GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002377-TA|BGIBMGA002377-PA|IPR007087|Zinc finger,
C2H2-type, IPR011011|Zinc finger, FYVE/PHD-type, IPR012934|Zinc
finger, AD-type
         (387 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    55   3e-09
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    36   0.001
CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein...    32   0.031
EF519384-1|ABP68493.1|  506|Anopheles gambiae LRIM1 protein.           25   3.5  
EF519370-1|ABP68479.1|  452|Anopheles gambiae LRIM1 protein.           24   8.2  
AJ973470-1|CAJ01517.1|  117|Anopheles gambiae hypothetical prote...    24   8.2  
AJ697733-1|CAG26926.1|  117|Anopheles gambiae putative chemosens...    24   8.2  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 55.2 bits (127), Expect = 3e-09
 Identities = 31/100 (31%), Positives = 40/100 (40%), Gaps = 9/100 (9%)

Query: 285 QSKGQGAWCGACGKRLSSRGALRRHAHVHTVERPHACSVCGRTFAQRSVLQRHKLVHLGL 344
           QS G    C  C    +    L RH   H+ +RPH C VC R F   + LQ H   H G 
Sbjct: 121 QSTGSTYMCNYCNYTSNKLFLLSRHLKTHSEDRPHKCVVCERGFKTLASLQNHVNTHTGT 180

Query: 345 SRHMLTHSGRVYECGGCGRQFNDKSSLLRHLKTASHRDQP 384
             H   H      C  C   F     L+RH++     ++P
Sbjct: 181 KPHRCKH------CDNC---FTTSGELIRHIRYRHTHERP 211



 Score = 52.8 bits (121), Expect = 2e-08
 Identities = 25/83 (30%), Positives = 39/83 (46%)

Query: 293 CGACGKRLSSRGALRRHAHVHTVERPHACSVCGRTFAQRSVLQRHKLVHLGLSRHMLTHS 352
           C  C     S   L  H  +HT ++P+ C  C +TF Q+ +L+RH   +        T  
Sbjct: 357 CEYCPYASISMRHLESHLLLHTDQKPYKCDQCAQTFRQKQLLKRHMNYYHNPDYVAPTPK 416

Query: 353 GRVYECGGCGRQFNDKSSLLRHL 375
            + + C  C R F  K +L+RH+
Sbjct: 417 AKTHICPTCKRPFRHKGNLIRHM 439



 Score = 49.2 bits (112), Expect = 2e-07
 Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 7/92 (7%)

Query: 293 CGACGKRLSSRGALRRHAHVHTVERPHACSVCGRTFAQRSVLQRHKLVHLGLSRHMLTHS 352
           C  C      +  L RH  +HT E+P++C VC   F Q + L+ HK++H          +
Sbjct: 242 CPHCTYASPDKFKLTRHMRIHTGEKPYSCDVCFARFTQSNSLKAHKMIH-------QVGN 294

Query: 353 GRVYECGGCGRQFNDKSSLLRHLKTASHRDQP 384
             V++C  C      K+ L  H++     D+P
Sbjct: 295 KPVFQCKLCPTTCGRKTDLRIHVQNLHTADKP 326



 Score = 47.6 bits (108), Expect = 6e-07
 Identities = 33/102 (32%), Positives = 43/102 (42%), Gaps = 20/102 (19%)

Query: 293 CGACGKRLSSRGALRRHAHV-HTVERPHACSVCGRTFAQRSVLQRHKLVHLG-------- 343
           C  C    ++ G L RH    HT ERPH C+ C     + S L+RH   H G        
Sbjct: 185 CKHCDNCFTTSGELIRHIRYRHTHERPHKCTECDYASVELSKLKRHIRTHTGEKPFQCPH 244

Query: 344 ----------LSRHMLTHSG-RVYECGGCGRQFNDKSSLLRH 374
                     L+RHM  H+G + Y C  C  +F   +SL  H
Sbjct: 245 CTYASPDKFKLTRHMRIHTGEKPYSCDVCFARFTQSNSLKAH 286



 Score = 42.7 bits (96), Expect = 2e-05
 Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 11/96 (11%)

Query: 293 CGACGKRLSSRGALRRHAHVHTVERPHACSVCGRTFAQRSVLQRHKLVHLGLSRHMLTHS 352
           C  C      R + + HA  H  E+ + C  C       S+  RH      L  H+L H+
Sbjct: 329 CKRCDSTFPDRYSYKMHAKTHEGEKCYRCEYC----PYASISMRH------LESHLLLHT 378

Query: 353 G-RVYECGGCGRQFNDKSSLLRHLKTASHRDQPAAT 387
             + Y+C  C + F  K  L RH+    + D  A T
Sbjct: 379 DQKPYKCDQCAQTFRQKQLLKRHMNYYHNPDYVAPT 414



