GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002374-TA|BGIBMGA002374-PA|IPR002110|Ankyrin
         (314 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    24   1.7  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   5.1  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   6.7  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   8.9  

>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 11/27 (40%), Positives = 13/27 (48%)

Query: 135 CNTGSGNLHVPRAINTLCVHNIILRTL 161
           C TGS  L      N LC  N ++ TL
Sbjct: 38  CATGSNGLPAGAGSNLLCASNGLVTTL 64


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 10/38 (26%), Positives = 16/38 (42%)

Query: 160 TLENAGEQTQCSCGTACAGTRPSPDRGSTLSPRCRAGG 197
           T E+ G   +C C    +G+    +     S  C+ GG
Sbjct: 160 TCEDIGNSHRCHCSDGYSGSYCQTEINECDSAPCQNGG 197


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 8/20 (40%), Positives = 14/20 (70%)

Query: 277 NIAKLWSTLRRKLAVVNWRQ 296
           NI +L + L+R + + NWR+
Sbjct: 244 NIERLCNGLKRVVKLSNWRE 263


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 9/24 (37%), Positives = 14/24 (58%)

Query: 231 VKNKPKVSSEAGRPAVKIIMNKNN 254
           +KNK  +   + +P   I+ NKNN
Sbjct: 4   IKNKLLLLDSSTQPNYLILSNKNN 27


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.316    0.131    0.396 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,435
Number of Sequences: 317
Number of extensions: 2151
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 314
length of database: 114,650
effective HSP length: 57
effective length of query: 257
effective length of database: 96,581
effective search space: 24821317
effective search space used: 24821317
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 43 (21.4 bits)