GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002374-TA|BGIBMGA002374-PA|IPR002110|Ankyrin
         (314 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    25   2.1  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    25   3.6  
EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            24   6.4  
U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase...    23   8.4  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 14/51 (27%), Positives = 19/51 (37%)

Query: 153  VHNIILRTLENAGEQTQCSCGTACAGTRPSPDRGSTLSPRCRAGGPSYCPV 203
            VH I+ + L+    + QC          PS  +     P    G PS  PV
Sbjct: 1998 VHGIMFKDLKQILRKEQCDASILLTANVPSAKKIIVHGPEDEGGIPSQFPV 2048


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 9/23 (39%), Positives = 11/23 (47%)

Query: 162 ENAGEQTQCSCGTACAGTRPSPD 184
           E    + QC CG      RP+PD
Sbjct: 558 EECSGRGQCVCGVCVCERRPNPD 580


>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 11/32 (34%), Positives = 16/32 (50%)

Query: 75  LVTEQSMSVDQDAQPQINFDPVQNIPGRSDSG 106
           L   + +  ++ A PQ N  P QN   R +SG
Sbjct: 179 LAIAKKLPKNEGAGPQQNIRPTQNETNRQNSG 210


>U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 332

 Score = 23.4 bits (48), Expect = 8.4
 Identities = 9/16 (56%), Positives = 12/16 (75%)

Query: 274 DVTNIAKLWSTLRRKL 289
           D+  I  LWSTL+R+L
Sbjct: 266 DLNPIENLWSTLKRQL 281


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.316    0.131    0.396 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 284,166
Number of Sequences: 2123
Number of extensions: 10017
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 10
Number of HSP's gapped (non-prelim): 4
length of query: 314
length of database: 516,269
effective HSP length: 64
effective length of query: 250
effective length of database: 380,397
effective search space: 95099250
effective search space used: 95099250
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 48 (23.4 bits)