 Score = 27.1 bits (57), Expect = 0.88
 Identities = 15/58 (25%), Positives = 23/58 (39%), Gaps = 9/58 (15%)

Query: 293 CGACGKRLSSRGALRRHA-HVHTVE--------RPHACSVCGRTFAQRSVLQRHKLVH 341
           C  C +    +  L+RH  + H  +        + H C  C R F  +  L RH  +H
Sbjct: 385 CDQCAQTFRQKQLLKRHMNYYHNPDYVAPTPKAKTHICPTCKRPFRHKGNLIRHMAMH 442


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 36.3 bits (80), Expect = 0.001
 Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 5/60 (8%)

Query: 293 CGACGKRLSSRGALRRHAHVHTVERPHACSVCGRTFAQRSVLQRH-KLVHLGLSRHMLTH 351
           C +C K +S+R     HA++H  +  H C VCG+ F +R  ++ H K+ H  L      H
Sbjct: 901 CVSCHKTVSNRW---HHANIHRPQS-HECPVCGQKFTRRDNMKAHCKVKHPELRDRFYNH 956



 Score = 25.4 bits (53), Expect = 2.7
 Identities = 9/30 (30%), Positives = 16/30 (53%)

Query: 347 HMLTHSGRVYECGGCGRQFNDKSSLLRHLK 376
           H   H  + +EC  CG++F  + ++  H K
Sbjct: 914 HANIHRPQSHECPVCGQKFTRRDNMKAHCK 943


>CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein
           protein.
          Length = 415

 Score = 31.9 bits (69), Expect = 0.031
 Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 5/77 (6%)

Query: 270 NVSQPLNQKLPSSENQSKGQGAWCGACGKRLSSRGALRRHAH-VHTVERPH---ACSVCG 325
           N SQP      +    S+GQ   C  C     ++   ++H + VH +   +    C++C 
Sbjct: 328 NQSQPARTGGSAVTITSEGQRFQCNLCDMSYRTKLQYQKHEYEVHRISNENFGIKCTICH 387

Query: 326 RTFAQRSVLQRH-KLVH 341
           + F+QR   Q H + +H
Sbjct: 388 KLFSQRQDYQLHMRAIH 404


>EF519384-1|ABP68493.1|  506|Anopheles gambiae LRIM1 protein.
          Length = 506

 Score = 25.0 bits (52), Expect = 3.5
 Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%)

Query: 169 DGKR-FGETDDVLQEARNTEITPDISSFLSTLLVQVGVLSQQDDMYVFMDSSINN 222
           +G+R   E D  LQ+A      P  +   S L +   ++ + ++MYV   S+ NN
Sbjct: 400 NGRRAHAELDGTLQQAVGQIELPHATEEQSPLQLLRAIVKRYEEMYVEQQSAQNN 454


>EF519370-1|ABP68479.1|  452|Anopheles gambiae LRIM1 protein.
          Length = 452

 Score = 23.8 bits (49), Expect = 8.2
 Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)

Query: 169 DGKR-FGETDDVLQEARNTEITPDISSFLSTLLVQVGVLSQQDDMYVFMDSSINN 222
           +G+R   E D  LQ+A      P  +   S L     ++ + ++MYV   S+ NN
Sbjct: 385 NGRRAHAELDGTLQQAVGQIELPHATEEQSPLQPLRAIVKRYEEMYVEQQSAQNN 439


>AJ973470-1|CAJ01517.1|  117|Anopheles gambiae hypothetical protein
           protein.
          Length = 117

 Score = 23.8 bits (49), Expect = 8.2
 Identities = 11/35 (31%), Positives = 19/35 (54%)

Query: 78  CYTFRKKCEVSYQKLKSHLQAVKEKECLNQTMQQA 112
           C   +  C+   ++LK+ L  V ++ C N + QQA
Sbjct: 55  CVLEKSPCDQLGRQLKAALPEVIQRNCRNCSPQQA 89


>AJ697733-1|CAG26926.1|  117|Anopheles gambiae putative chemosensory
           protein CSP4 protein.
          Length = 117

 Score = 23.8 bits (49), Expect = 8.2
 Identities = 11/35 (31%), Positives = 19/35 (54%)

Query: 78  CYTFRKKCEVSYQKLKSHLQAVKEKECLNQTMQQA 112
           C   +  C+   ++LK+ L  V ++ C N + QQA
Sbjct: 55  CVLEKSPCDQLGRQLKAALPEVIQRNCRNCSPQQA 89


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.132    0.392 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 357,991
Number of Sequences: 2123
Number of extensions: 13890
Number of successful extensions: 37
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 17
Number of HSP's gapped (non-prelim): 15
length of query: 387
length of database: 516,269
effective HSP length: 65
effective length of query: 322
effective length of database: 378,274
effective search space: 121804228
effective search space used: 121804228
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 49 (23.8 bits)