Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002371-TA|BGIBMGA002371-PA|IPR009062|Smac/Diablo
(223 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0533 + 24734177-24735787 31 0.99
09_02_0417 - 8915604-8916779,8916863-8917270 29 2.3
11_04_0438 - 17737040-17737122,17737373-17737496,17737897-177381... 29 4.0
09_02_0414 - 8825575-8826654,8826737-8827144 29 4.0
02_05_0455 - 29154374-29155136,29155257-29156455,29156904-291570... 29 4.0
10_08_0520 - 18495118-18498237 28 5.3
06_01_0605 + 4373697-4373872,4374840-4374876,4375296-4375399,437... 28 5.3
04_04_1614 + 34786296-34786315,34787432-34788347,34788426-347889... 28 5.3
12_01_0582 - 4752576-4752786,4752955-4753037,4753324-4753530,475... 28 7.0
10_08_0841 - 20948719-20948919,20949624-20950388,20950475-209510... 28 7.0
05_01_0197 - 1417672-1417899,1418921-1418974,1419267-1419552,142... 28 7.0
02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,162... 28 7.0
>11_06_0533 + 24734177-24735787
Length = 536
Score = 30.7 bits (66), Expect = 0.99
Identities = 17/68 (25%), Positives = 33/68 (48%)
Query: 145 EKLATVAAEISYLSGNVIASDAICERIEHANRTCNIQKQLNHDLQQESLELQQRAIITSP 204
E LAT AE++ +S N+ SDA+ ++E N ++ +E+ +R
Sbjct: 182 ELLATKEAELAAISANLAESDAMVAQLEEQNSQLRAERGELEKRLEETKASSRRVHTQKT 241
Query: 205 QLEEKLKQ 212
++EE ++
Sbjct: 242 EVEESFEE 249
>09_02_0417 - 8915604-8916779,8916863-8917270
Length = 527
Score = 29.5 bits (63), Expect = 2.3
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 163 ASDAICERIEHANRTCNIQKQLNHDLQQESLELQQRAIITSPQLE-EKLKQDSAKDK 218
AS + CE E ++Q LN+D + S E+Q R ++ QLE ++KQ+ A++K
Sbjct: 429 ASSSSCEVQEDIKHAMHLQTMLNNDRVKMS-EVQLR--LSKEQLELARIKQEEAREK 482
>11_04_0438 -
17737040-17737122,17737373-17737496,17737897-17738182,
17738265-17738397,17738742-17738953,17739455-17739816,
17739907-17739937,17744738-17745111
Length = 534
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/58 (25%), Positives = 25/58 (43%)
Query: 129 DLKHNLRTLISYMDYAEKLATVAAEISYLSGNVIASDAICERIEHANRTCNIQKQLNH 186
++++ R L Y A +SY G A+C R+EHA+ +I +H
Sbjct: 137 EIQNRSRNLTVYASKVVDSVAYNAMLSYPEGQQEKCVAVCRRLEHAHALFDILASCSH 194
>09_02_0414 - 8825575-8826654,8826737-8827144
Length = 495
Score = 28.7 bits (61), Expect = 4.0
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 163 ASDAICERIEHANRTCNIQKQLNHDLQQESLELQQRAIITSPQLE-EKLKQDSAKDK 218
AS + CE E +Q LN+D ++ S E+Q R ++ QLE ++KQD A K
Sbjct: 397 ASSSSCEVQEDIKHALYLQTMLNNDREKMS-EVQLR--LSKEQLELARIKQDEANVK 450
>02_05_0455 -
29154374-29155136,29155257-29156455,29156904-29157011,
29157129-29157314,29157761-29157859,29159613-29159773,
29160856-29160913
Length = 857
Score = 28.7 bits (61), Expect = 4.0
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 7/63 (11%)
Query: 69 VNAATQLLTVTLVAIQDTSERLRDALSKEICLVQQALEWGEEGTPPHHWDQLVAIRGSLS 128
V + L +T AI ER+RD+L + + L+ E PP +Q+V + L
Sbjct: 161 VECSKLYLAITGEAIVSRCERIRDSLRRSLFLI-------ENMVPPALANQIVDVHDDLG 213
Query: 129 DLK 131
D+K
Sbjct: 214 DIK 216
>10_08_0520 - 18495118-18498237
Length = 1039
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/51 (33%), Positives = 29/51 (56%)
Query: 119 QLVAIRGSLSDLKHNLRTLISYMDYAEKLATVAAEISYLSGNVIASDAICE 169
QL G+ L + LR ++Y AE L ++A+ +L+G+V A+ AI +
Sbjct: 673 QLEKSHGTKESLYNLLRKAVTYNPRAEVLWLMSAKEKWLAGDVPAARAILQ 723
>06_01_0605 +
4373697-4373872,4374840-4374876,4375296-4375399,
4375942-4376137,4376385-4376451,4376895-4376998,
4377090-4377174,4377309-4377369,4377694-4377825,
4377924-4377993,4379261-4379413,4379583-4379694,
4379779-4379920,4380023-4380140,4380862-4380957,
4381061-4381189
