Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002369-TA|BGIBMGA002369-PA|IPR001965|Zinc finger,
PHD-type, IPR011011|Zinc finger, FYVE/PHD-type
(98 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032644-4|CAA21665.1| 490|Caenorhabditis elegans Hypothetical ... 60 2e-10
CU457744-3|CAM36369.1| 247|Caenorhabditis elegans Hypothetical ... 55 7e-09
AF099926-2|AAK73894.1| 247|Caenorhabditis elegans Hypothetical ... 55 7e-09
Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical pr... 44 2e-05
Z81515-10|CAH60782.1| 413|Caenorhabditis elegans Hypothetical p... 38 9e-04
Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical pr... 38 9e-04
Z81515-8|CAB54234.3| 692|Caenorhabditis elegans Hypothetical pr... 38 9e-04
Z81515-7|CAB04195.1| 510|Caenorhabditis elegans Hypothetical pr... 38 9e-04
Z81515-6|CAB04198.1| 405|Caenorhabditis elegans Hypothetical pr... 38 9e-04
U20555-1|AAC46918.1| 839|Caenorhabditis elegans zinc finger pro... 37 0.003
L23645-4|AAK26137.1| 867|Caenorhabditis elegans Zinc finger pro... 37 0.003
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ... 36 0.006
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein. 36 0.006
AF067622-3|ABD63225.1| 447|Caenorhabditis elegans Hypothetical ... 35 0.008
Z68105-2|CAA92118.1| 270|Caenorhabditis elegans Hypothetical pr... 34 0.014
Z50742-5|CAA90618.2| 650|Caenorhabditis elegans Hypothetical pr... 34 0.019
U70849-11|AAK29800.1| 897|Caenorhabditis elegans Hypothetical p... 33 0.033
U70849-10|AAK29799.1| 910|Caenorhabditis elegans Hypothetical p... 33 0.033
Z81016-2|CAB02663.1| 246|Caenorhabditis elegans Hypothetical pr... 33 0.043
AF025457-7|AAB70967.1| 431|Caenorhabditis elegans Hypothetical ... 31 0.13
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr... 31 0.17
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr... 31 0.17
Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical pr... 31 0.17
Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical pr... 31 0.17
AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein. 31 0.17
AF163019-1|AAD49324.1| 1312|Caenorhabditis elegans trithorax-rel... 30 0.23
AF039718-1|AAB96746.1| 1312|Caenorhabditis elegans Abnormal cell... 30 0.23
U55854-4|AAK68160.1| 280|Caenorhabditis elegans Hypothetical pr... 30 0.30
Z82273-1|CAB54978.2| 565|Caenorhabditis elegans Hypothetical pr... 29 0.53
Z82263-7|CAJ76937.1| 565|Caenorhabditis elegans Hypothetical pr... 29 0.53
Z69385-3|CAA93426.2| 1477|Caenorhabditis elegans Hypothetical pr... 29 0.70
AF077536-2|AAK31410.2| 527|Caenorhabditis elegans Hypothetical ... 28 0.93
U13646-6|AAC24421.2| 1376|Caenorhabditis elegans Flectin protein... 28 1.2
Z83317-2|CAB05899.1| 470|Caenorhabditis elegans Hypothetical pr... 26 5.0
Z83317-1|CAB05898.1| 510|Caenorhabditis elegans Hypothetical pr... 26 5.0
Z82263-4|CAB62794.1| 316|Caenorhabditis elegans Hypothetical pr... 26 5.0
AL132859-4|CAB60492.1| 365|Caenorhabditis elegans Hypothetical ... 26 5.0
AL117204-13|CAB55128.1| 286|Caenorhabditis elegans Hypothetical... 26 5.0
AC024135-1|AAY86224.1| 300|Caenorhabditis elegans Hypothetical ... 26 5.0
AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical ... 26 5.0
>AL032644-4|CAA21665.1| 490|Caenorhabditis elegans Hypothetical
protein Y51H1A.4 protein.
Length = 490
Score = 60.5 bits (140), Expect = 2e-10
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 26 ESEYCYCGKFISESRMIGCDEPKCSFQWYHFQCVGIKVPPPGNWFCPEC 74
E +C+C + S M+ CD C+ +W+H+ C+G+ PP G W+CP C
Sbjct: 427 EMHWCFCNEK-SYGDMVQCDNRHCTLRWFHYPCIGMVEPPTGKWYCPRC 474
>CU457744-3|CAM36369.1| 247|Caenorhabditis elegans Hypothetical
protein T06A10.4 protein.
