EPGLCTCD----PGYKNIDDVCVPKCLDCRNGECVAPNDCLCHDNYAMSNGTC 232
G P +N K +CR CVA C+ + +S G C
Sbjct: 360 TDGFAVLRGVKLPDTRNASVDMGVKLDECR-ARCVANCSCVAYAAADLSGGGC 411
>09_02_0045 + 3479503-3480285
Length = 260
Score = 30.3 bits (65), Expect = 2.3
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Query: 122 EPTCS---PACDSYSSCTDFNVCTCVNNTIALNGSQ 154
EP+CS P+ + C D ++ C N+IAL+G Q
Sbjct: 186 EPSCSKIVPSNEPCVRCKDIDINACATNSIALSGLQ 221
>06_01_1083 - 8859190-8859450,8859555-8859626
Length = 110
Score = 30.3 bits (65), Expect = 2.3
Identities = 22/71 (30%), Positives = 28/71 (39%), Gaps = 11/71 (15%)
Query: 167 PVECSPRCE-RCVNGTCTEPGLCTCDPGYKNIDDVCVPKCLDCRNGECVAPNDCLCHDNY 225
P ECSP+C RC N + L C+ C KCL G C C++N+
Sbjct: 49 PWECSPKCAGRCSNTQYKKACLTFCNK--------CCAKCLCVPPGTYGNKGACPCYNNW 100
Query: 226 AMSNGTCAPVC 236
G P C
Sbjct: 101 KTKEG--GPKC 109
>04_04_1268 -
32262994-32263017,32263411-32263488,32263653-32263800,
32263890-32264127,32264210-32264420,32264499-32264680,
32264765-32264866,32265009-32266317,32266906-32266988,
32267436-32267559
Length = 832
Score = 30.3 bits (65), Expect = 2.3
Identities = 33/111 (29%), Positives = 40/111 (36%), Gaps = 12/111 (10%)
Query: 123 PTCSPACDSYSSCTDFNVCTCVNNTIALNGSQCAPVCPDGYYNDPVECSPRCERCVNGTC 182
P CD Y SC F C + T + Q CPDG+ + S C R C
Sbjct: 364 PAAIGDCDPYGSCGPFGYC---DFTSVIPRCQ----CPDGFEPNGSNSSSGCRRKQQLRC 416
Query: 183 TEPGLCTCDPGYKNIDDVCVPKCLDCRNGECVA--PNDCLCHDNYAMSNGT 231
E PG K D + D EC A +C C YA +N T
Sbjct: 417 GEGNHFMTMPGMKLPDKFFYVQ--DRSFEECAAECSRNCSC-TAYAYTNLT 464
>11_08_0004 +
27518384-27519018,27519147-27519397,27520437-27520559,
27523499-27524529
Length = 679
Score = 29.9 bits (64), Expect = 3.1
Identities = 26/71 (36%), Positives = 30/71 (42%), Gaps = 11/71 (15%)
Query: 97 VNGTCEAPEVCTCLEPLVLRRGHCVEPTCSPACDSYSSCTDFNVCTCVNNTIALNGSQCA 156
VN T E V T L+ + R G C T +PAC S S CVN A NG
Sbjct: 229 VNSTGER-RVSTVLDWAIRRNGSCSSATGAPACVSAHS-------YCVN---ATNGDGYL 277
Query: 157 PVCPDGYYNDP 167
C GY +P
Sbjct: 278 CNCSTGYAGNP 288
>10_08_0333 - 16850267-16851802
Length = 511
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 225 YAMSNGTCAPVCRRACTNG--ACSEPDKCTCDDGY 257
Y+ ++G C P +CTN A E D TC+D Y
Sbjct: 416 YSHNSGLCGPPLNISCTNASVASDERDCRTCEDQY 450
>04_04_1263 - 32207636-32207938,32208020-32208170,32208263-32208500,
32208604-32208814,32208927-32209108,32209196-32209297,
32210002-32211187,32212103-32212499,32212551-32212582,
32212885-32213157,32213307-32213394,32213486-32213723,
32213824-32214034,32214119-32214300,32214378-32214479,
32214801-32216224,32216751-32216822,32217688-32217719,
32218186-32218263,32218425-32218512,32218608-32218845,
32219060-32219162,32219386-32219558,32219644-32219745,
32219825-32220606,32220659-32221012,32224055-32224140,
32224250-32224400,32224534-32224771,32224876-32225119,
32225190-32225368,32225577-32225675,32225835-32227083
Length = 3195