Length = 593
Score = 28.3 bits (60), Expect = 5.3
Identities = 36/150 (24%), Positives = 63/150 (42%), Gaps = 8/150 (5%)
Query: 57 HEFL--IKQATTVNVNAATQLLTVTLVAIQDTSERLRDALSKEICLVQQALEWGEEGTPP 114
H+FL Q N+ +A LL V +Q + L L+Q A E E+G
Sbjct: 356 HQFLKIACQLERKNIASAYSLLRVIESELQSYLSAVNTRLGHCTSLIQAATEVREQGAID 415
Query: 115 HHWDQLVAIRGSLSDLKHNLRTLISYMDYAEKLATVAAEISYLSGNVIASDAICERIEHA 174
L A+R L + T+ +YM + +IS L ++++ + E A
Sbjct: 416 DRDTLLHAVRDLLCVHSNVQATMPTYM----SAHALVQQISALQSDLLSLQSELESALPA 471
Query: 175 NRTCNIQKQLNHDLQQES--LELQQRAIIT 202
+R I + ++ DL + + L L R +++
Sbjct: 472 DRKRCINELVSSDLSKPTHILGLVNRTVVS 501
>04_04_1614 +
34786296-34786315,34787432-34788347,34788426-34788950,
34789065-34789442,34790435-34790740
Length = 714
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 110 EGTPPHHW-DQLVAIRGSLSDLKHNLRTLISYMDYAEKLATVAAEISYLSGNVIAS 164
+GTP W DQ++A G L+H+L T ++ K+ V ++ S + + I S
Sbjct: 293 KGTPRLPWFDQVLADIGDHQSLEHSLSTFSGHISRLRKIVQVVSKDSLVLIDEIGS 348
>12_01_0582 -
4752576-4752786,4752955-4753037,4753324-4753530,
4755128-4755207,4756853-4756998,4757088-4757719
Length = 452
Score = 27.9 bits (59), Expect = 7.0
Identities = 20/98 (20%), Positives = 47/98 (47%), Gaps = 13/98 (13%)
Query: 118 DQLVAIRGSLSDLKHNLRTLISYMDYAEKLATVAAEISYLSGNV-------IASDAICER 170
D++V +RG + KH L+ + + K A++ E++ N DA+ +
Sbjct: 153 DEIVQLRGEID--KH----LVVRKELSAKSASIMHELTREQSNKQQIPMLKAEIDALRQE 206
Query: 171 IEHANRTCNIQKQLNHDLQQESLELQQRAIITSPQLEE 208
+ HA C ++++ N L ++ +++ I + ++E+
Sbjct: 207 LVHARSACELEQKGNFQLVEQKKAMEKNMISMAQEIEQ 244
>10_08_0841 -
20948719-20948919,20949624-20950388,20950475-20951023,
20951097-20951237,20951313-20951519,20951556-20951724,
20951899-20952003,20952087-20952208,20952291-20952412,
20953234-20953516
Length = 887
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Query: 63 QATTVNVNAATQLLTVTLVAIQ----DTSERLRDALSKEICLVQQALEWG 108
+ T N QLL + A++ D S +L D +++ L QQA+E+G
Sbjct: 402 EETLAKANVEIQLLKEEMDALKHNRDDLSSKLSDVSEQKVTLEQQAVEYG 451
>05_01_0197 -
1417672-1417899,1418921-1418974,1419267-1419552,
1421768-1422291
Length = 363
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/60 (25%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 132 HNLRTLISYMDYAEKLATVAAEISYLSGNVIASDAICERIEHANRTCNIQKQLNHDLQQE 191
H LR +S M A+ A + +++S + N++ + ++ + +E C I N+ L+ E
Sbjct: 232 HKLRVFLSSMA-AKPEAQMGSDVSCSTKNIVPASSVAQLMESVMAVCRIFGYRNNLLKME 290
>02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,
1625603-1625887,1626016-1626030,1626339-1626419,
1626909-1627322,1627423-1627719,1627801-1629864
Length = 3057
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/57 (28%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 169 ERIEHANRTCNIQKQLNHDLQ---QESLELQQRAIITSPQLEEKLKQDSAKDKSNAK 222
E++E + T K+ ++D++ Q+SLE + + LE + QD+A+D+ ++K
Sbjct: 2557 EKVEGSEETKEPVKEQSYDVEMDVQKSLETDEELKRNTCDLEAPVYQDNAQDEISSK 2613
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.131 0.367
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,485,896
Number of Sequences: 37544
Number of extensions: 193911
Number of successful extensions: 582
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 578
Number of HSP's gapped (non-prelim): 14
length of query: 223
length of database: 14,793,348
effective HSP length: 79
effective length of query: 144
effective length of database: 11,827,372
effective search space: 1703141568
effective search space used: 1703141568
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 58 (27.5 bits)
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