GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002376-TA|BGIBMGA002376-PA|IPR001753|Enoyl-CoA
hydratase/isomerase
         (348 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    27   0.15 
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    23   2.5  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    23   3.3  

>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 27.5 bits (58), Expect = 0.15
 Identities = 13/42 (30%), Positives = 23/42 (54%)

Query: 307 IDKDNKPQWNPKSLAEADDEYVESYFKRLPEDKELKFFDSKL 348
           + K+NK  W PK+  + DD+ + S      +D+E K  D+ +
Sbjct: 142 LKKENKMTWEPKNKTDDDDDALVSDSDDREKDEEDKRDDTDM 183


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 11/32 (34%), Positives = 19/32 (59%)

Query: 219 SNIKHINYCFAASTVEEIIERLEKVQNEWSVK 250
           +N K I    +A  V+++++  EKV N W +K
Sbjct: 240 TNEKEIFERLSALPVDKLLQISEKVANIWGLK 271


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 11/31 (35%), Positives = 15/31 (48%)

Query: 15  NAGIVTLNRPKALNSLNTSMVSKLLPQLQEW 45
           NAG   LN   A + L  S++S  L    +W
Sbjct: 106 NAGNAILNGIVASSKLRASLISSCLSFFSQW 136


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.137    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,929
Number of Sequences: 317
Number of extensions: 3174
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 3
length of query: 348
length of database: 114,650
effective HSP length: 57
effective length of query: 291
effective length of database: 96,581
effective search space: 28105071
effective search space used: 28105071
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 44 (21.8 bits)