Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002373-TA|BGIBMGA002373-PA|IPR002110|Ankyrin
(124 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyce... 38 5e-04
SPCP1E11.10 |||ankyrin repeat protein, unknown biological role|S... 38 6e-04
SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual 37 8e-04
SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 36 0.002
SPBP16F5.05c |||ribosome biogenesis protein Nop8|Schizosaccharom... 36 0.002
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 29 0.16
SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex s... 29 0.21
SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase G... 28 0.37
SPAC13D6.04c |btb3||BTB/POZ domain protein Btb3|Schizosaccharomy... 26 1.5
SPCC1827.04 |||ankyrin repeat protein, unknown biological role|S... 25 2.6
SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex ... 25 2.6
SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyce... 24 6.1
SPBC6B1.04 |mde4||monopolin-like complex subunit Mde4|Schizosacc... 24 8.1
SPBP19A11.03c |mts4|rpn1|19S proteasome regulatory subunit Mts4|... 24 8.1
>SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1151
Score = 37.9 bits (84), Expect = 5e-04
Identities = 22/61 (36%), Positives = 28/61 (45%)
Query: 50 GTSPLHLAASNNHVETCAVLLRAGVSRDSRTKVDRTPLHLAAYAGHADVIALLLRYGAQV 109
G S LHL A+ L AG + R + TPLH A+ H D+ LL GA+
Sbjct: 862 GRSLLHLTAACGLSNASTFLCNAGCDVNKRDALGYTPLHYASLYDHKDICVNLLSNGAKP 921
Query: 110 D 110
D
Sbjct: 922 D 922
Score = 28.7 bits (61), Expect = 0.28
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 49 LGTSPLHLAASNNHVETCAVLLRAGVSRDSRTKVDRTPLHLAA 91
LG +PLH A+ +H + C LL G D + P+ L++
Sbjct: 894 LGYTPLHYASLYDHKDICVNLLSNGAKPDVIGASGKKPIDLSS 936
>SPCP1E11.10 |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 207
Score = 37.5 bits (83), Expect = 6e-04
Identities = 17/62 (27%), Positives = 34/62 (54%)
Query: 51 TSPLHLAASNNHVETCAVLLRAGVSRDSRTKVDRTPLHLAAYAGHADVIALLLRYGAQVD 110
T + +AAS+ + L +G+S ++ + TP+H A GH+D++ +L+ G ++
Sbjct: 5 TPNIWIAASDGKTDVVLKHLDSGISPNAADENGYTPIHAAVSYGHSDLLKILVERGGDIN 64
Query: 111 CR 112
R
Sbjct: 65 IR 66
Score = 26.2 bits (55), Expect = 1.5
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 50 GTSPLHLAASNNHVETCAVLLRAGVSRDSRTKVDRTPL 87
G +P+H A S H + +L+ G + R + TPL
Sbjct: 37 GYTPIHAAVSYGHSDLLKILVERGGDINIRDQDGETPL 74
>SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 234
Score = 37.1 bits (82), Expect = 8e-04
Identities = 20/58 (34%), Positives = 28/58 (48%)
Query: 50 GTSPLHLAASNNHVETCAVLLRAGVSRDSRTKVDRTPLHLAAYAGHADVIALLLRYGA 107
G +PLH AA+ ++ L+ ++ TPLH A GH DV L+R GA
Sbjct: 141 GQTPLHRAAAVGKIQVVKYLISQRAPLNTSDSYGFTPLHFALAEGHPDVGVELVRAGA 198
Score = 25.8 bits (54), Expect = 2.0
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 50 GTSPLHLAASNNHVETCAVLLRAGVSRDSRTKVDRTPLHL 89
G +PLH A + H + L+RAG + + T L +
Sbjct: 174 GFTPLHFALAEGHPDVGVELVRAGADTLRKDSENHTALEV 213
>SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 642
Score = 35.5 bits (78), Expect = 0.002