Score = 29.9 bits (64), Expect = 3.1
Identities = 42/151 (27%), Positives = 58/151 (38%), Gaps = 20/151 (13%)
Query: 123 PTCSPACDSYSSCTDFNVCTCVNNTIALNGSQCAPVCPDGYYNDPVECSPR-CERCVNGT 181
P+ + CD Y+SC F C + T A+ QC DG+ D S R C R
Sbjct: 1761 PSPTIVCDPYASCGPFGYC---DATAAIPRCQCL----DGFEPDGSNSSSRGCRRKQQLR 1813
Query: 182 CTEPGLCTCDPGYKNIDDVCVP-KCLDCRN---GECVA--PNDCLCHDNYAMSNGTCAPV 235
C D + + + VP K L RN EC A +C C YA +N T A
Sbjct: 1814 CRGR-----DDRFVTMAGMKVPDKFLHVRNRSFDECAAECSRNCSC-TAYAYANLTGADQ 1867
Query: 236 CRRACTNGACSEPDKCTCDDGYRLSPEDPFV 266
R +G ++ + + L D V
Sbjct: 1868 ARCLLWSGELADTGRANIGENLYLRLADSTV 1898
>01_06_0916 +
32950575-32950656,32952061-32952272,32952408-32952448,
32952916-32952959,32953259-32953561,32954145-32954302,
32954849-32954965,32955562-32955747,32955872-32956031,
32956079-32956151,32958613-32958889,32959024-32959099,
32960653-32960720,32961270-32961361,32961505-32961578,
32961777-32961820,32962155-32962206,32962585-32962704,
32962777-32962889,32963023-32963110,32963492-32963577,
32964172-32964258,32964491-32964594,32964996-32965098,
32965250-32965345,32965456-32965645,32965777-32965838,
32966014-32966118,32966782-32966983,32967092-32967300,
32968510-32968673,32968799-32968850,32968935-32969021,
32969319-32969441,32969567-32969605,32969606-32969860
Length = 1447
Score = 29.9 bits (64), Expect = 3.1
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 40 QRTRLVYNKKRCRGKTNSGSCVITESYVSIEKSQSCKTGWIYEAKTDS-CVPK 91
+R R+++ K+ +G T+S + +Y + S WI +A T+ C+PK
Sbjct: 883 ERVRILWESKKFKGSTDSVEPWYSTAYSVENVTPSMIQQWIQKAPTEKLCIPK 935
>09_04_0479 -
17948043-17949037,17949554-17949715,17949809-17950262,
17952895-17953326
Length = 680
Score = 29.5 bits (63), Expect = 4.1
Identities = 21/78 (26%), Positives = 30/78 (38%), Gaps = 14/78 (17%)
Query: 139 NVCTCVNNTIALNGSQCAPVCPDGYYNDPV---------ECSPRCERCVNGTCTEP---G 186
N C++N G +C C +GY +P EC G CT
Sbjct: 262 NNSQCIDNLTNAQGYRCK--CSNGYEGNPYIKDGCKDIDECLNNATYPCKGICTNTLGNF 319
Query: 187 LCTCDPGYKNIDDVCVPK 204
C+C PG ++ C+PK
Sbjct: 320 TCSCSPGSYMMNGDCMPK 337
Score = 28.3 bits (60), Expect = 9.4
Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 15/112 (13%)
Query: 224 NYAMSNGTCAPVCRRACTNGACSEPDKCTCDDGYRLSPEDPFVCLPVCSERCVNSHCSSP 283
++A+++ TC RR T+ AC + C D L+ + C +C N + +P
Sbjct: 239 DWAITSKTCTE-SRRNKTSYACIS-NNSQCIDN--LTNAQGYRC------KCSNGYEGNP 288
Query: 284 NTCTCFKDYERNDTNSNVCYKKCDGACENGRCSLDGACECDSGYILSNGTCI 335
KD + + +N Y C G C N + C C G + NG C+
Sbjct: 289 YIKDGCKDID--ECLNNATYP-CKGICTNTLGNF--TCSCSPGSYMMNGDCM 335
>04_03_0618 -
18071612-18072795,18073007-18073072,18074101-18074175,
18074234-18074963
Length = 684
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/28 (46%), Positives = 15/28 (53%)
Query: 287 TCFKDYERNDTNSNVCYKKCDGACENGR 314
T FK Y + N+ V KKC G EN R
Sbjct: 376 TVFKGYNLDQVNNPVAIKKCKGFDENSR 403
>09_04_0472 -
17895285-17896459,17897113-17897271,17897374-17897794,
