GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002372-TA|BGIBMGA002372-PA|undefined
         (101 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069544-1|AAL39689.1|  328|Drosophila melanogaster LD27203p pro...    29   0.76 
AE013599-2451|AAF57876.1|  328|Drosophila melanogaster CG30101-P...    29   0.76 
AE014134-1389|AAF52597.3| 2898|Drosophila melanogaster CG7466-PA...    27   3.1  
AY061564-1|AAL29112.1|  374|Drosophila melanogaster LP11612p pro...    27   4.1  
AE014296-2405|AAF49721.2|  374|Drosophila melanogaster CG4914-PA...    27   4.1  
Y07908-1|CAA69216.1|  752|Drosophila melanogaster serine/threoni...    26   9.4  
BT004489-1|AAO42653.1|  755|Drosophila melanogaster LD22131p pro...    26   9.4  
BT001263-1|AAN71019.1|  469|Drosophila melanogaster AT02760p pro...    26   9.4  
AE014296-9|AAN11417.1|  755|Drosophila melanogaster CG1210-PH, i...    26   9.4  
AE014296-8|AAF47328.1|  755|Drosophila melanogaster CG1210-PF, i...    26   9.4  
AE014296-7|AAF47327.3|  755|Drosophila melanogaster CG1210-PA, i...    26   9.4  
AE014296-6|AAF47329.2|  819|Drosophila melanogaster CG1210-PC, i...    26   9.4  
AE014296-5|AAF47330.3|  836|Drosophila melanogaster CG1210-PD, i...    26   9.4  

>AY069544-1|AAL39689.1|  328|Drosophila melanogaster LD27203p
          protein.
          Length = 328

 Score = 29.5 bits (63), Expect = 0.76
 Identities = 14/35 (40%), Positives = 19/35 (54%)

Query: 60 GDTKTQKRRLLRFGKYEALTPHVEALGRVAAQQKI 94
          GD KT ++R L  G Y    PH E +  V  ++KI
Sbjct: 29 GDGKTVEKRGLHLGDYHHYQPHHEHIKTVTIEKKI 63


>AE013599-2451|AAF57876.1|  328|Drosophila melanogaster CG30101-PA
          protein.
          Length = 328

 Score = 29.5 bits (63), Expect = 0.76
 Identities = 14/35 (40%), Positives = 19/35 (54%)

Query: 60 GDTKTQKRRLLRFGKYEALTPHVEALGRVAAQQKI 94
          GD KT ++R L  G Y    PH E +  V  ++KI
Sbjct: 29 GDGKTVEKRGLHLGDYHHYQPHHEHIKTVTIEKKI 63


>AE014134-1389|AAF52597.3| 2898|Drosophila melanogaster CG7466-PA
            protein.
          Length = 2898

 Score = 27.5 bits (58), Expect = 3.1
 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 1/72 (1%)

Query: 19   VPGQPVLNHASRLVDGCRFFTSAENEENSIPGRGARIVPPGGDTKTQKRRLLRFGKYEAL 78
            +P    LN  + L+   R+F SA   E+ +   G R  P  G T      +    ++  L
Sbjct: 1806 LPSFRELNSPASLLPRARYFHSAVTTEHYMILYGGRTQPFNG-TDVLIAYVYACNQWVRL 1864

Query: 79   TPHVEALGRVAA 90
            T  VE +GRV A
Sbjct: 1865 TEDVELIGRVPA 1876


>AY061564-1|AAL29112.1|  374|Drosophila melanogaster LP11612p
          protein.
          Length = 374

 Score = 27.1 bits (57), Expect = 4.1
 Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 1/44 (2%)

Query: 35 CRFFTSAENEENSIPGRGARIVPPGGDTKTQKRRLLRFGKYEAL 78
          C  FT+A +   + P   A   PP   T T     +  GKY+AL
Sbjct: 18 CLLFTAATSATPATPATPATSAPPATSTATSSLSSIP-GKYQAL 60


>AE014296-2405|AAF49721.2|  374|Drosophila melanogaster CG4914-PA
          protein.
          Length = 374

 Score = 27.1 bits (57), Expect = 4.1
 Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 1/44 (2%)

Query: 35 CRFFTSAENEENSIPGRGARIVPPGGDTKTQKRRLLRFGKYEAL 78
          C  FT+A +   + P   A   PP   T T     +  GKY+AL
Sbjct: 18 CLLFTAATSATPATPATPATSAPPATSTATSSLSSIP-GKYQAL 60


>Y07908-1|CAA69216.1|  752|Drosophila melanogaster
          serine/threonine protein kinase protein.
          Length = 752

 Score = 25.8 bits (54), Expect = 9.4
 Identities = 19/66 (28%), Positives = 24/66 (36%), Gaps = 2/66 (3%)

Query: 27 HASRLVDGCRFFTSAENEENSIPGRGARIVPPGGDTKTQKRRLLRFGKYEALTPHVEALG 86
          H  + V GC   +S EN  NS  G    +    G T      +       A TPH   L 
Sbjct: 36 HHQQNVCGCGAVSSTENNNNSRYGSSKYLT--NGHTSPLAAAVASNSSSVATTPHCRMLH 93

Query: 87 RVAAQQ 92
            + QQ
Sbjct: 94 NCSLQQ 99


>BT004489-1|AAO42653.1|  755|Drosophila melanogaster LD22131p
           protein.
          Length = 755

 Score = 25.8 bits (54), Expect = 9.4
 Identities = 19/66 (28%), Positives = 24/66 (36%), Gaps = 2/66 (3%)

