Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002374-TA|BGIBMGA002374-PA|IPR002110|Ankyrin
(314 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1558 - 27722852-27722963,27723191-27723240,27723338-277234... 34 0.13
04_04_1623 - 34846056-34846223,34846547-34846644,34846738-348468... 34 0.13
07_03_1622 + 28193862-28195181 33 0.39
01_06_0723 + 31501900-31502808,31502846-31503295 32 0.69
03_02_0114 + 5704002-5704037,5704547-5704666,5705040-5705076,570... 31 1.6
01_01_0499 - 3675303-3675484,3676888-3676982,3677046-3677096,367... 30 2.1
11_04_0109 - 13532432-13532988,13533267-13533450 30 2.8
11_01_0528 - 4148737-4149483,4149618-4150147,4150238-4150736,415... 30 2.8
07_03_0156 - 14524757-14526403 29 4.8
05_07_0236 - 28582157-28582552,28582639-28582911,28583324-285835... 29 6.4
08_01_0330 + 2963007-2963540,2964935-2965147 28 8.5
04_04_1462 - 33769122-33769151,33769385-33769426,33769571-337701... 28 8.5
>07_03_1558 -
27722852-27722963,27723191-27723240,27723338-27723406,
27723507-27723571,27724058-27724145,27724294-27724362
Length = 150
Score = 34.3 bits (75), Expect = 0.13
Identities = 15/35 (42%), Positives = 19/35 (54%)
Query: 5 TPLHWAVQRGHGGAAAELVRCGADPTALSKFHKSP 39
TPLHWA GH L+ GA +AL+ K+P
Sbjct: 85 TPLHWACLNGHIEVIKALICAGASVSALNSHEKTP 119
>04_04_1623 -
34846056-34846223,34846547-34846644,34846738-34846829,
34847096-34847202,34847385-34847490,34848108-34848547
Length = 336
Score = 34.3 bits (75), Expect = 0.13
Identities = 15/27 (55%), Positives = 16/27 (59%)
Query: 5 TPLHWAVQRGHGGAAAELVRCGADPTA 31
TPLHWAV RGH + LV AD A
Sbjct: 254 TPLHWAVDRGHLNSVEILVNANADVNA 280
>07_03_1622 + 28193862-28195181
Length = 439
Score = 32.7 bits (71), Expect = 0.39
Identities = 18/44 (40%), Positives = 20/44 (45%)
Query: 158 LRTLENAGEQTQCSCGTACAGTRPSPDRGSTLSPRCRAGGPSYC 201
LRT E E C G AG+R DR S P C+ G YC
Sbjct: 25 LRTPEGRDEWLYCHSGVLAAGSRYFADRLSDDWPTCQILGSRYC 68
>01_06_0723 + 31501900-31502808,31502846-31503295
Length = 452
Score = 31.9 bits (69), Expect = 0.69
Identities = 14/23 (60%), Positives = 15/23 (65%)
Query: 175 ACAGTRPSPDRGSTLSPRCRAGG 197
A A RPSP RG LS RCR+ G
Sbjct: 11 AAAAARPSPYRGGWLSRRCRSSG 33
>03_02_0114 +
5704002-5704037,5704547-5704666,5705040-5705076,
5705905-5705981,5706642-5706755,5706902-5706969,
5707051-5707129,5707367-5707511,5707627-5707731,
5707917-5707994,5708192-5708247,5708533-5708651,
5708853-5709096,5709203-5709385,5709956-5710264,
5710350-5710399,5711042-5711102,5711184-5711267,
5711461-5711577,5711665-5711831,5711938-5712010,
5712497-5712581,5712693-5712886,5713073-5713228
Length = 918
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/36 (36%), Positives = 17/36 (47%)
Query: 159 RTLENAGEQTQCSCGTACAGTRPSPDRGSTLSPRCR 194
+T ENAG+ C CG T + D T P C+
Sbjct: 17 QTAENAGQYKICRCGEGDPNTSETGDSSPTSCPNCQ 52
>01_01_0499 -
3675303-3675484,3676888-3676982,3677046-3677096,
3677191-3677270,3677423-3677593,3677836-3677937,
3678092-3678244,3678392-3678523,3678702-3678788,
3678987-3679126,3679246-3679660
Length = 535