Length = 247
Score = 55.2 bits (127), Expect = 7e-09
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 14 EPE-EQSQYSPKRESEYCYCGKFISESRMIGCDEPKCSFQWYHFQCVGIKVPPPGNWFCP 72
+PE E++ + + YC+C + MI C+ P C + W+HF C+G+ P G+W+C
Sbjct: 161 KPESEKAVAAAEPPKMYCWC-QLDKNDTMIECENPGCKYGWFHFTCIGMITAPAGDWYCT 219
Query: 73 -EC 74
EC
Sbjct: 220 NEC 222
>AF099926-2|AAK73894.1| 247|Caenorhabditis elegans Hypothetical
protein T06A10.4 protein.
Length = 247
Score = 55.2 bits (127), Expect = 7e-09
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 14 EPE-EQSQYSPKRESEYCYCGKFISESRMIGCDEPKCSFQWYHFQCVGIKVPPPGNWFCP 72
+PE E++ + + YC+C + MI C+ P C + W+HF C+G+ P G+W+C
Sbjct: 161 KPESEKAVAAAEPPKMYCWC-QLDKNDTMIECENPGCKYGWFHFTCIGMITAPAGDWYCT 219
Query: 73 -EC 74
EC
Sbjct: 220 NEC 222
>Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical
protein C11G6.3 protein.
Length = 385
Score = 43.6 bits (98), Expect = 2e-05
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Query: 39 SRMIGCDEPKCSFQWYHFQCVGIKV-PPPGNWFCPECIKLRRKKR 82
+ MIGCD+ C W+H+ CVG+ P WFC C K + K+
Sbjct: 321 ANMIGCDQ--CQ-DWFHWHCVGLTAEPTDSKWFCTRCTKGNKSKK 362
>Z81515-10|CAH60782.1| 413|Caenorhabditis elegans Hypothetical
protein F26H11.2g protein.
Length = 413
Score = 38.3 bits (85), Expect = 9e-04
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 7/62 (11%)
Query: 28 EYCYCGKFISESRM-IGCDEPKCSFQWYHFQCVGI---KVPPPGNWFCPECIKLRRKKRR 83
E+C C K S++ I C+ C+ +WYH CVG+ + +W C ECI+ + + +
Sbjct: 119 EHCTCQKIFDASKLYIQCE--LCA-RWYHGDCVGVAEQTILGLEHWSCEECIEEQERVKD 175
Query: 84 RP 85
+P
Sbjct: 176 QP 177
>Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical protein
F26H11.2c protein.
Length = 2266
Score = 38.3 bits (85), Expect = 9e-04
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 7/62 (11%)
Query: 28 EYCYCGKFISESRM-IGCDEPKCSFQWYHFQCVGI---KVPPPGNWFCPECIKLRRKKRR 83
E+C C K S++ I C+ C+ +WYH CVG+ + +W C ECI+ + + +
Sbjct: 1972 EHCTCQKIFDASKLYIQCE--LCA-RWYHGDCVGVAEQTILGLEHWSCEECIEEQERVKD 2028
Query: 84 RP 85
+P
Sbjct: 2029 QP 2030
>Z81515-8|CAB54234.3| 692|Caenorhabditis elegans Hypothetical
protein F26H11.2d protein.
Length = 692
Score = 38.3 bits (85), Expect = 9e-04
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 7/62 (11%)
Query: 28 EYCYCGKFISESRM-IGCDEPKCSFQWYHFQCVGI---KVPPPGNWFCPECIKLRRKKRR 83
E+C C K S++ I C+ C+ +WYH CVG+ + +W C ECI+ + + +
Sbjct: 398 EHCTCQKIFDASKLYIQCE--LCA-RWYHGDCVGVAEQTILGLEHWSCEECIEEQERVKD 454
Query: 84 RP 85
+P
Sbjct: 455 QP 456
>Z81515-7|CAB04195.1| 510|Caenorhabditis elegans Hypothetical
protein F26H11.2f protein.
