Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002377-TA|BGIBMGA002377-PA|IPR007087|Zinc finger,
C2H2-type, IPR011011|Zinc finger, FYVE/PHD-type, IPR012934|Zinc
finger, AD-type
(387 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 57 5e-09
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 50 6e-07
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 45 2e-05
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 44 3e-05
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 42 1e-04
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 42 1e-04
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 41 3e-04
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 39 0.001
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 36 0.007
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 33 0.068
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 33 0.068
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 33 0.068
SPAC23H3.08c |bub3||mitotic spindle checkpoint protein Bub3|Schi... 27 3.4
SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p... 27 5.9
SPAC1B9.02c |sck1||serine/threonine protein kinase Sck1|Schizosa... 26 7.8
SPAP8A3.09c |paa1||protein phosphatase regulatory subunit Paa1|S... 26 7.8
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 56.8 bits (131), Expect = 5e-09
Identities = 31/105 (29%), Positives = 54/105 (51%), Gaps = 12/105 (11%)
Query: 276 NQKLPSSENQSKGQGAW-C--GACGKRLSSRGALRRHAHVHTVERPHACSVCGRTFAQRS 332
N ++++SK QG + C C KR + L+ H + HT RP CS+C ++FA++
Sbjct: 554 NSSSSKAKSESKSQGNYVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQH 613
Query: 333 VLQRHKLVHLGLSRHMLTHSGRVYECGGCGRQFNDKSSLLRHLKT 377
+RH+ +H G+ + + C C ++F +L RH K+
Sbjct: 614 DKRRHEQLHTGI---------KAFACVTCNQRFARMDALNRHYKS 649
Score = 39.1 bits (87), Expect = 0.001
Identities = 17/51 (33%), Positives = 24/51 (47%)
Query: 293 CGACGKRLSSRGALRRHAHVHTVERPHACSVCGRTFAQRSVLQRHKLVHLG 343
C C K + + RRH +HT + AC C + FA+ L RH +G
Sbjct: 602 CSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALNRHYKSEVG 652
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 50.0 bits (114), Expect = 6e-07
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 273 QPLNQKLPSSENQSKGQGAWCGACGKRLSSRGALRRHAH-VHTVERPHACSVCGRTFAQR 331
QP N+K S G+ C C K+ LRRH +HT E+P C +CG+ F++R
Sbjct: 406 QPSNRKT-SVPRSPGGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRR 463
Query: 332 SVLQRHKLVHLGLS 345
L++H+ +H+ S
Sbjct: 464 DNLRQHERLHVNAS 477
Score = 28.3 bits (60), Expect = 1.9
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Query: 296 CGKRLSSRGALRRHAHVHTVERPH-AC 321
CGKR S R LR+H +H P AC
Sbjct: 456 CGKRFSRRDNLRQHERLHVNASPRLAC 482
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 45.2 bits (102), Expect = 2e-05
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 10/79 (12%)
Query: 296 CGKRLSSRGALRRHAHVHTVERPHACSVCGRTFAQRSVLQRHKLVHLGLSRHMLTHSGRV 355
C KR++ + + H H +RP+ C +C F + L+RH +H +GR
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIH---------ENGRP 500
Query: 356 YECGGCGRQFNDKSSLLRH 374
Y C C ++FN +L RH
Sbjct: 501 YVC-ECLKRFNRLDALNRH 518
Score = 32.3 bits (70), Expect = 0.12
Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Query: 293 CGACGKRLSSRGALRRHAHVHTVERPHACSVCGRTFAQRSVLQRHK 338
C C L+RH +H RP+ C C + F + L RHK
Sbjct: 475 CDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CLKRFNRLDALNRHK 519
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 44.4 bits (100), Expect = 3e-05
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 9/83 (10%)
Query: 296 CGKRLSSRGALRRHAHVHTVERPHACSV--CGRTFAQRSVLQRHKLVHLGLSRHMLTHSG 353
CGK+ S L +H H+ ERP C C + F ++S L+ HK H + + H
Sbjct: 30 CGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNV-KPFSCH-- 86
Query: 354 RVYECGGCGRQFNDKSSLLRHLK 376
Y+ GC QF + L RH++
Sbjct: 87 --YD--GCDAQFYTQQHLERHIE 105
Score = 41.1 bits (92), Expect = 3e-04
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 16/91 (17%)
