GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002379-TA|BGIBMGA002379-PA|IPR008603|Dynactin p62
         (430 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    27   0.74 
X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein...    24   9.2  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 27.5 bits (58), Expect = 0.74
 Identities = 9/23 (39%), Positives = 14/23 (60%)

Query: 9    KKNRCSSCFDCPSCYHTLSTRAS 31
            K +R   C DCP+CY+ +   A+
Sbjct: 1023 KYDRHQGCLDCPACYNLVQDAAN 1045


>X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein
           Agm1 protein.
          Length = 498

 Score = 23.8 bits (49), Expect = 9.2
 Identities = 8/22 (36%), Positives = 17/22 (77%)

Query: 399 SYRNTVPPAANAPNQRNHILYT 420
           S+++T+ PAA   N ++++LY+
Sbjct: 403 SWKDTIDPAACNSNPKDYLLYS 424


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.315    0.131    0.388 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 383,398
Number of Sequences: 2123
Number of extensions: 13696
Number of successful extensions: 21
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 19
Number of HSP's gapped (non-prelim): 2
length of query: 430
length of database: 516,269
effective HSP length: 66
effective length of query: 364
effective length of database: 376,151
effective search space: 136918964
effective search space used: 136918964
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 49 (23.8 bits)