GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002380-TA|BGIBMGA002380-PA|undefined
         (356 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    26   0.57 
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   5.3  

>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 25.8 bits (54), Expect = 0.57
 Identities = 11/29 (37%), Positives = 17/29 (58%)

Query: 50  GGKYESNGKPETFHVPRSLEIQLETAPVT 78
           G K +  G P TF   ++L I+L+  P+T
Sbjct: 506 GPKEDERGLPFTFREQKNLMIELDKFPIT 534


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 22.6 bits (46), Expect = 5.3
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 104 VYIMSEVLRRKQNKVFVLNFNFALPFI 130
           VY+   VLR  QN VF+   N  + ++
Sbjct: 799 VYLDGNVLRELQNHVFIGRKNMRVLYV 825


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.327    0.138    0.429 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,523
Number of Sequences: 429
Number of extensions: 3116
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 2
length of query: 356
length of database: 140,377
effective HSP length: 58
effective length of query: 298
effective length of database: 115,495
effective search space: 34417510
effective search space used: 34417510
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 44 (21.8 bits)