GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002380-TA|BGIBMGA002380-PA|undefined
         (356 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    26   1.8  
DQ396551-1|ABD60146.1|  354|Anopheles gambiae adipokinetic hormo...    25   4.2  
AY298745-1|AAQ63187.1|  354|Anopheles gambiae G-protein coupled ...    25   4.2  
AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    24   7.4  

>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 25.8 bits (54), Expect = 1.8
 Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 3/39 (7%)

Query: 118 VFVLNFNFALPFILVL-LWVRPITRHYLTARVFSGMEKP 155
           V ++N+NF  P    + +W+R +  HYL A +   M++P
Sbjct: 314 VIIINWNFRGPRTHRMPMWIRSVFLHYLPAMLL--MKRP 350


>DQ396551-1|ABD60146.1|  354|Anopheles gambiae adipokinetic hormone
           receptor protein.
          Length = 354

 Score = 24.6 bits (51), Expect = 4.2
 Identities = 8/27 (29%), Positives = 18/27 (66%)

Query: 239 QKKVASVFYYLCVVALQYICPVIMMLY 265
           ++++  + Y + V+ L Y  P+I++LY
Sbjct: 204 EEEIYQIIYNVLVMCLMYTFPLIVILY 230


>AY298745-1|AAQ63187.1|  354|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 354

 Score = 24.6 bits (51), Expect = 4.2
 Identities = 8/27 (29%), Positives = 18/27 (66%)

Query: 239 QKKVASVFYYLCVVALQYICPVIMMLY 265
           ++++  + Y + V+ L Y  P+I++LY
Sbjct: 204 EEEIYQIIYNVLVMCLMYTFPLIVILY 230


>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 23.8 bits (49), Expect = 7.4
 Identities = 14/41 (34%), Positives = 20/41 (48%)

Query: 111 LRRKQNKVFVLNFNFALPFILVLLWVRPITRHYLTARVFSG 151
           L R ++    LN N    F+L L  V  +  H+LT R  +G
Sbjct: 358 LERYRHGATQLNINLLRHFLLQLTIVAVLFAHWLTTRPPTG 398


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.327    0.138    0.429 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 317,709
Number of Sequences: 2123
Number of extensions: 10973
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 13
Number of HSP's gapped (non-prelim): 4
length of query: 356
length of database: 516,269
effective HSP length: 65
effective length of query: 291
effective length of database: 378,274
effective search space: 110077734
effective search space used: 110077734
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 48 (23.4 bits)