GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002380-TA|BGIBMGA002380-PA|undefined
         (356 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118392-1|AAM48421.1|  496|Drosophila melanogaster RE42071p pro...   157   2e-38
AE014296-1903|AAF50096.2|  496|Drosophila melanogaster CG7638-PA...   157   2e-38
BT022879-1|AAY55295.1|  542|Drosophila melanogaster IP12872p pro...    29   9.8  

>AY118392-1|AAM48421.1|  496|Drosophila melanogaster RE42071p
           protein.
          Length = 496

 Score =  157 bits (382), Expect = 2e-38
 Identities = 77/177 (43%), Positives = 109/177 (61%), Gaps = 12/177 (6%)

Query: 189 FDTLRIVLVVCTAALRVALMPRQLQAYLDIAQRRLDVQKKEAGRITNIDLQKKVASVFYY 248
           F+TLR++LV+    +R ALMP  LQ+YL++A  ++   +KEAGRITN++ ++K++S+FYY
Sbjct: 317 FETLRLLLVIFVVVVRFALMPIYLQSYLNLAHDKIMDLRKEAGRITNVEFKQKISSIFYY 376

Query: 249 LCVVALQYICPVIMMLYLALMYKTLGGHAWSSLLYEXXXXXXXXXXXXXXXXXXX----- 303
           LCVV LQ+  P+I+ LYL LMYK+LGG +WS +  E                        
Sbjct: 377 LCVVTLQFAAPLILCLYLTLMYKSLGGFSWSGIFRESVVLQHECAASETEGAGVAVSQGD 436

Query: 304 -------GAEQYQLAWENLKMVFTTEVCRGVLGFATWWCSFAWFVTTALGAAYQSYF 353
                   A+  Q ++ +LK VF+TEV +G LGFATWW  F  F T++LG  YQSYF
Sbjct: 437 GDFNIIESAQSLQASFSSLKNVFSTEVYKGFLGFATWWSYFTLFATSSLGIVYQSYF 493



 Score =  135 bits (327), Expect = 8e-32
 Identities = 66/116 (56%), Positives = 89/116 (76%), Gaps = 8/116 (6%)

Query: 1   MVSVIQKLG-NYSFAKWLLCSQGLYRYLYPDNNELKNLAGVPKERSKGKKGGKY-ESNGK 58
           MVSVIQKL  +YSFAKW+LC  GLYRYL+P ++EL++  GVPKE  K  KGG+  ++NG 
Sbjct: 14  MVSVIQKLSPHYSFAKWILCRTGLYRYLHPTDDELRSRGGVPKE--KPPKGGRNKQANGS 71

Query: 59  PET----FHVPRSLEIQLETAPVTALDVVHLRFYTEYLWIVDFSLYTAIVYIMSEV 110
                  FH+PRS+E++L T+PV   DVVHLR++TEY W++DFS+YT IVY++SE+
Sbjct: 72  GGAAGAQFHIPRSIEVELLTSPVLERDVVHLRYFTEYQWLLDFSVYTGIVYVVSEL 127



 Score = 60.9 bits (141), Expect = 3e-09
 Identities = 24/38 (63%), Positives = 32/38 (84%)

Query: 120 VLNFNFALPFILVLLWVRPITRHYLTARVFSGMEKPFV 157
           +LN +F LPFILV+LW+RPI+R YLT RVF GM++P +
Sbjct: 275 LLNLSFVLPFILVILWIRPISRDYLTVRVFQGMQQPLL 312


>AE014296-1903|AAF50096.2|  496|Drosophila melanogaster CG7638-PA
           protein.
          Length = 496

 Score =  157 bits (382), Expect = 2e-38
 Identities = 77/177 (43%), Positives = 109/177 (61%), Gaps = 12/177 (6%)

Query: 189 FDTLRIVLVVCTAALRVALMPRQLQAYLDIAQRRLDVQKKEAGRITNIDLQKKVASVFYY 248
           F+TLR++LV+    +R ALMP  LQ+YL++A  ++   +KEAGRITN++ ++K++S+FYY
Sbjct: 317 FETLRLLLVIFVVVVRFALMPIYLQSYLNLAHDKIMDLRKEAGRITNVEFKQKISSIFYY 376

Query: 249 LCVVALQYICPVIMMLYLALMYKTLGGHAWSSLLYEXXXXXXXXXXXXXXXXXXX----- 303
           LCVV LQ+  P+I+ LYL LMYK+LGG +WS +  E                        
Sbjct: 377 LCVVTLQFAAPLILCLYLTLMYKSLGGFSWSGIFRESVVLQHECAASETEGAGVAVSQGD 436

Query: 304 -------GAEQYQLAWENLKMVFTTEVCRGVLGFATWWCSFAWFVTTALGAAYQSYF 353
                   A+  Q ++ +LK VF+TEV +G LGFATWW  F  F T++LG  YQSYF
Sbjct: 437 GDFNIIESAQSLQASFSSLKNVFSTEVYKGFLGFATWWSYFTLFATSSLGIVYQSYF 493



 Score =  135 bits (327), Expect = 8e-32
 Identities = 66/116 (56%), Positives = 89/116 (76%), Gaps = 8/116 (6%)

Query: 1   MVSVIQKLG-NYSFAKWLLCSQGLYRYLYPDNNELKNLAGVPKERSKGKKGGKY-ESNGK 58
           MVSVIQKL  +YSFAKW+LC  GLYRYL+P ++EL++  GVPKE  K  KGG+  ++NG 
Sbjct: 14  MVSVIQKLSPHYSFAKWILCRTGLYRYLHPTDDELRSRGGVPKE--KPPKGGRNKQANGS 71

Query: 59  PET----FHVPRSLEIQLETAPVTALDVVHLRFYTEYLWIVDFSLYTAIVYIMSEV 110
                  FH+PRS+E++L T+PV   DVVHLR++TEY W++DFS+YT IVY++SE+
Sbjct: 72  GGAAGAQFHIPRSIEVELLTSPVLERDVVHLRYFTEYQWLLDFSVYTGIVYVVSEL 127



 Score = 60.9 bits (141), Expect = 3e-09
 Identities = 24/38 (63%), Positives = 32/38 (84%)

Query: 120 VLNFNFALPFILVLLWVRPITRHYLTARVFSGMEKPFV 157
           +LN +F LPFILV+LW+RPI+R YLT RVF GM++P +
Sbjct: 275 LLNLSFVLPFILVILWIRPISRDYLTVRVFQGMQQPLL 312


>BT022879-1|AAY55295.1|  542|Drosophila melanogaster IP12872p
           protein.
          Length = 542

 Score = 29.1 bits (62), Expect = 9.8
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)

Query: 41  PKERSKGKKGGKYESNGKPETFHVPRSLEIQ--LETAP 76
           PK+R K KKGG  E +GK +       +E +  ++T+P
Sbjct: 473 PKKRKKNKKGGDPEESGKADAGPADAQMEAEEAVKTSP 510


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.327    0.138    0.429 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,387,180
Number of Sequences: 52641
Number of extensions: 515398
Number of successful extensions: 1315
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1303
Number of HSP's gapped (non-prelim): 11
length of query: 356
length of database: 24,830,863
effective HSP length: 86
effective length of query: 270
effective length of database: 20,303,737
effective search space: 5482008990
effective search space used: 5482008990
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 62 (29.1 bits)