Query: 293 CGACGKRLSSRGALRRHAHVH--TVE--RPHACSV--CGRTFAQRSVLQRH-KLVHLGLS 345
C CG++ + LR H +H T+E + + C + C ++F + S L++H ++H G
Sbjct: 206 CSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEG-- 263
Query: 346 RHMLTHSGRVYECGGCGRQFNDKSSLLRHLK 376
+ C CG +F K L RHL+
Sbjct: 264 -------NMAFHCDSCGTKFGYKHMLQRHLE 287
Score = 35.5 bits (78), Expect = 0.013
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 8/67 (11%)
Query: 311 HVHTVERPHACSVCGRTFAQRSVLQRHKLVHLGLSRHMLTHSGRVYEC--GGCGRQFNDK 368
H+ P +CS+CGR F + L+ H ++H + Y C GC + F
Sbjct: 197 HIREAHVP-SCSICGRQFKTAAHLRHHVVLH-----QTTLEERKTYHCPMEGCKKSFTRS 250
Query: 369 SSLLRHL 375
S+L +H+
Sbjct: 251 SALKKHI 257
Score = 30.3 bits (65), Expect = 0.48
Identities = 22/89 (24%), Positives = 36/89 (40%), Gaps = 10/89 (11%)
Query: 296 CGKRLSSRGALRRHAHVHTVERPHACS--VCGRTFAQRSVLQRH-KLVHLGLSRHMLTHS 352
C + ++ L RH VH +P+AC+ C F++ L+ H H L + T+
Sbjct: 90 CDAQFYTQQHLERHIEVHRKPKPYACTWEGCDECFSKHQQLRSHISACHTHLLPYPCTYQ 149
Query: 353 GRVYECGGCGRQFNDKSSLLRHLKTASHR 381
C +F K L H+ A +
Sbjct: 150 -------DCELRFATKQKLQNHVNRAHEK 171
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 42.3 bits (95), Expect = 1e-04
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 8/90 (8%)
Query: 256 NEENTNVITSTDTANVSQPLNQKLPSSENQSKGQGAWCGACGKRLSSRGALRRHAHVHTV 315
N + +TS S +K P++ Q Q C C + + L+RH HT
Sbjct: 36 NANTPSSVTSNSKPVASSTAAKKDPNAPPQKVKQYV-CETCTRAFARLEHLKRHIRSHTN 94
Query: 316 ERPHACSV-------CGRTFAQRSVLQRHK 338
E+P CS CGR F++R +L RH+
Sbjct: 95 EKPFTCSEIDGLPTGCGRQFSRRDLLLRHQ 124
Score = 37.9 bits (84), Expect = 0.002
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Query: 317 RPHACSVCGRTFAQRSVLQRHKLVHLGLSRHMLTHSGRVYECGGCGRQFNDKSSLLRHLK 376
+ + C C R FA+ L+RH H + + GCGRQF+ + LLRH +
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPT--GCGRQFSRRDLLLRHQQ 125
Query: 377 TASHRDQP 384
QP
Sbjct: 126 KIHRNPQP 133
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 42.3 bits (95), Expect = 1e-04
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 293 CGACGKRLSSRGALRRHAHVHTVERPHACSV--CGRTFAQRSVLQRHKLVH 341
C C + S +L+ H + HT ERP C CG+ F RS ++RH+ +H
Sbjct: 470 CTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 30.3 bits (65), Expect = 0.48
Identities = 26/124 (20%), Positives = 50/124 (40%), Gaps = 11/124 (8%)
Query: 255 LNEENTNVITSTDTANVSQPLNQKLPSSENQSKGQGAWCGACGKRLSSRGALRRHAHVHT 314
++ E + V T + + P+ Q+ S+ + + +SR + H +
Sbjct: 400 MSAELSVVATLASNSAQAHPMGQQSDSNYSDHHNNDKRAHVSRRHSTSRKIAQSHTGSSS 459
Query: 315 VERP----HACSVCGRTFAQRSVLQRHKLVHLGLSRHMLTHSGRVYECGGCGRQFNDKSS 370
+ C+ C + F++ S L+ H H G V + GCG+ FN +S+
Sbjct: 460 TSSAANVRYRCTECLQGFSRPSSLKIHTYSHTG-------ERPFVCDYAGCGKAFNVRSN 512
Query: 371 LLRH 374
+ RH
Sbjct: 513 MRRH 516
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 40.7 bits (91), Expect = 3e-04
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 296 CGKRLSSRGALRRHAHVHTVERPHACSVCGRTFAQRSVLQRH-KLVHL 342
C K + + LRRH H + +CS C R FA+ VL RH + +HL
Sbjct: 33 CPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQQMHL 80
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 38.7 bits (86), Expect = 0.001
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 281 SSENQSKGQGAWCGACGKRLSSRGALRRHAHVHTVERPHACSV--CGRTFAQRSVLQRHK 338
S++N + C C K RH HT E+PH C+ C + F++ L RH
Sbjct: 16 STKNPDAPRPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHA 75
Query: 339 LVH 341
+H
Sbjct: 76 RIH 78
Score = 33.1 bits (72), Expect = 0.068
Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 7/60 (11%)
Query: 317 RPHACSVCGRTFAQRSVLQRHKLVHLGLSRHMLTHSGRVYECGGCGRQFNDKSSLLRHLK 376
RP+ C +C + F + RH H G H+ T GC ++F+ L RH +
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFP-------GCAKRFSRSDELTRHAR 76
Score = 26.2 bits (55), Expect = 7.8
Identities = 10/19 (52%), Positives = 11/19 (57%)
Query: 296 CGKRLSSRGALRRHAHVHT 314
C KR S L RHA +HT
Sbjct: 61 CAKRFSRSDELTRHARIHT 79