Query: 27  HASRLVDGCRFFTSAENEENSIPGRGARIVPPGGDTKTQKRRLLRFGKYEALTPHVEALG 86
           H  + V GC   +S EN  NS  G    +    G T      +       A TPH   L 
Sbjct: 39  HHQQNVCGCGAVSSTENNNNSRYGSSKYLT--NGHTSPLAAAVASNSSSVATTPHCRMLH 96

Query: 87  RVAAQQ 92
             + QQ
Sbjct: 97  NCSLQQ 102


>BT001263-1|AAN71019.1|  469|Drosophila melanogaster AT02760p
           protein.
          Length = 469

 Score = 25.8 bits (54), Expect = 9.4
 Identities = 19/66 (28%), Positives = 24/66 (36%), Gaps = 2/66 (3%)

Query: 27  HASRLVDGCRFFTSAENEENSIPGRGARIVPPGGDTKTQKRRLLRFGKYEALTPHVEALG 86
           H  + V GC   +S EN  NS  G    +    G T      +       A TPH   L 
Sbjct: 103 HHQQNVCGCGAVSSTENNNNSRYGSSKYLT--NGHTSPLAAAVASNSSSVATTPHCRMLH 160

Query: 87  RVAAQQ 92
             + QQ
Sbjct: 161 NCSLQQ 166


>AE014296-9|AAN11417.1|  755|Drosophila melanogaster CG1210-PH,
           isoform H protein.
          Length = 755

 Score = 25.8 bits (54), Expect = 9.4
 Identities = 19/66 (28%), Positives = 24/66 (36%), Gaps = 2/66 (3%)

Query: 27  HASRLVDGCRFFTSAENEENSIPGRGARIVPPGGDTKTQKRRLLRFGKYEALTPHVEALG 86
           H  + V GC   +S EN  NS  G    +    G T      +       A TPH   L 
Sbjct: 39  HHQQNVCGCGAVSSTENNNNSRYGSSKYLT--NGHTSPLAAAVASNSSSVATTPHCRMLH 96

Query: 87  RVAAQQ 92
             + QQ
Sbjct: 97  NCSLQQ 102


>AE014296-8|AAF47328.1|  755|Drosophila melanogaster CG1210-PF,
           isoform F protein.
          Length = 755

 Score = 25.8 bits (54), Expect = 9.4
 Identities = 19/66 (28%), Positives = 24/66 (36%), Gaps = 2/66 (3%)

Query: 27  HASRLVDGCRFFTSAENEENSIPGRGARIVPPGGDTKTQKRRLLRFGKYEALTPHVEALG 86
           H  + V GC   +S EN  NS  G    +    G T      +       A TPH   L 
Sbjct: 39  HHQQNVCGCGAVSSTENNNNSRYGSSKYLT--NGHTSPLAAAVASNSSSVATTPHCRMLH 96

Query: 87  RVAAQQ 92
             + QQ
Sbjct: 97  NCSLQQ 102


>AE014296-7|AAF47327.3|  755|Drosophila melanogaster CG1210-PA,
           isoform A protein.
          Length = 755

 Score = 25.8 bits (54), Expect = 9.4
 Identities = 19/66 (28%), Positives = 24/66 (36%), Gaps = 2/66 (3%)

Query: 27  HASRLVDGCRFFTSAENEENSIPGRGARIVPPGGDTKTQKRRLLRFGKYEALTPHVEALG 86
           H  + V GC   +S EN  NS  G    +    G T      +       A TPH   L 
Sbjct: 39  HHQQNVCGCGAVSSTENNNNSRYGSSKYLT--NGHTSPLAAAVASNSSSVATTPHCRMLH 96

Query: 87  RVAAQQ 92
             + QQ
Sbjct: 97  NCSLQQ 102


>AE014296-6|AAF47329.2|  819|Drosophila melanogaster CG1210-PC,
           isoform C protein.
          Length = 819

 Score = 25.8 bits (54), Expect = 9.4
 Identities = 19/66 (28%), Positives = 24/66 (36%), Gaps = 2/66 (3%)

Query: 27  HASRLVDGCRFFTSAENEENSIPGRGARIVPPGGDTKTQKRRLLRFGKYEALTPHVEALG 86
           H  + V GC   +S EN  NS  G    +    G T      +       A TPH   L 
Sbjct: 103 HHQQNVCGCGAVSSTENNNNSRYGSSKYLT--NGHTSPLAAAVASNSSSVATTPHCRMLH 160

Query: 87  RVAAQQ 92
             + QQ
Sbjct: 161 NCSLQQ 166


>AE014296-5|AAF47330.3|  836|Drosophila melanogaster CG1210-PD,
           isoform D protein.
          Length = 836

 Score = 25.8 bits (54), Expect = 9.4
 Identities = 19/66 (28%), Positives = 24/66 (36%), Gaps = 2/66 (3%)

Query: 27  HASRLVDGCRFFTSAENEENSIPGRGARIVPPGGDTKTQKRRLLRFGKYEALTPHVEALG 86
           H  + V GC   +S EN  NS  G    +    G T      +       A TPH   L 
Sbjct: 120 HHQQNVCGCGAVSSTENNNNSRYGSSKYLT--NGHTSPLAAAVASNSSSVATTPHCRMLH 177

Query: 87  RVAAQQ 92
             + QQ
Sbjct: 178 NCSLQQ 183


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.323    0.138    0.409 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,145,955
Number of Sequences: 52641
Number of extensions: 201932
Number of successful extensions: 282
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 280
Number of HSP's gapped (non-prelim): 13
length of query: 101
length of database: 24,830,863
effective HSP length: 74
effective length of query: 27
effective length of database: 20,935,429
effective search space: 565256583
effective search space used: 565256583
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 54 (25.8 bits)