GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002382-TA|BGIBMGA002382-PA|undefined
         (597 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      33   0.004
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      33   0.004
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    27   0.28 
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           27   0.37 
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    26   0.85 
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       25   1.5  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    25   1.5  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    25   1.5  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           25   2.0  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    24   2.6  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    24   2.6  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       24   3.4  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    24   3.4  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    24   3.4  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    24   3.4  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        23   4.5  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    23   6.0  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    23   6.0  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   7.9  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    23   7.9  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 33.5 bits (73), Expect = 0.004
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)

Query: 80  DFDKLRQNINKADKNEPKVDEDEKHIS-KNNRSDDKNDQDVENTNNK 125
           +FD L  N  +++K E K D+    +  KNN  D KN+QD  N   K
Sbjct: 429 NFDALIVNEMRSEKPESKKDKKGSQVDHKNNLGDSKNNQDGNNGEKK 475



 Score = 25.0 bits (52), Expect = 1.5
 Identities = 34/131 (25%), Positives = 53/131 (40%), Gaps = 19/131 (14%)

Query: 93  KNEPKVDEDEKHISKNNRSDDKN-----------DQDVENTNNKLDEQEMSN---KTDSG 138
           KNE   DE + H SKN  ++  N           D      NN  D + +S     T  G
Sbjct: 337 KNE---DETKNHYSKNTYNEQGNKLADLYKSLGPDSVYSFINNLTDRKLLSAWYMNTVLG 393

Query: 139 SKNDKNST-KVDETEAKIANNTHNSNNDVHHDSENNKNRTVDNQEEHEWYQPKNDEVGPK 197
            +N   +  K D ++ +I NN  +      +    N +  + N+   E  + K D+ G +
Sbjct: 394 HQNPYLALPKTDSSDNRILNNLLDKKPYSTYKFPTNFDALIVNEMRSEKPESKKDKKGSQ 453

Query: 198 AD-QNEDQDSK 207
            D +N   DSK
Sbjct: 454 VDHKNNLGDSK 464



 Score = 24.6 bits (51), Expect = 2.0
 Identities = 17/80 (21%), Positives = 36/80 (45%), Gaps = 1/80 (1%)

Query: 68  KSNASVHEVVDDDFDKLRQNINKADKNEPKVDEDEKHISKNNRSDDKNDQDVENTNNKLD 127
           K+++S + ++++  DK   +  K   N   +  +E    K     DK    V++ NN L 
Sbjct: 403 KTDSSDNRILNNLLDKKPYSTYKFPTNFDALIVNEMRSEKPESKKDKKGSQVDHKNN-LG 461

Query: 128 EQEMSNKTDSGSKNDKNSTK 147
           + + +   ++G K   +  K
Sbjct: 462 DSKNNQDGNNGEKKKPHIKK 481



 Score = 23.4 bits (48), Expect = 4.5
 Identities = 16/59 (27%), Positives = 23/59 (38%), Gaps = 2/59 (3%)

Query: 306 STQNTQNLD--NENKPNQESKNINETDQLIDSSTQNTQNLNNENKPNQESKNINETDQL 362
           S  N Q LD     + N E  N+N  +QL     +N     N    N  ++  N+   L
Sbjct: 303 SKNNDQCLDLSKTKETNLEKSNLNHNEQLRKYLCKNEDETKNHYSKNTYNEQGNKLADL 361


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 33.5 bits (73), Expect = 0.004
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)

Query: 80  DFDKLRQNINKADKNEPKVDEDEKHIS-KNNRSDDKNDQDVENTNNK 125
           +FD L  N  +++K E K D+    +  KNN  D KN+QD  N   K
Sbjct: 321 NFDALIVNEMRSEKPESKKDKKGSQVDHKNNLGDSKNNQDGNNGEKK 367



 Score = 25.0 bits (52), Expect = 1.5
 Identities = 34/131 (25%), Positives = 53/131 (40%), Gaps = 19/131 (14%)

Query: 93  KNEPKVDEDEKHISKNNRSDDKN-----------DQDVENTNNKLDEQEMSN---KTDSG 138
           KNE   DE + H SKN  ++  N           D      NN  D + +S     T  G
Sbjct: 229 KNE---DETKNHYSKNTYNEQGNKLADLYKSLGPDSVYSFINNLTDRKLLSAWYMNTVLG 285