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 36.3 bits (80), Expect = 0.007
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 293 CGACGKRLSSRGALRRHAHVHTVERPHACSV--CGRTFAQRSVLQRH-KLVH 341
C G +SR AL H HT E+P CSV C R+F + L +H + VH
Sbjct: 80 CPRKGMVQTSRFALVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMRTVH 131
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 33.1 bits (72), Expect = 0.068
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Query: 293 CGACGKRLSSRGALRRHAHVHTVERPHACSV--CGRTFAQRSVLQRHKLVHL 342
C C + + RH HT E+P CS C + F +R L RH HL
Sbjct: 6 CPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTHL 57
Score = 31.1 bits (67), Expect = 0.28
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 13/64 (20%)
Query: 317 RPHACSVCGRTFAQRSVLQRHKLVHLGLSRHMLTHSG-RVYECG--GCGRQFNDKSSLLR 373
+ + C C R F + Q H++ RH+ +H+G + +EC C ++F + L+R
Sbjct: 2 KSYECPFCKRVFHR----QEHQV------RHIRSHTGEKPFECSYPSCKKRFTRRDELIR 51
Query: 374 HLKT 377
H++T
Sbjct: 52 HVRT 55
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 33.1 bits (72), Expect = 0.068
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 296 CGKRLSSRGALRRHAHVHTVERPHACSVCGRTFAQRSVLQRH 337
C K + + RRH HT + C C +F + VL RH
Sbjct: 24 CTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRH 65
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 33.1 bits (72), Expect = 0.068
Identities = 14/45 (31%), Positives = 20/45 (44%)
Query: 293 CGACGKRLSSRGALRRHAHVHTVERPHACSVCGRTFAQRSVLQRH 337
C C KR + L RH H+ P C C ++ +L+RH
Sbjct: 33 CDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRH 77
Score = 26.6 bits (56), Expect = 5.9
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 344 LSRHMLTHSGRVYECGGCGRQFNDKSSLLRHLKTASHRDQP 384
L+ L S RV+ C C ++F +L RH K + +P
Sbjct: 19 LTEPSLIDSKRVFPCDQCAKRFTRHENLTRH-KACHSKAEP 58
>SPAC23H3.08c |bub3||mitotic spindle checkpoint protein
Bub3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 320
Score = 27.5 bits (58), Expect = 3.4
Identities = 13/58 (22%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Query: 53 VGLELTHENCLPNVICTGCFEELNRCYTFRKKCEVSYQKLKSHLQAVKEKECLNQTMQ 110
+G ++ + N++ GC E N Y R ++ +Q+ S + + C NQ +
Sbjct: 135 IGKKIFASSSRDNILVLGCSERENLVYDIR-NLKLPFQRRPSSFKYMTRSVCCNQNFE 191
>SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2280
Score = 26.6 bits (56), Expect = 5.9
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 255 LNEENTNVITSTDTANVSQPLNQKLPSSENQSKGQGAWC 293
L +EN N++T+ + + L K+ + S+G G C
Sbjct: 1707 LQKENPNILTTEEVVTETGELRHKITTIIGSSEGLGVEC 1745
>SPAC1B9.02c |sck1||serine/threonine protein kinase
Sck1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 696
Score = 26.2 bits (55), Expect = 7.8
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 256 NEENTNVITSTDTANVSQPLNQKL 279
N +N N++++ D AN S PL+ +
Sbjct: 601 NVKNINIVSNVDPANASTPLSNTI 624
>SPAP8A3.09c |paa1||protein phosphatase regulatory subunit
Paa1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 590
Score = 26.2 bits (55), Expect = 7.8
Identities = 13/46 (28%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 179 VLQEARNTEITPDISSF--LSTLLVQVGVLSQQDDMYVFMDSSINN 222
++ E ++ EIT +++ LST+ + +G +D++ F+D SI++
Sbjct: 16 LIDELKHDEITYRLNALERLSTIALALGPERTRDELIPFLDESIDD 61
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.319 0.132 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,565,314
Number of Sequences: 5004
Number of extensions: 59107
Number of successful extensions: 205
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 163
Number of HSP's gapped (non-prelim): 35
length of query: 387
length of database: 2,362,478
effective HSP length: 74
effective length of query: 313
effective length of database: 1,992,182
effective search space: 623552966
effective search space used: 623552966
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 55 (26.2 bits)
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