GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002376-TA|BGIBMGA002376-PA|IPR001753|Enoyl-CoA
hydratase/isomerase
         (348 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.              24   1.7  
AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein pro...    23   3.0  
AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    23   3.0  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    22   6.9  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   6.9  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    22   6.9  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   9.1  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    22   9.1  

>U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.
          Length = 182

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 11/41 (26%), Positives = 20/41 (48%)

Query: 171 VKAGIATHFVPSKRLYELEMLLSRCANDIEVNSLLNKFHEP 211
           +K G+  H +P++   +L     R +  I +     KFH+P
Sbjct: 11  IKVGLQAHVIPAELTAKLLGNCVRVSPVITIEPRRRKFHKP 51


>AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein
           protein.
          Length = 105

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 11/36 (30%), Positives = 18/36 (50%)

Query: 118 RYRVATEKTLIAMPETKIGLFPDVGGSFFLPRLQVN 153
           +  V  E+TL ++P+ K      + G+ F    QVN
Sbjct: 62  KMNVPFEETLPSLPDRKFQTVTSIEGNTFKTETQVN 97


>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 11/36 (30%), Positives = 18/36 (50%)

Query: 118 RYRVATEKTLIAMPETKIGLFPDVGGSFFLPRLQVN 153
           +  V  E+TL ++P+ K      + G+ F    QVN
Sbjct: 64  KMNVPFEETLPSLPDRKFQTVTSIEGNTFKTETQVN 99


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 309 KDNKPQWNPKSLAEADDEYVESYFKRLPE 337
           +D+K QW+P       + YV S    LP+
Sbjct: 78  QDHKFQWDPAEYGGVTELYVPSEHIWLPD 106


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 8/23 (34%), Positives = 13/23 (56%)

Query: 317 PKSLAEADDEYVESYFKRLPEDK 339
           PK++    D Y+ S+F+ L   K
Sbjct: 535 PKTVRTPTDSYIRSFFELLQNPK 557


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 297 DFPEGVRALLIDKDNKPQWNPKSLAEADDEYVES 330
           D PEGV  L+ID++   Q    SL E    Y +S
Sbjct: 307 DDPEGVSCLVIDRETFNQL-ISSLDEIRTRYKDS 339


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 14/43 (32%), Positives = 17/43 (39%)

Query: 262 SLKITLRALQRGAQLDLGQCLQMEYRLACRATENHDFPEGVRA 304
           S   TLR L  GA   L   L    +L  R ++ H F     A
Sbjct: 43  SADCTLRVLDPGAITGLVASLDGALKLRIRCSDVHHFESSFNA 85


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 10/50 (20%), Positives = 24/50 (48%)

Query: 191 LLSRCANDIEVNSLLNKFHEPSEDFSLASNIKHINYCFAASTVEEIIERL 240
           LL  C++++ +  +  K+   ++    A+N  +    +  + + E IE L
Sbjct: 410 LLKACSSEVMMLRMARKYDVQTDSIIFANNQPYTKDSYTVAGMGETIEDL 459


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.137    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,972
Number of Sequences: 429
Number of extensions: 3842
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 9
length of query: 348
length of database: 140,377
effective HSP length: 58
effective length of query: 290
effective length of database: 115,495
effective search space: 33493550
effective search space used: 33493550
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 44 (21.8 bits)