Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002371-TA|BGIBMGA002371-PA|IPR009062|Smac/Diablo
(223 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80442-5|AAB37668.2| 794|Caenorhabditis elegans Hypothetical pr... 29 2.0
U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical pr... 29 2.7
U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z81050-7|CAB02856.1| 713|Caenorhabditis elegans Hypothetical pr... 29 3.5
AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical ... 28 6.2
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 27 8.1
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 27 8.1
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 27 8.1
>U80442-5|AAB37668.2| 794|Caenorhabditis elegans Hypothetical
protein T20F5.6 protein.
Length = 794
Score = 29.5 bits (63), Expect = 2.0
Identities = 20/72 (27%), Positives = 38/72 (52%)
Query: 151 AAEISYLSGNVIASDAICERIEHANRTCNIQKQLNHDLQQESLELQQRAIITSPQLEEKL 210
A + + L+ + ++AI R AN NI+K+ +H ESL ++ +S +L + L
Sbjct: 292 AVDEALLAFDKTKAEAIDHRRRMANALVNIRKEADHPDFYESLNRFMSSMKSSGELFKTL 351
Query: 211 KQDSAKDKSNAK 222
D K ++++K
Sbjct: 352 SSDLDKFENSSK 363
>U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical protein
R07G3.3a protein.
Length = 1982
Score = 29.1 bits (62), Expect = 2.7
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 145 EKLATVAA--EISYLSGNVIA-SDAICERIEHANRTCNIQKQLNHDLQQESLELQ-QRAI 200
EK+AT AA E + L + A +D + +Q QL H +Q+E +L+ QR+
Sbjct: 1194 EKIATTAALVEKASLMEKIQALTDVHNINAKLTEEKTKLQAQL-HQIQKEKADLENQRSR 1252
Query: 201 ITSPQLEEKLKQDSAKDKSNAK 222
+++ E+KLK S+ ++N +
Sbjct: 1253 LSASNEEQKLKIASSDQEANQR 1274
>U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical protein
R07G3.3b protein.
Length = 1987
Score = 29.1 bits (62), Expect = 2.7
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 145 EKLATVAA--EISYLSGNVIA-SDAICERIEHANRTCNIQKQLNHDLQQESLELQ-QRAI 200
EK+AT AA E + L + A +D + +Q QL H +Q+E +L+ QR+
Sbjct: 1194 EKIATTAALVEKASLMEKIQALTDVHNINAKLTEEKTKLQAQL-HQIQKEKADLENQRSR 1252
Query: 201 ITSPQLEEKLKQDSAKDKSNAK 222
+++ E+KLK S+ ++N +
Sbjct: 1253 LSASNEEQKLKIASSDQEANQR 1274
>Z81050-7|CAB02856.1| 713|Caenorhabditis elegans Hypothetical
protein C50B6.7 protein.
Length = 713
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 24 GTRNFR-IPIALGIFSAAKCDNIFDGLSSADTLEHEFLIKQATTVNVNAATQLLTVTLVA 82
G ++F +P +LG F+ KCD G ++ EH + +++N A+ + +VA
Sbjct: 148 GVQSFPGVPYSLGDFNNPKCDGDIQGSDYQNSAEHVKDCRLVGLLDLNQASATVRAKIVA 207
>AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical
protein Y40C7B.1 protein.
Length = 916
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/42 (28%), Positives = 23/42 (54%)
Query: 181 QKQLNHDLQQESLELQQRAIITSPQLEEKLKQDSAKDKSNAK 222
+KQ+N D ++ LE QR + + KL+++ A +S +
Sbjct: 262 EKQINDDFEKRKLEKLQREKLFEKNKQAKLQREKAHQESERR 303
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Query: 106 EWGEEGTPPHHWDQLVAIRGSLSDLKHNLRTLISYMDYAEKLATVA 151
E E+G+ P WDQ+ R D+ H L L YA ++ V+
Sbjct: 1261 EISEDGSEPATWDQVTIAR---DDVNHKLANLEPKKTYAIRVQAVS 1303
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
protein K07E12.1a protein.
Length = 13100
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Query: 106 EWGEEGTPPHHWDQLVAIRGSLSDLKHNLRTLISYMDYAEKLATVA 151
E E+G+ P WDQ+ R D+ H L L YA ++ V+
Sbjct: 1324 EISEDGSEPATWDQVTIAR---DDVNHKLANLEPKKTYAIRVQAVS 1366
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
protein.
Length = 13100
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Query: 106 EWGEEGTPPHHWDQLVAIRGSLSDLKHNLRTLISYMDYAEKLATVA 151
E E+G+ P WDQ+ R D+ H L L YA ++ V+
Sbjct: 1324 EISEDGSEPATWDQVTIAR---DDVNHKLANLEPKKTYAIRVQAVS 1366
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.318 0.131 0.367
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,772,946
Number of Sequences: 27539
Number of extensions: 174060
Number of successful extensions: 613
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 609
Number of HSP's gapped (non-prelim): 9
length of query: 223
length of database: 12,573,161
effective HSP length: 79
effective length of query: 144
effective length of database: 10,397,580
effective search space: 1497251520
effective search space used: 1497251520
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 58 (27.5 bits)
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