Query: 139 SKNDKNST-KVDETEAKIANNTHNSNNDVHHDSENNKNRTVDNQEEHEWYQPKNDEVGPK 197
            +N   +  K D ++ +I NN  +      +    N +  + N+   E  + K D+ G +
Sbjct: 286 HQNPYLALPKTDSSDNRILNNLLDKKPYSTYKFPTNFDALIVNEMRSEKPESKKDKKGSQ 345

Query: 198 AD-QNEDQDSK 207
            D +N   DSK
Sbjct: 346 VDHKNNLGDSK 356



 Score = 24.6 bits (51), Expect = 2.0
 Identities = 17/80 (21%), Positives = 36/80 (45%), Gaps = 1/80 (1%)

Query: 68  KSNASVHEVVDDDFDKLRQNINKADKNEPKVDEDEKHISKNNRSDDKNDQDVENTNNKLD 127
           K+++S + ++++  DK   +  K   N   +  +E    K     DK    V++ NN L 
Sbjct: 295 KTDSSDNRILNNLLDKKPYSTYKFPTNFDALIVNEMRSEKPESKKDKKGSQVDHKNN-LG 353

Query: 128 EQEMSNKTDSGSKNDKNSTK 147
           + + +   ++G K   +  K
Sbjct: 354 DSKNNQDGNNGEKKKPHIKK 373



 Score = 23.4 bits (48), Expect = 4.5
 Identities = 16/59 (27%), Positives = 23/59 (38%), Gaps = 2/59 (3%)

Query: 306 STQNTQNLD--NENKPNQESKNINETDQLIDSSTQNTQNLNNENKPNQESKNINETDQL 362
           S  N Q LD     + N E  N+N  +QL     +N     N    N  ++  N+   L
Sbjct: 195 SKNNDQCLDLSKTKETNLEKSNLNHNEQLRKYLCKNEDETKNHYSKNTYNEQGNKLADL 253


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 27.5 bits (58), Expect = 0.28
 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%)

Query: 319 PNQESKNINETDQLIDSSTQNTQNLN-NENKPNQESKNI 356
           P  +S+ IN   Q+   S  NT   + N NKPN    N+
Sbjct: 410 PPMQSQIINPQPQITSPSNTNTSTSSTNSNKPNSSDLNM 448



 Score = 24.2 bits (50), Expect = 2.6
 Identities = 13/32 (40%), Positives = 14/32 (43%), Gaps = 1/32 (3%)

Query: 386 INETDQIIDSSTQNTQNLD-NENKPNQESKNI 416
           IN   QI   S  NT     N NKPN    N+
Sbjct: 417 INPQPQITSPSNTNTSTSSTNSNKPNSSDLNM 448



 Score = 23.4 bits (48), Expect = 4.5
 Identities = 12/32 (37%), Positives = 14/32 (43%), Gaps = 1/32 (3%)

Query: 296 INETDQLIDSSTQNTQNLD-NENKPNQESKNI 326
           IN   Q+   S  NT     N NKPN    N+
Sbjct: 417 INPQPQITSPSNTNTSTSSTNSNKPNSSDLNM 448


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 27.1 bits (57), Expect = 0.37
 Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 6/69 (8%)

Query: 96  PKVDEDEKHISKNNRSDDKNDQDVENTNNKLDEQEMSNKTDSGSKNDKNSTKVDETEAKI 155
           PK   DE+    N  S   N     N NN  +    +N  D  ++N+ +S    ET    
Sbjct: 355 PKRSSDEQQWRNNQPSTSNNRWHNNNGNNSNNHWRKNNPND--NRNNTSSRAQGET---- 408

Query: 156 ANNTHNSNN 164
           + N+ NS N
Sbjct: 409 SRNSKNSGN 417



 Score = 26.2 bits (55), Expect = 0.64
 Identities = 15/70 (21%), Positives = 26/70 (37%)

Query: 81  FDKLRQNINKADKNEPKVDEDEKHISKNNRSDDKNDQDVENTNNKLDEQEMSNKTDSGSK 140
           F K   +  +   N+P    +  H +  N S++   ++  N N          +T   SK
Sbjct: 354 FPKRSSDEQQWRNNQPSTSNNRWHNNNGNNSNNHWRKNNPNDNRNNTSSRAQGETSRNSK 413

Query: 141 NDKNSTKVDE 150
           N  N   V +
Sbjct: 414 NSGNGGGVQD 423



 Score = 23.0 bits (47), Expect = 6.0
 Identities = 11/65 (16%), Positives = 27/65 (41%)