Length = 510
Score = 38.3 bits (85), Expect = 9e-04
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 7/62 (11%)
Query: 28 EYCYCGKFISESRM-IGCDEPKCSFQWYHFQCVGI---KVPPPGNWFCPECIKLRRKKRR 83
E+C C K S++ I C+ C+ +WYH CVG+ + +W C ECI+ + + +
Sbjct: 216 EHCTCQKIFDASKLYIQCE--LCA-RWYHGDCVGVAEQTILGLEHWSCEECIEEQERVKD 272
Query: 84 RP 85
+P
Sbjct: 273 QP 274
>Z81515-6|CAB04198.1| 405|Caenorhabditis elegans Hypothetical
protein F26H11.2e protein.
Length = 405
Score = 38.3 bits (85), Expect = 9e-04
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 7/62 (11%)
Query: 28 EYCYCGKFISESRM-IGCDEPKCSFQWYHFQCVGI---KVPPPGNWFCPECIKLRRKKRR 83
E+C C K S++ I C+ C+ +WYH CVG+ + +W C ECI+ + + +
Sbjct: 111 EHCTCQKIFDASKLYIQCE--LCA-RWYHGDCVGVAEQTILGLEHWSCEECIEEQERVKD 167
Query: 84 RP 85
+P
Sbjct: 168 QP 169
>U20555-1|AAC46918.1| 839|Caenorhabditis elegans zinc finger
protein protein.
Length = 839
Score = 36.7 bits (81), Expect = 0.003
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 37 SESRMIGCDEPKCSFQWYHFQCVGIKVPPPGNWFCPECIK 76
+++ +I CD C H C GI+ P G WFC +C K
Sbjct: 18 TDNPLIYCDGENCEVA-VHQGCYGIQEVPEGEWFCAKCTK 56
>L23645-4|AAK26137.1| 867|Caenorhabditis elegans Zinc finger
protein protein 1,isoform a protein.
Length = 867
Score = 36.7 bits (81), Expect = 0.003
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 37 SESRMIGCDEPKCSFQWYHFQCVGIKVPPPGNWFCPECIK 76
+++ +I CD C H C GI+ P G WFC +C K
Sbjct: 18 TDNPLIYCDGENCEVA-VHQGCYGIQEVPEGEWFCAKCTK 56
>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
protein.
Length = 1829
Score = 35.5 bits (78), Expect = 0.006
Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Query: 12 DYEPEEQSQYSPKRESEYCYCGKFISESRMIGCDEPKCSFQWYHFQCVGIKVPPPGNWFC 71
++ PE + K+ E+C K ++ CD CSF Y +VP W C
Sbjct: 302 EHGPEVVKEEPAKQNDEFCKICK--ETENLLLCDSCVCSFHAYCIDPPLTEVPKEETWSC 359
Query: 72 PEC 74
P C
Sbjct: 360 PRC 362
Score = 31.9 bits (69), Expect = 0.075
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Query: 31 YCGKFISESRMIGCDEPKCSFQWYHFQCV--GIKVPPPGNWFCPECIK 76
YC + + ++ CD C + YH C+ ++ PP G+W C CI+
Sbjct: 258 YCEECKQDGELLLCDT--CP-RAYHTVCIDENMEEPPEGDWSCAHCIE 302
>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
Length = 1829
Score = 35.5 bits (78), Expect = 0.006
Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Query: 12 DYEPEEQSQYSPKRESEYCYCGKFISESRMIGCDEPKCSFQWYHFQCVGIKVPPPGNWFC 71
++ PE + K+ E+C K ++ CD CSF Y +VP W C
Sbjct: 302 EHGPEVVKEEPAKQNDEFCKICK--ETENLLLCDSCVCSFHAYCIDPPLTEVPKEETWSC 359
Query: 72 PEC 74
P C
Sbjct: 360 PRC 362
Score = 31.9 bits (69), Expect = 0.075
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Query: 31 YCGKFISESRMIGCDEPKCSFQWYHFQCV--GIKVPPPGNWFCPECIK 76
YC + + ++ CD C + YH C+ ++ PP G+W C CI+
Sbjct: 258 YCEECKQDGELLLCDT--CP-RAYHTVCIDENMEEPPEGDWSCAHCIE 302
>AF067622-3|ABD63225.1| 447|Caenorhabditis elegans Hypothetical
protein F33E11.6b protein.
Length = 447
Score = 35.1 bits (77), Expect = 0.008
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Query: 32 CGKFISESRMIGCDEPKCSFQWYHFQCVGIKVPPPGNWFCPECIKLRRKKRRR 84
C K E ++ CD +C + +H CVG+K P G W C + K R
Sbjct: 386 CNKPEKEDEIVFCD--RCD-RGFHTYCVGLKKLPQGTWICDTYCAIENMKFNR 435
>Z68105-2|CAA92118.1| 270|Caenorhabditis elegans Hypothetical
protein F13E6.3 protein.