Identities = 22/60 (36%), Positives = 28/60 (46%)
Query: 50 GTSPLHLAASNNHVETCAVLLRAGVSRDSRTKVDRTPLHLAAYAGHADVIALLLRYGAQV 109
G + LHLA LL +S D R TPL A+Y G+ + LLR+GA V
Sbjct: 101 GFNCLHLAVHAASPLLVVYLLHLDISVDLRDDQQHTPLMWASYHGNEPITNCLLRWGADV 160
Score = 33.9 bits (74), Expect = 0.008
Identities = 21/70 (30%), Positives = 31/70 (44%)
Query: 49 LGTSPLHLAASNNHVETCAVLLRAGVSRDSRTKVDRTPLHLAAYAGHADVIALLLRYGAQ 108
L +P+H AA V+T L++ G + K LHLA +A ++ LL
Sbjct: 67 LQAAPIHWAAKRGSVKTVHYLVQHGADPLLKDKQGFNCLHLAVHAASPLLVVYLLHLDIS 126
Query: 109 VDCRSVLLHS 118
VD R H+
Sbjct: 127 VDLRDDQQHT 136
Score = 25.8 bits (54), Expect = 2.0
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 52 SPLHLAASNNHVETCAVLLRAGVSRDSRTKVDRTPLHLAAYAGHADVIALLLRYGAQVDC 111
+PL A+ + + LLR G + + TPLH + G+ + L+L+ G + C
Sbjct: 136 TPLMWASYHGNEPITNCLLRWGADVLATDEDKMTPLHWSIVGGNLKCMKLILKEGG-IPC 194
Query: 112 RSV 114
+V
Sbjct: 195 TAV 197
Score = 25.0 bits (52), Expect = 3.5
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 54 LHLAASNNHVETCAVLLRAG-VSRDSRTKVDRTPLHLAAYAGHADVIALLLRYGAQVD 110
L LAAS ++T L+ + + ++ + T LH AA + LL +GA V+
Sbjct: 4 LFLAASQGELDTVKNLISSEKIDVNATDEGGATALHWAALNQQIPICKFLLEHGADVN 61
>SPBP16F5.05c |||ribosome biogenesis protein
Nop8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 146
Score = 35.5 bits (78), Expect = 0.002
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 50 GTSPLHLAASNNHVETCAVLLRAGVSRDSRTKVDRTPLHLAAYAGHADVIALLLRY 105
G + +H AA N H E C +LL AG + +++P++ A V+ L L +
Sbjct: 71 GNTAMHWAALNGHAEICKLLLEAGGDPHIKNIYEKSPIYEADIRNQQKVMDLFLDF 126
Score = 35.1 bits (77), Expect = 0.003
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 50 GTSPLHLAASNNHVETCAVLLRAGVSR--DSRTKVDRTPLHLAAYAGHADVIALLLRYGA 107
G S LH+A++N H+ ++ +++ + T +H AA GHA++ LLL G
Sbjct: 36 GNSGLHMASANGHIAVVQKIIPYLNKEVINAQNESGNTAMHWAALNGHAEICKLLLEAGG 95
Query: 108 QVDCRSV 114
+++
Sbjct: 96 DPHIKNI 102
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 29.5 bits (63), Expect = 0.16
Identities = 13/23 (56%), Positives = 15/23 (65%)
Query: 81 KVDRTPLHLAAYAGHADVIALLL 103
K TPLHLAA AG D++ LL
Sbjct: 87 KNKNTPLHLAAMAGRQDIVEALL 109
>SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex
subunit Res2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 657
Score = 29.1 bits (62), Expect = 0.21
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 50 GTSPLHLAASNNHVETCAVLLRAGVSRDSRTKVDRTPL 87
G + LH A S H+E +LLRA ++ +TPL
Sbjct: 248 GHTSLHWACSMGHIEMIKLLLRANADIGVCNRLSQTPL 285
Score = 26.6 bits (56), Expect = 1.1
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 85 TPLHLAAYAGHADVIALLLRYGAQV 109
T LH A GH ++I LLLR A +
Sbjct: 250 TSLHWACSMGHIEMIKLLLRANADI 274
>SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase
Gde1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1076
Score = 28.3 bits (60), Expect = 0.37
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Query: 52 SPLHLAASNNHVETCAVLLRAGVSRDSRTKVDRT-PLHLAAYAGHADVI 99
+PL LA NHVE LL A + TK PL L G D+I