Query: 111 SDDKNDQDVENTNNKLDEQEMSNKTDSGSKNDKNSTKVDETEAKIANNTHNSNNDVHHDS 170
           +D +   + +     +D  E++      ++ +    +  + +    N    SNN  H+++
Sbjct: 321 TDHQRRNEPKRPRPNIDRHEVTRPAAPANRGNGFPKRSSDEQQWRNNQPSTSNNRWHNNN 380

Query: 171 ENNKN 175
            NN N
Sbjct: 381 GNNSN 385


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 25.8 bits (54), Expect = 0.85
 Identities = 13/56 (23%), Positives = 25/56 (44%)

Query: 124 NKLDEQEMSNKTDSGSKNDKNSTKVDETEAKIANNTHNSNNDVHHDSENNKNRTVD 179
           NK D+ + +  +DS  +      K D+T+      +  +  D+  D  N+ +R  D
Sbjct: 154 NKTDDDDDALVSDSDDREKDEEDKRDDTDMHGRIKSERNGKDLDDDDMNDDDRKDD 209



 Score = 25.0 bits (52), Expect = 1.5
 Identities = 16/83 (19%), Positives = 36/83 (43%), Gaps = 2/83 (2%)

Query: 81  FDKLRQNINKADKN--EPKVDEDEKHISKNNRSDDKNDQDVENTNNKLDEQEMSNKTDSG 138
           F   R+ + K +K   EPK   D+   +  + SDD+   + +  ++      + ++ +  
Sbjct: 135 FANARRRLKKENKMTWEPKNKTDDDDDALVSDSDDREKDEEDKRDDTDMHGRIKSERNGK 194

Query: 139 SKNDKNSTKVDETEAKIANNTHN 161
             +D +    D  +  + NN H+
Sbjct: 195 DLDDDDMNDDDRKDDLLGNNMHH 217


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 9/30 (30%), Positives = 17/30 (56%)

Query: 140 KNDKNSTKVDETEAKIANNTHNSNNDVHHD 169
           + +++  +  E + KI   TH+S +  HHD
Sbjct: 81  EQERHKQQQQEKQQKIEQQTHSSIHQHHHD 110


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 9/30 (30%), Positives = 17/30 (56%)

Query: 140 KNDKNSTKVDETEAKIANNTHNSNNDVHHD 169
           + +++  +  E + KI   TH+S +  HHD
Sbjct: 232 EQERHKQQQQEKQQKIEQQTHSSIHQHHHD 261


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 9/30 (30%), Positives = 17/30 (56%)

Query: 140 KNDKNSTKVDETEAKIANNTHNSNNDVHHD 169
           + +++  +  E + KI   TH+S +  HHD
Sbjct: 291 EQERHKQQQQEKQQKIEQQTHSSIHQHHHD 320


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 15/82 (18%), Positives = 34/82 (41%)

Query: 112 DDKNDQDVENTNNKLDEQEMSNKTDSGSKNDKNSTKVDETEAKIANNTHNSNNDVHHDSE 171
           D +ND    +    L E    N +    ++ +            ++ T + +++    + 
Sbjct: 157 DHENDTTGNSGEGSLQENRYYNNSPDQYQSYQILLPTPTCSEASSSPTPSHSSESSFSAA 216

Query: 172 NNKNRTVDNQEEHEWYQPKNDE 193
           ++   T+ +QE  E Y+PK+ E
Sbjct: 217 SSYTNTIYHQENFENYEPKSPE 238


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)

Query: 545 ACHKLSEMFQSGRYYL-IMVMGWVYNLMSVLRLNIIEAYKL 584
           ACH L+  F S  Y+L I+ + ++  L+ +L L  I A  L
Sbjct: 224 ACHTLANTFWSALYFLTIIFLFFIIPLIILLILYCIIAKNL 264


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 13/43 (30%), Positives = 22/43 (51%)

Query: 124 NKLDEQEMSNKTDSGSKNDKNSTKVDETEAKIANNTHNSNNDV 166
           N LDE+E S+     +   + S+ V   + ++ +N  N NN V
Sbjct: 125 NVLDEEEKSSTKHYAALLTERSSLVLRNDFRLMSNNLNKNNVV 167


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 18/79 (22%), Positives = 35/79 (44%), Gaps = 8/79 (10%)

Query: 90  KADKNEPKVDEDEKHISKNNRSDDKNDQDVENTNNKLDEQEM-SNKTDSGS------KND 142
           K++K E  ++      +  NR  D N   +      L++  + S+KT   S      K+D
Sbjct: 118 KSEKEEKDMETTLTPCASPNRKPDDNQDHLRRLEMSLEKSGLFSSKTSEHSVDELSGKSD 177

