GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002373-TA|BGIBMGA002373-PA|IPR002110|Ankyrin
         (124 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    21   2.6  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    20   8.0  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    20   8.0  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    20   8.0  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    20   8.0  

>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like
          protein protein.
          Length = 160

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)

Query: 54 LHLAASNNHVETCAVLLRAGVSRDSRTKVDRTP 86
          L + +S  H E C VL+R    RDS  K+ + P
Sbjct: 28 LGINSSFVHKEHCYVLVRLARFRDS-VKLSKIP 59


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 9/24 (37%), Positives = 12/24 (50%)

Query: 23  VPPRNSAARWASRLPVPLDRQRLP 46
           V PR +  +  S +P P    RLP
Sbjct: 345 VSPRVNTIKHTSCIPTPNGDSRLP 368


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 9/24 (37%), Positives = 12/24 (50%)

Query: 23  VPPRNSAARWASRLPVPLDRQRLP 46
           V PR +  +  S +P P    RLP
Sbjct: 345 VSPRVNTIKHTSCIPTPNGDSRLP 368


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 11/40 (27%), Positives = 16/40 (40%)

Query: 23  VPPRNSAARWASRLPVPLDRQRLPVQLGTSPLHLAASNNH 62
           VP   S  R+  R        +   +LG + +HL   N H
Sbjct: 276 VPSPRSQRRYTGRATCDCPNCQEAERLGPAGVHLRKKNIH 315


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 12/37 (32%), Positives = 14/37 (37%)

Query: 6   PFTTDWSRTTTLDRTHVVPPRNSAARWASRLPVPLDR 42
           PF  D  R     R H+V  +      A R P P  R
Sbjct: 246 PFECDKCRGRFRRRHHLVHHKCGGEEEAERAPAPAVR 282


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.322    0.132    0.407 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,331
Number of Sequences: 317
Number of extensions: 942
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 124
length of database: 114,650
effective HSP length: 50
effective length of query: 74
effective length of database: 98,800
effective search space:  7311200
effective search space used:  7311200
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (21.0 bits)
S2: 39 (19.8 bits)