Length = 270
Score = 34.3 bits (75), Expect = 0.014
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Query: 10 TEDYEPEEQSQYSPKRESEYCYCGKFISESRMIGCDEPKCSFQWYHFQCVGIKVPP-PGN 68
+E+ EP E P + C + ++ C C QW H CVGIK+
Sbjct: 202 SENKEPSESPTADPTMKKPLWPCAVCNASAKFGSCKCKGCD-QWSHLTCVGIKMKDFTEG 260
Query: 69 WFCPEC 74
W C C
Sbjct: 261 WKCGAC 266
>Z50742-5|CAA90618.2| 650|Caenorhabditis elegans Hypothetical
protein K09A11.5 protein.
Length = 650
Score = 33.9 bits (74), Expect = 0.019
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 10/81 (12%)
Query: 10 TEDYEPEEQSQYSPKRESEYCYCGKFISESRMIGCDEPKCSFQWYHFQCVGIKVPPPGN- 68
++D+E ++ +++ K + C C + ++ C SF H +C+G P N
Sbjct: 34 SQDHESDDDAEWDYKEQKACCICAR---RGEVLWCHSCPASF---HIKCLGYDTDPQPNG 87
Query: 69 --WFCPECIKLRRKKRRR-PE 86
+ C C K+ + R++ PE
Sbjct: 88 TIFTCRRCQKITKTDRKKIPE 108
>U70849-11|AAK29800.1| 897|Caenorhabditis elegans Hypothetical
protein F29B9.2b protein.
Length = 897
Score = 33.1 bits (72), Expect = 0.033
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 2 HVCHVLPITEDYEPEEQSQYSPKRESEYCYCGKFISESRMIGCDEPKCSFQWYHFQCVGI 61
H ++ + E+ + E++ K++S + F + IGCD C WYHF C G+
Sbjct: 206 HEDDLIALEEEKKKEKEKPLMSKKKSHHHKKNDF----QWIGCDS--CQ-TWYHFLCSGL 258
Query: 62 ---KVPPPGNWFCPECI 75
+ +FCP+C+
Sbjct: 259 EQFEYYLYEKFFCPKCV 275
Score = 29.1 bits (62), Expect = 0.53
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 7 LPITEDYEPEEQSQYSPKRESEYCY-CGKFISESRMIGCDEPK 48
L + D E ++ + +ES+ C CGKF E +I +E K
Sbjct: 175 LEVDSDSEEDDVPEQKTPKESDRCGGCGKFTHEDDLIALEEEK 217
>U70849-10|AAK29799.1| 910|Caenorhabditis elegans Hypothetical
protein F29B9.2a protein.
Length = 910
Score = 33.1 bits (72), Expect = 0.033
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 2 HVCHVLPITEDYEPEEQSQYSPKRESEYCYCGKFISESRMIGCDEPKCSFQWYHFQCVGI 61
H ++ + E+ + E++ K++S + F + IGCD C WYHF C G+
Sbjct: 219 HEDDLIALEEEKKKEKEKPLMSKKKSHHHKKNDF----QWIGCDS--CQ-TWYHFLCSGL 271
Query: 62 ---KVPPPGNWFCPECI 75
+ +FCP+C+
Sbjct: 272 EQFEYYLYEKFFCPKCV 288
Score = 29.1 bits (62), Expect = 0.53
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 7 LPITEDYEPEEQSQYSPKRESEYCY-CGKFISESRMIGCDEPK 48
L + D E ++ + +ES+ C CGKF E +I +E K
Sbjct: 188 LEVDSDSEEDDVPEQKTPKESDRCGGCGKFTHEDDLIALEEEK 230
>Z81016-2|CAB02663.1| 246|Caenorhabditis elegans Hypothetical
protein F21G4.4 protein.
Length = 246
Score = 32.7 bits (71), Expect = 0.043
Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 4/67 (5%)
Query: 11 EDYEPEEQSQYSPKRESEYCY-CGKFISESRMIGCDEPKCSFQWYHFQCVGIKVPP--PG 67
ED + Q +PK+++ + C S+ C C WYH CVG K P
Sbjct: 180 EDIDQYILEQAAPKKKNVTRWICPTCDKSSKFGSCGCVGCG-DWYHITCVGFKKAKEVPD 238
Query: 68 NWFCPEC 74
W C C
Sbjct: 239 KWACKYC 245
>AF025457-7|AAB70967.1| 431|Caenorhabditis elegans Hypothetical
protein C08E3.8 protein.
