GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002380-TA|BGIBMGA002380-PA|undefined
         (356 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    25   0.83 
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    23   3.4  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    23   3.4  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    23   4.4  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    23   4.4  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    23   4.4  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    22   7.8  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   7.8  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    22   7.8  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 25.0 bits (52), Expect = 0.83
 Identities = 13/40 (32%), Positives = 25/40 (62%), Gaps = 1/40 (2%)

Query: 244 SVFYYLCVVALQYICPVIMMLYL-ALMYKTLGGHAWSSLL 282
           S  Y+L ++ L +I P+I++L L  ++ K L  +A + +L
Sbjct: 234 SALYFLTIIFLFFIIPLIILLILYCIIAKNLMSNAATLVL 273


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 100 YTAIVYIMSEVLRRKQNKVFVLNFNFALPFILVL 133
           YT    I+SEVL+R +    + +F  A+P  L L
Sbjct: 315 YTTREGILSEVLQRPKPFKPITDFELAVPSFLKL 348


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 100 YTAIVYIMSEVLRRKQNKVFVLNFNFALPFILVL 133
           YT    I+SEVL+R +    + +F  A+P  L L
Sbjct: 315 YTTREGILSEVLQRPKPFKPITDFELAVPSFLKL 348


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 100 YTAIVYIMSEVLRRKQNKVFVLNFNFALPFILVL 133
           YT    I+SEVL+R +    + +F  A+P  L L
Sbjct: 315 YTTREGILSEVLQRPKPFKPITDFELAVPNFLKL 348


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 100 YTAIVYIMSEVLRRKQNKVFVLNFNFALPFILVL 133
           YT    I+SEVL+R +    + +F  A+P  L L
Sbjct: 315 YTTREGILSEVLQRPKPFKPITDFELAVPNFLKL 348


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 100 YTAIVYIMSEVLRRKQNKVFVLNFNFALPFILVL 133
           YT    I+SEVL+R +    + +F  A+P  L L
Sbjct: 314 YTTREGILSEVLQRPKPFKPITDFELAVPNFLKL 347


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
          protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 7/16 (43%), Positives = 11/16 (68%)

Query: 45 SKGKKGGKYESNGKPE 60
          S+G++   Y SN KP+
Sbjct: 81 SEGQQNSNYSSNSKPD 96


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 10/27 (37%), Positives = 14/27 (51%)

Query: 244 SVFYYLCVVALQYICPVIMMLYLALMY 270
           SVF +LC   ++Y    I   Y  L+Y
Sbjct: 142 SVFDFLCRHTVEYFQNYIHFFYQLLLY 168


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 11/31 (35%), Positives = 14/31 (45%)

Query: 52  KYESNGKPETFHVPRSLEIQLETAPVTALDV 82
           KYE      T HV   L  Q  T P+T  ++
Sbjct: 164 KYEQACNEFTTHVMNLLREQSRTRPITPKEI 194


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.327    0.138    0.429 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,556
Number of Sequences: 317
Number of extensions: 2897
Number of successful extensions: 17
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 9
length of query: 356
length of database: 114,650
effective HSP length: 58
effective length of query: 298
effective length of database: 96,264
effective search space: 28686672
effective search space used: 28686672
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 44 (21.8 bits)