GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002371-TA|BGIBMGA002371-PA|IPR009062|Smac/Diablo
         (223 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    24   0.84 
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    24   0.84 
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    24   1.1  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   3.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   3.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   3.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   3.4  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   3.4  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 24.2 bits (50), Expect = 0.84
 Identities = 10/47 (21%), Positives = 22/47 (46%)

Query: 154 ISYLSGNVIASDAICERIEHANRTCNIQKQLNHDLQQESLELQQRAI 200
           ++Y+   ++AS+ + E +EH  +     KQ    +  E     Q+ +
Sbjct: 455 VNYIDDLLVASETLNEHLEHLRQVFEKLKQARMTINLEKSNFIQKEV 501


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 24.2 bits (50), Expect = 0.84
 Identities = 14/43 (32%), Positives = 19/43 (44%)

Query: 67  VNVNAATQLLTVTLVAIQDTSERLRDALSKEICLVQQALEWGE 109
           VNVNA     T+  +A      +LR    KE    Q  ++ GE
Sbjct: 173 VNVNAHVAQFTLKTIAETAMGTKLRFTTRKETIYKQSIVDMGE 215


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 13/43 (30%), Positives = 19/43 (44%)

Query: 67  VNVNAATQLLTVTLVAIQDTSERLRDALSKEICLVQQALEWGE 109
           +NVNA     T+  +A      +LR    KE    Q  ++ GE
Sbjct: 173 INVNAHVAQFTLKTIAETAMGTKLRFTTRKETIYKQSIVDMGE 215


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 16/72 (22%), Positives = 35/72 (48%), Gaps = 5/72 (6%)

Query: 131  KHNLRTLISYMDYAEKLATVAAEISYLSGNVIASDAICERIEHANRTCNIQKQLNHDLQQ 190
            K +++TL +  +Y           + ++ ++ A D       H N+     ++ N+D ++
Sbjct: 1484 KSHMQTLGAKNEYGNNNVVARNHRNSVASSIPAKDVF--ENGHVNKAF---EEDNYDHRR 1538

Query: 191  ESLELQQRAIIT 202
             SL++QQR  +T
Sbjct: 1539 NSLQMQQRNNVT 1550


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 16/72 (22%), Positives = 35/72 (48%), Gaps = 5/72 (6%)

Query: 131  KHNLRTLISYMDYAEKLATVAAEISYLSGNVIASDAICERIEHANRTCNIQKQLNHDLQQ 190
            K +++TL +  +Y           + ++ ++ A D       H N+     ++ N+D ++
Sbjct: 1484 KSHMQTLGAKNEYGNNNVVARNHRNSVASSIPAKDVF--ENGHVNKAF---EEDNYDHRR 1538

Query: 191  ESLELQQRAIIT 202
             SL++QQR  +T
Sbjct: 1539 NSLQMQQRNNVT 1550


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 16/72 (22%), Positives = 35/72 (48%), Gaps = 5/72 (6%)

Query: 131  KHNLRTLISYMDYAEKLATVAAEISYLSGNVIASDAICERIEHANRTCNIQKQLNHDLQQ 190
            K +++TL +  +Y           + ++ ++ A D       H N+     ++ N+D ++
Sbjct: 1484 KSHMQTLGAKNEYGNNNVVARNHRNSVASSIPAKDVF--ENGHVNKAF---EEDNYDHRR 1538

Query: 191  ESLELQQRAIIT 202
             SL++QQR  +T
Sbjct: 1539 NSLQMQQRNNVT 1550


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 16/72 (22%), Positives = 35/72 (48%), Gaps = 5/72 (6%)

Query: 131  KHNLRTLISYMDYAEKLATVAAEISYLSGNVIASDAICERIEHANRTCNIQKQLNHDLQQ 190
            K +++TL +  +Y           + ++ ++ A D       H N+     ++ N+D ++
Sbjct: 1484 KSHMQTLGAKNEYGNNNVVARNHRNSVASSIPAKDVF--ENGHVNKAF---EEDNYDHRR 1538

Query: 191  ESLELQQRAIIT 202
             SL++QQR  +T
Sbjct: 1539 NSLQMQQRNNVT 1550


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 10/40 (25%), Positives = 19/40 (47%)

Query: 30  IPIALGIFSAAKCDNIFDGLSSADTLEHEFLIKQATTVNV 69
           +P+  G       D   + L     ++H F I++A T+N+
Sbjct: 429 MPLLAGQLGREFFDEKLNALCMTWLMDHVFAIREAATLNL 468


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.318    0.131    0.367 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,535
Number of Sequences: 317
Number of extensions: 1618
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 8
length of query: 223
length of database: 114,650
effective HSP length: 54
effective length of query: 169
effective length of database: 97,532
effective search space: 16482908
effective search space used: 16482908
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 42 (21.0 bits)