Query: 143 KNSTKVDETEAKIAN-NTH 160
            ++ + DE   ++   N+H
Sbjct: 178 NDAEEYDEQSLRVPKVNSH 196


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 8/81 (9%)

Query: 103 KHISKNNRSDDKNDQDVENT----NNKLDEQ----EMSNKTDSGSKNDKNSTKVDETEAK 154
           K  +   + DD +D+D   +    N KL ++    EMS K+  G +           E  
Sbjct: 60  KRQTLGKQGDDGDDKDSITSDGGKNGKLSDKFLDDEMSKKSCQGCEMPSAGLCGSHDEIP 119

Query: 155 IANNTHNSNNDVHHDSENNKN 175
             ++T  +NN+    + NN N
Sbjct: 120 DISSTRGNNNNTPSATNNNTN 140


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 8/81 (9%)

Query: 103 KHISKNNRSDDKNDQDVENT----NNKLDEQ----EMSNKTDSGSKNDKNSTKVDETEAK 154
           K  +   + DD +D+D   +    N KL ++    EMS K+  G +           E  
Sbjct: 8   KRQTLGKQGDDGDDKDSITSDGGKNGKLSDKFLDDEMSKKSCQGCEMPSAGLCGSHDEIP 67

Query: 155 IANNTHNSNNDVHHDSENNKN 175
             ++T  +NN+    + NN N
Sbjct: 68  DISSTRGNNNNTPSATNNNTN 88


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 8/81 (9%)

Query: 103 KHISKNNRSDDKNDQDVENT----NNKLDEQ----EMSNKTDSGSKNDKNSTKVDETEAK 154
           K  +   + DD +D+D   +    N KL ++    EMS K+  G +           E  
Sbjct: 191 KRQTLGKQGDDGDDKDSITSDGGKNGKLSDKFLDDEMSKKSCQGCEMPSAGLCGSHDEIP 250

Query: 155 IANNTHNSNNDVHHDSENNKN 175
             ++T  +NN+    + NN N
Sbjct: 251 DISSTRGNNNNTPSATNNNTN 271


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 3/50 (6%)

Query: 448 ETDQLIDSSTQNYNVRDENTDNMN-EMMKSATE--HDPLDKMLECCEFFK 494
           ET+ L ++ TQN ++ DE+       M  S T   +  LD + +  + +K
Sbjct: 504 ETNNLSETFTQNLSLMDESEGRQEPNMTDSLTRLANSALDNICQASDMYK 553


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 23.0 bits (47), Expect = 6.0
 Identities = 9/33 (27%), Positives = 16/33 (48%)

Query: 161 NSNNDVHHDSENNKNRTVDNQEEHEWYQPKNDE 193
           +  N+    S N  ++  D+ E HEW    ++E
Sbjct: 95  DDQNESLEASVNENSKNGDDDEGHEWQADVSEE 127


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 23.0 bits (47), Expect = 6.0
 Identities = 11/29 (37%), Positives = 20/29 (68%), Gaps = 3/29 (10%)

Query: 97  KVDEDEKHISKNNRSDDKNDQDVENTNNK 125
           K+D++E H S ++  DD +D D+ N+ N+
Sbjct: 278 KIDKEE-HESMDD--DDDDDDDMSNSENQ 303


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 7/22 (31%), Positives = 13/22 (59%)

Query: 526 FAITLACLLAVGSMLFVFVACH 547
           F I + CL+   +++F F  C+
Sbjct: 536 FIIIIGCLIQFNTIVFAFCYCY 557


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like
          protein protein.
          Length = 160

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 9/41 (21%), Positives = 21/41 (51%)

Query: 45 YSKDCYIEVACLKTTHACNSHPAKSNASVHEVVDDDFDKLR 85
          + + CY+ V   +   +       +N ++ +VV  +FDK++
Sbjct: 36 HKEHCYVLVRLARFRDSVKLSKIPNNVNLMDVVAREFDKIQ 76


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.306    0.124    0.344 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,044
Number of Sequences: 317
Number of extensions: 5298
Number of successful extensions: 52
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 13
Number of HSP's gapped (non-prelim): 42
length of query: 597
length of database: 114,650
effective HSP length: 61
effective length of query: 536
effective length of database: 95,313
effective search space: 51087768
effective search space used: 51087768
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 46 (22.6 bits)