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 3 RMTPLHWAVQRGHGGAAAELVRCGADPTALSKFHKSP 39
R T LH A RGH + L+ GADP ++ +P
Sbjct: 160 RGTALHVAAARGHAAVVSVLLNHGADPNKIANIVFTP 196
>11_04_0109 - 13532432-13532988,13533267-13533450
Length = 246
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/20 (65%), Positives = 14/20 (70%)
Query: 5 TPLHWAVQRGHGGAAAELVR 24
TPLH A + GHG AA LVR
Sbjct: 154 TPLHLAARHGHGEAAEALVR 173
>11_01_0528 -
4148737-4149483,4149618-4150147,4150238-4150736,
4152041-4152043
Length = 592
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/35 (42%), Positives = 17/35 (48%)
Query: 5 TPLHWAVQRGHGGAAAELVRCGADPTALSKFHKSP 39
T LH A + GHG LV A T L+K SP
Sbjct: 91 TALHLAARHGHGATVEALVAAHAKATELNKVGVSP 125
>07_03_0156 - 14524757-14526403
Length = 548
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/26 (53%), Positives = 16/26 (61%)
Query: 3 RMTPLHWAVQRGHGGAAAELVRCGAD 28
R TPLH AV+ G AA L+ GAD
Sbjct: 70 RETPLHLAVRLGDAAAAEMLMAAGAD 95
>05_07_0236 -
28582157-28582552,28582639-28582911,28583324-28583560,
28583653-28583694,28583782-28583964,28584393-28584524,
28585605-28586057
Length = 571
Score = 28.7 bits (61), Expect = 6.4
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 110 ERAPQEQPIKIEIDNRDNVEVTGITCNTGSGNLHVP-RAINTLCVHNIILRTLENA 164
E+ PQ +P + NV VTGIT S H+ + + VH++ + + EN+
Sbjct: 262 EKMPQIKPTALRFYGSSNVTVTGITI-VNSSQCHLKFDSCQGVMVHDLTISSPENS 316
>08_01_0330 + 2963007-2963540,2964935-2965147
Length = 248
Score = 28.3 bits (60), Expect = 8.5
Identities = 16/53 (30%), Positives = 21/53 (39%)
Query: 102 RSDSGRGEERAPQEQPIKIEIDNRDNVEVTGITCNTGSGNLHVPRAINTLCVH 154
RS G EE AP + + +D RD +T S L P A + H
Sbjct: 43 RSSRGGDEEEAPTPLSLPLRLDRRDPASGEATYVSTASARLPPPSAAFEVADH 95
>04_04_1462 -
33769122-33769151,33769385-33769426,33769571-33770158,
33770398-33770508,33770585-33770625,33771238-33771382,
33771578-33771781,33772626-33772769,33772991-33773183,
33774559-33774602,33774694-33774822,33774907-33774954,
33775058-33775120,33775198-33775236,33776694-33776767,
33777460-33777518,33777709-33777768,33777920-33778044,
33778693-33778751,33779418-33779511,33779572-33779625,
33779775-33779813,33780423-33780602
Length = 854
Score = 28.3 bits (60), Expect = 8.5
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 4/36 (11%)
Query: 283 STLRRKLAVVNWRQA----PAALCGDMRLRALGEPN 314
S RRKLA +A P CGD R RA G+P+
Sbjct: 377 SRTRRKLAAGGLERAASSRPPCCCGDRRSRAAGDPH 412
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.131 0.396
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,597,872
Number of Sequences: 37544
Number of extensions: 322332
Number of successful extensions: 902
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 886
Number of HSP's gapped (non-prelim): 18
length of query: 314
length of database: 14,793,348
effective HSP length: 82
effective length of query: 232
effective length of database: 11,714,740
effective search space: 2717819680
effective search space used: 2717819680
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 60 (28.3 bits)
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