Length = 431
Score = 31.1 bits (67), Expect = 0.13
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 13 YEPEEQSQYSPKRESEYCYCGKFISES 39
Y P + +QYSP R+ C CG+ I S
Sbjct: 138 YRPNDTAQYSPFRQEPTCTCGRRIRTS 164
>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical
protein T12D8.1 protein.
Length = 2561
Score = 30.7 bits (66), Expect = 0.17
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 32 CGKFISESRMIGCDEPKCSFQWYHFQCVGIKVPPPGNWFCPECIKLRR 79
CG E+ ++ CDE S+ Y + + K+ P G W C C + RR
Sbjct: 569 CGTGGDEANLLLCDECDVSYHIYCMKPLLDKI-PQGPWRCQWCSRCRR 615
>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical
protein T12D8.1 protein.
Length = 2561
Score = 30.7 bits (66), Expect = 0.17
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 32 CGKFISESRMIGCDEPKCSFQWYHFQCVGIKVPPPGNWFCPECIKLRR 79
CG E+ ++ CDE S+ Y + + K+ P G W C C + RR
Sbjct: 569 CGTGGDEANLLLCDECDVSYHIYCMKPLLDKI-PQGPWRCQWCSRCRR 615
>Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 30.7 bits (66), Expect = 0.17
Identities = 10/23 (43%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
Query: 54 YHFQCV--GIKVPPPGNWFCPEC 74
YH C+ ++ PP G+W CP C
Sbjct: 287 YHVACIDENMEQPPEGDWSCPHC 309
Score = 30.7 bits (66), Expect = 0.17
Identities = 19/70 (27%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
Query: 8 PITEDYEPEEQSQYSPKRESEYCYCGKFISESRMIGCDEPKCSFQWYHFQCVGIKVP--P 65
P E++ P+ ++ YC S ++ CD S YH C+ + P
Sbjct: 307 PHCEEHGPDVLIVEEEPAKANMDYCRICKETSNILLCDTCPSS---YHAYCIDPPLTEIP 363
Query: 66 PGNWFCPECI 75
G W CP CI
Sbjct: 364 EGEWSCPRCI 373
>Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 30.7 bits (66), Expect = 0.17
Identities = 10/23 (43%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
Query: 54 YHFQCV--GIKVPPPGNWFCPEC 74
YH C+ ++ PP G+W CP C
Sbjct: 287 YHVACIDENMEQPPEGDWSCPHC 309
Score = 30.7 bits (66), Expect = 0.17
Identities = 19/70 (27%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
Query: 8 PITEDYEPEEQSQYSPKRESEYCYCGKFISESRMIGCDEPKCSFQWYHFQCVGIKVP--P 65
P E++ P+ ++ YC S ++ CD S YH C+ + P
Sbjct: 307 PHCEEHGPDVLIVEEEPAKANMDYCRICKETSNILLCDTCPSS---YHAYCIDPPLTEIP 363
Query: 66 PGNWFCPECI 75
G W CP CI
Sbjct: 364 EGEWSCPRCI 373
>AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.
Length = 1787
Score = 30.7 bits (66), Expect = 0.17
Identities = 10/23 (43%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
Query: 54 YHFQCV--GIKVPPPGNWFCPEC 74
YH C+ ++ PP G+W CP C
Sbjct: 287 YHVACIDENMEQPPEGDWSCPHC 309
Score = 30.7 bits (66), Expect = 0.17
Identities = 19/70 (27%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
Query: 8 PITEDYEPEEQSQYSPKRESEYCYCGKFISESRMIGCDEPKCSFQWYHFQCVGIKVP--P 65
P E++ P+ ++ YC S ++ CD S YH C+ + P
Sbjct: 307 PHCEEHGPDVLIVEEEPAKANMDYCRICKETSNILLCDTCPSS---YHAYCIDPPLTEIP 363
Query: 66 PGNWFCPECI 75
G W CP CI
Sbjct: 364 EGEWSCPRCI 373
>AF163019-1|AAD49324.1| 1312|Caenorhabditis elegans
trithorax-related protein LIN-59 protein.
