Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002371-TA|BGIBMGA002371-PA|IPR009062|Smac/Diablo
(223 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos... 27 1.7
SPAC8C9.06c |||mitochondrial translation regulator |Schizosaccha... 27 2.2
SPCC550.03c |||RNA helicase involved in mRNA catabolism|Schizosa... 27 2.2
SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces pom... 27 2.9
SPBC16G5.15c |fkh2||fork head transcription factor Fkh2 |Schizos... 26 3.9
SPAC1A6.08c |mug125||sequence orphan|Schizosaccharomyces pombe|c... 26 3.9
SPBC106.14c |sda1||SDA1 family protein|Schizosaccharomyces pombe... 26 5.1
SPBC651.03c |gyp10||GTPase activating protein Gyp10|Schizosaccha... 25 6.8
SPAC1F12.05 |||conserved fungal protein|Schizosaccharomyces pomb... 25 6.8
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 25 6.8
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22... 25 8.9
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 25 8.9
>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1649
Score = 27.5 bits (58), Expect = 1.7
Identities = 10/18 (55%), Positives = 14/18 (77%)
Query: 154 ISYLSGNVIASDAICERI 171
+S+LS N++ S AIC RI
Sbjct: 696 LSFLSSNIVLSQAICRRI 713
>SPAC8C9.06c |||mitochondrial translation regulator
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 931
Score = 27.1 bits (57), Expect = 2.2
Identities = 13/44 (29%), Positives = 22/44 (50%)
Query: 113 PPHHWDQLVAIRGSLSDLKHNLRTLISYMDYAEKLATVAAEISY 156
PP + L+ SL D+K + L +Y++Y K T +I +
Sbjct: 683 PPSLFSSLIKEYTSLGDIKEAKQVLSTYLEYFSKNITSKPDIPF 726
>SPCC550.03c |||RNA helicase involved in mRNA
catabolism|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1213
Score = 27.1 bits (57), Expect = 2.2
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 16 THVTLAGRGTRNFRIPIALGIFSAAKCDNIFDGLSSADTLEHE 58
T V L G + +P+ + +FS +C+ D L++ D H+
Sbjct: 537 TWVHLIGHLHKQNLLPVIVFVFSKKRCEEYVDTLTNRDLNNHQ 579
>SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1067
Score = 26.6 bits (56), Expect = 2.9
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 44 NIFDGLSSA--DTLEHEFLIKQATTVNVNAATQLLTVTLVAIQDTSERLRDALSKEICLV 101
NIF+ + DTLE E+ AT + N A + T V + D E+L + + E+
Sbjct: 736 NIFEAVRKCTFDTLEEEYEKTVATDILRNFAESIKTCGPVVLGDDYEKLCEVV-MEVLQK 794
Query: 102 QQALEWGE 109
Q ++ G+
Sbjct: 795 QHIVQAGD 802
>SPBC16G5.15c |fkh2||fork head transcription factor Fkh2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 26.2 bits (55), Expect = 3.9
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 85 DTSERLRDALSKEI-CLVQQALEWGEEGTPPHHWDQLVA 122
D S DA+ EI V A E+G+ PP+ + ++A
Sbjct: 195 DESTIKEDAIKSEISAAVNDAAEYGDNKKPPYSYSVMIA 233
>SPAC1A6.08c |mug125||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 285
Score = 26.2 bits (55), Expect = 3.9
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
Query: 147 LATVAAEISYLSGNVIASDAICERIEHANRTCNIQKQLNHDLQQESLELQQRAIITSPQL 206
L+T A ISY+ GN A+ ++ + ++K+ N Q +S L S +L
Sbjct: 88 LSTKCARISYMQGNKDTKTALTKKYKSNEDVSRMRKKGNKYPQCKSKNLYD-----SLKL 142
Query: 207 EEKLKQDSAKDKSN 220
EE ++ S K N
Sbjct: 143 EECIESWSLNQKQN 156
>SPBC106.14c |sda1||SDA1 family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 719
Score = 25.8 bits (54), Expect = 5.1
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 168 CERIEHANRTCNIQKQLNHDLQQESLELQQRAIITSP-QLEEKL 210
C I+ ++TCN + D E +EL Q+ P +L EK+
Sbjct: 58 CSLIDFISQTCNYYHDVTADFPSELIELLQKNHTIFPFELCEKI 101
>SPBC651.03c |gyp10||GTPase activating protein
Gyp10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 373
Score = 25.4 bits (53), Expect = 6.8
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 50 SSADTLEHEFLIKQATTVNVNAATQLLTVTLVAIQDTSERL-RDALSKEICLVQQALEW 107
S AD L H +L K ++NVN + T+ A+ +S L R +S CL W
Sbjct: 247 SGADLL-HSYLCKLPASINVNQLIKNTCATISAVPFSSLPLDRYQISPYSCLRNTGDPW 304
>SPAC1F12.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 377
Score = 25.4 bits (53), Expect = 6.8
Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 28 FRIPIALGIFSAAKCDNIFDGLSSADTLEHEFLIKQATTVNVNA 71
F IPI+ + S CD FDG S + H+ +++ +N+
Sbjct: 264 FEIPISTSLLSKPICDVSFDGQFSL-YIAHQLILETIVVEVMNS 306
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 25.4 bits (53), Expect = 6.8
Identities = 22/93 (23%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 124 RGSLSDLKHNLRTLISYMDYAEKLATVAAEISYLSGNVIASDAICERIEHANRTCNIQKQ 183
+ S S+++ +L + + E L T I+ ++ ER+ + + + KQ
Sbjct: 844 QNSKSEVERDLVETNNSLTAVENLLTTERAIALDKEEILRRTQ--ERLANIEDSFSETKQ 901
Query: 184 LNHDLQQESLELQQRAIITSPQLEEKLKQDSAK 216
N +LQ+ES L+Q + +LE +L + ++K
Sbjct: 902 QNENLQRESASLKQ----INNELESELLEKTSK 930
>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
Snf22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1680
Score = 25.0 bits (52), Expect = 8.9
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Query: 160 NVIASDAICERIEHANRTCNIQKQLNHDLQQESLELQQRAIITSPQLEEKLKQDSAKDKS 219
N++ + A ++ EHA R +K L H S+ L +++I+T + K K KD
Sbjct: 695 NLVLALAEKQKTEHAMR--QKEKLLTH---LRSIMLHRKSIVTKVDKQNKAKTQRCKDII 749
Query: 220 N 220
N
Sbjct: 750 N 750
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 25.0 bits (52), Expect = 8.9
Identities = 21/92 (22%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 130 LKHNLRTLISYMDYAEKLATVAAEISYLSGNVIASDAICERIEHANRTCNIQKQLNHDLQ 189
L+ +++ + S ++ + A +IS L A + E++ NR I K+ +DL+
Sbjct: 219 LEESIKQVSSSIELEKINAEQRLQISELEKLKAAQEERIEKLSSNNRNVEILKEEKNDLE 278
Query: 190 QESLELQQ-RAIITSPQLE-EKLKQDSAKDKS 219
+ ++ R + + +LE EK++ + KS
Sbjct: 279 SKLYRFEEYRDKVATLELENEKIQTELNSWKS 310
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.131 0.367
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 885,041
Number of Sequences: 5004
Number of extensions: 32184
Number of successful extensions: 116
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 111
Number of HSP's gapped (non-prelim): 13
length of query: 223
length of database: 2,362,478
effective HSP length: 70
effective length of query: 153
effective length of database: 2,012,198
effective search space: 307866294
effective search space used: 307866294
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 52 (25.0 bits)
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