17898520-17898552,17898902-17899384
Length = 756
Score = 29.1 bits (62), Expect = 5.4
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 5/64 (7%)
Query: 274 RCVNSHCSSPNTCTCFKDYERNDTNSNVCYKKCDGACENGRCSLDGACECDSGYILSNGT 333
+C + + +P KD N+ N Y C G C+N + C C G + NG
Sbjct: 296 KCSDGYEGNPYVKDGCKDI--NECLDNATYP-CPGICKNTLGNF--TCSCYPGNYMMNGI 350
Query: 334 CIRN 337
CI N
Sbjct: 351 CIPN 354
>05_03_0439 +
14028234-14028287,14029394-14029468,14029562-14029642,
14029778-14029934,14030056-14030060,14030152-14030226,
14030332-14030457,14030604-14030822,14031293-14031406,
14031498-14031533,14031630-14031764
Length = 358
Score = 29.1 bits (62), Expect = 5.4
Identities = 31/107 (28%), Positives = 40/107 (37%), Gaps = 23/107 (21%)
Query: 114 VLRRGHCVEPTCSPACDSYSS--CTDFN--VCTCVNNTIALNGSQCAPVCPDGY------ 163
+L +GHC A + C FN + VN+ +A G C C GY
Sbjct: 121 ILDQGHCGSCWAFGAVECLQDRFCIHFNMNISLSVNDLVACCGFMCGDGCDGGYPIMAWR 180
Query: 164 ---YNDPV--ECSPRCERCVNGTCTEPGLCTCDPGYKNIDDVCVPKC 205
N V EC P ++ C PG C+P Y VC KC
Sbjct: 181 YFVRNGVVTDECDPYFDQV---GCKHPG---CEPAYPT--PVCEKKC 219
>01_01_0491 +
3629025-3629051,3629679-3629778,3629947-3630015,
3630282-3630559
Length = 157
Score = 29.1 bits (62), Expect = 5.4
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 273 ERCVNSHCSSPNTCTCFKDYER 294
ERC++S S C CFK +R
Sbjct: 17 ERCISSQAESDGYCACFKGLQR 38
>10_01_0054 - 773395-774518,776957-777124,777455-778376
Length = 737
Score = 28.7 bits (61), Expect = 7.1
Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 4/48 (8%)
Query: 177 CVNGTCTEPGLCTCDPGYKN--IDDVCVPKCLDCRNGECVAPNDCLCH 222
CVN T C C GY+ DD C D EC PN CH
Sbjct: 276 CVNSTNGLGYYCNCSSGYEGNPYDDDPNKGCKDI--DECAHPNKYPCH 321
>04_04_1523 - 34148407-34150224
Length = 605
Score = 28.7 bits (61), Expect = 7.1
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 276 VNSHCSSPNTCTCFKDYERNDTNSNVCYKKCDGAC 310
+N CS+P C KD+E D + V C +C
Sbjct: 97 INRSCSTPCLCPVSKDFEHKDRSGLVEMLGCSISC 131
>04_03_0130 - 11622139-11623325,11626144-11627116
Length = 719
Score = 28.7 bits (61), Expect = 7.1
Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 4/30 (13%)
Query: 251 CTCDDGYR----LSPEDPFVCLPVCSERCV 276
C C G+R L PEDP C +CS V
Sbjct: 303 CNCSKGFRGNPYLHPEDPSSCQGICSSTVV 332
>02_02_0030 - 6207784-6208154,6208286-6211310
Length = 1131
Score = 28.7 bits (61), Expect = 7.1
Identities = 12/33 (36%), Positives = 15/33 (45%)
Query: 241 TNGACSEPDKCTCDDGYRLSPEDPFVCLPVCSE 273
+NG + D YRL DP LP+C E
Sbjct: 725 SNGVFGNASRAILDGNYRLCVNDPGYSLPLCRE 757
>11_06_0368 + 22756988-22758205
Length = 405
Score = 28.3 bits (60), Expect = 9.4
Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Query: 246 SEPDKCTCDDGYRLSPEDPFVCLPVCSERCVNSH-CSSP 283
S P++ Y P DP C CS CV H C SP
Sbjct: 35 SAPERDQTAAPYGTVPPDPLSCATDCSPDCVFYHLCPSP 73
>10_01_0296 + 3069605-3070535,3071127-3071294,3075307-3076454
Length = 748