Sbjct: 301 TPLTLAIKGNHVEALHALLSAQDKETTSTKPGPVPPLVLTCCVGDYDLI 349
>SPAC13D6.04c |btb3||BTB/POZ domain protein Btb3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 523
Score = 26.2 bits (55), Expect = 1.5
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 83 DRTPLHLAAYAGHADVIALLLRYGA 107
D +PL LA+ GH V+ LL GA
Sbjct: 86 DYSPLVLASLCGHEPVVKFLLENGA 110
>SPCC1827.04 |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 600
Score = 25.4 bits (53), Expect = 2.6
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 85 TPLHLAAYAGHADVIALLLRYGA 107
TPLH A +A ++A LLR GA
Sbjct: 435 TPLHYAVTQKNAKLVAKLLRNGA 457
Score = 24.2 bits (50), Expect = 6.1
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 47 VQLGTS-PLHLAASNNHVETCAVLLRAGVSRDSRTKVDRTPLHLA 90
V L TS PLH A + + + A LLR G +TP ++
Sbjct: 429 VHLHTSTPLHYAVTQKNAKLVAKLLRNGADPAMLNGNGKTPFEIS 473
>SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex
subunit Apc3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 665
Score = 25.4 bits (53), Expect = 2.6
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Query: 12 SRTTTLDRTHVVPPRNSAARWASRLPVPLDRQRLPVQLGTSPLHLAASNNHVETCAVLLR 71
+R T+L ++H V PR A R +RL L R + ++P +N++ L
Sbjct: 276 NRDTSL-KSHFVEPRTQALRPGARLTYKLREARSSKRGESTPQSFREEDNNLMELLKLFG 334
Query: 72 AGV 74
GV
Sbjct: 335 KGV 337
>SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1347
Score = 24.2 bits (50), Expect = 6.1
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 50 GTSPLHLAASNNHVETCAVLLR-AGVSRDSRTKVDR-TPLHLAAYAGHADVIALLL 103
G + LH+A S N LL+ G+ + + T LH A Y G+ + +LLL
Sbjct: 52 GRTVLHIAVSENKNSFVRSLLQHKGIDVFVQDEESGYTALHRAIYVGNLEAASLLL 107
>SPBC6B1.04 |mde4||monopolin-like complex subunit
Mde4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 23.8 bits (49), Expect = 8.1
Identities = 13/67 (19%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 24 PPRNSAARWASRLPVPLDRQRLPVQLGTSPLHLAASNNHVETCAVLLRAGVSRDSRTKVD 83
PP++S + +S+ P R + P + SP + H++ + ++ + K+
Sbjct: 291 PPQSSPSAQSSQ---PFSRDKYPHSMTVSPSNARYLKKHLDDTIPSNVSDINHNDHLKIP 347
Query: 84 RTPLHLA 90
++P L+
Sbjct: 348 QSPSSLS 354
>SPBP19A11.03c |mts4|rpn1|19S proteasome regulatory subunit
Mts4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 891
Score = 23.8 bits (49), Expect = 8.1
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 40 LDRQRLPVQLGTSPLHLAASNNHV 63
L RQ++P+ +G L+ A +N H+
Sbjct: 300 LARQQIPMDMGDEELNDALNNTHL 323
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.322 0.132 0.407
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 535,535
Number of Sequences: 5004
Number of extensions: 18741
Number of successful extensions: 57
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 34
Number of HSP's gapped (non-prelim): 23
length of query: 124
length of database: 2,362,478
effective HSP length: 65
effective length of query: 59
effective length of database: 2,037,218
effective search space: 120195862
effective search space used: 120195862
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 49 (23.8 bits)
- SilkBase 1999-2023 -