Score = 28.3 bits (60), Expect = 9.4
Identities = 27/95 (28%), Positives = 36/95 (37%), Gaps = 14/95 (14%)
Query: 243 GACSEPDKCTCDDGYRLSPEDPFVCLPVCSERCVNSHCSSPNTCTCFKDYERND------ 296
G S C + P + + C+ SE CVNS C C K YE N
Sbjct: 252 GNSSASSSCPAPEVREKMPPE-YACVSDNSE-CVNSTNGPGYYCKCSKGYEGNPYLVGGC 309
Query: 297 TNSNVCYKK----CDGACENGRCSLDGACECDSGY 327
+ + C + C G C N D C+C +GY
Sbjct: 310 NDIDECARSDEYPCHGDCRN--TVGDYHCKCRTGY 342
>07_01_0890 -
7437901-7439339,7439452-7439657,7439841-7440171,
7440268-7440405,7440619-7440874,7440963-7441318,
7441421-7441709
Length = 1004
Score = 28.3 bits (60), Expect = 9.4
Identities = 11/26 (42%), Positives = 12/26 (46%)
Query: 190 CDPGYKNIDDVCVPKCLDCRNGECVA 215
CD G + D DCRNG C A
Sbjct: 969 CDMGAAEVSDSSPETAKDCRNGRCCA 994
>06_01_1133 +
9364842-9364850,9364929-9365048,9365157-9365476,
9366267-9366428,9367151-9367235,9367352-9367501,
9367588-9367635,9367705-9367773,9367897-9368600,
9369426-9369561,9369636-9369856,9370355-9370486,
9371316-9371406,9371878-9371925,9372004-9372132,
9372357-9372626
Length = 897
Score = 28.3 bits (60), Expect = 9.4
Identities = 15/44 (34%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Query: 170 CSPRCERCVNGTCTEPGLCTCDPGYKNIDDVCVPKCLDCRNGEC 213
C +C NGTC E C C KN C CR+ +C
Sbjct: 657 CGKQCPCLTNGTCCEK-YCGCPKMCKNRFRGCHCAKSQCRSRQC 699
>04_03_0602 - 17884667-17885817,17885946-17886113,17886413-17887313
Length = 739
Score = 28.3 bits (60), Expect = 9.4
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Query: 252 TCDDGYRLSPEDPFVCLPVCSERCVNSHCSSPNTCTCFKDYERN 295
+C++ ++ D + C SE C NS TC C K YE N
Sbjct: 250 SCEEAWKKM--DSYACKSTNSE-CFNSTNGPGYTCNCSKGYEGN 290
>01_06_0193 - 27359575-27361962
Length = 795
Score = 28.3 bits (60), Expect = 9.4
Identities = 13/22 (59%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
Query: 179 NGTCT-EPGL-CTCDPGYKNID 198
NG C PGL CTC PGY+ D
Sbjct: 291 NGICEYSPGLRCTCPPGYEMTD 312
>01_01_1043 + 8228201-8228209,8228364-8228439,8228527-8228903
Length = 153
Score = 28.3 bits (60), Expect = 9.4
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 6/46 (13%)
Query: 247 EPDKCTCDDGYRLSPEDPFVCLPVCSERCVNSHCSSPNTCTCFKDY 292
+ D C C E C+ VC+ C +S CS P+ C +K Y
Sbjct: 89 DDDPCQCQ-----CKEAECACVKVCAASCHHSPCSLPD-CYFYKSY 128
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.322 0.137 0.477
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,558,149
Number of Sequences: 37544
Number of extensions: 608724
Number of successful extensions: 1261
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 1219
Number of HSP's gapped (non-prelim): 78
length of query: 339
length of database: 14,793,348
effective HSP length: 82
effective length of query: 257
effective length of database: 11,714,740
effective search space: 3010688180
effective search space used: 3010688180
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 60 (28.3 bits)
- SilkBase 1999-2023 -