Length = 1312
Score = 30.3 bits (65), Expect = 0.23
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 6/49 (12%)
Query: 13 YEPEEQ-SQYSPKRESEY--CYCGKFISESRMIGCDEPKCSFQWYHFQC 58
Y+P++ YS ++ C CG E M+ CD C F W H C
Sbjct: 950 YDPDDAWESYSTNKKGNAVRCICGALDEEGTMVQCD--TCHF-WLHVDC 995
>AF039718-1|AAB96746.1| 1312|Caenorhabditis elegans Abnormal cell
lineage protein 59 protein.
Length = 1312
Score = 30.3 bits (65), Expect = 0.23
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 6/49 (12%)
Query: 13 YEPEEQ-SQYSPKRESEY--CYCGKFISESRMIGCDEPKCSFQWYHFQC 58
Y+P++ YS ++ C CG E M+ CD C F W H C
Sbjct: 950 YDPDDAWESYSTNKKGNAVRCICGALDEEGTMVQCD--TCHF-WLHVDC 995
>U55854-4|AAK68160.1| 280|Caenorhabditis elegans Hypothetical
protein C04G6.2 protein.
Length = 280
Score = 29.9 bits (64), Expect = 0.30
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 37 SESRMIGCDEPKCSF--QWYHFQCVGIKVPPPGNW 69
++S + C+E CS Y+ C+G VP P NW
Sbjct: 159 TDSYTVSCEESACSACTPIYNTGCMGYGVPSPTNW 193
>Z82273-1|CAB54978.2| 565|Caenorhabditis elegans Hypothetical
protein F56F12.1 protein.
Length = 565
Score = 29.1 bits (62), Expect = 0.53
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 5 HVLPITEDYEPEEQSQYSPKRESE 28
HV P+ + +EP +SP++ESE
Sbjct: 298 HVAPVAKQFEPTNFPPFSPEKESE 321
>Z82263-7|CAJ76937.1| 565|Caenorhabditis elegans Hypothetical
protein F56F12.1 protein.
Length = 565
Score = 29.1 bits (62), Expect = 0.53
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 5 HVLPITEDYEPEEQSQYSPKRESE 28
HV P+ + +EP +SP++ESE
Sbjct: 298 HVAPVAKQFEPTNFPPFSPEKESE 321
>Z69385-3|CAA93426.2| 1477|Caenorhabditis elegans Hypothetical
protein ZK593.4 protein.
Length = 1477
Score = 28.7 bits (61), Expect = 0.70
Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Query: 14 EPEEQSQYSPKRESEYCYCGKFISESRMIGCDEPKCSFQWYHFQCVGI-KVPPPGNWFCP 72
E ++ P + C + E ++ CD C+ + + C + P G W CP
Sbjct: 307 EGDDDDDEDPMDQVFCVACNEGKDEDLLLLCDIDGCNNGRHTYCCDPVLDEVPEGEWRCP 366
Query: 73 ECIK 76
+CI+
Sbjct: 367 KCIE 370
>AF077536-2|AAK31410.2| 527|Caenorhabditis elegans Hypothetical
protein C16A11.4 protein.
Length = 527
Score = 28.3 bits (60), Expect = 0.93
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Query: 22 SPKRESEYCYCGKFISESRMIGCDEPKCSFQWYHFQCVGI 61
SP ++ C CG +++R+I C E C +W H C+ +
Sbjct: 28 SPHQKEVRCQCGTNNTDNRLIKCVE--CE-KWQHAICMSV 64
>U13646-6|AAC24421.2| 1376|Caenorhabditis elegans Flectin protein 1
protein.
Length = 1376
Score = 27.9 bits (59), Expect = 1.2
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
Query: 30 CYCGKFISESRMIGCDEPKCSFQWYHFQCVGIKVPPPGNWFCPECIKLRRKKRRRP 85
C K + M+ CD + F+ KVP G+WFC C R +K RP
Sbjct: 1089 CQICKSMDGDEMLVCDGCESGCHMECFRPRMTKVPE-GDWFCQRC---REEKSGRP 1140
>Z83317-2|CAB05899.1| 470|Caenorhabditis elegans Hypothetical
protein F13G11.1b protein.
Length = 470
Score = 25.8 bits (54), Expect = 5.0
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 11 EDYEPEEQSQYSPKRESEYCYCGK 34
E+Y P Q SPK + YC K
Sbjct: 24 ENYSPSSQDMDSPKPKGRILYCRK 47
>Z83317-1|CAB05898.1| 510|Caenorhabditis elegans Hypothetical
protein F13G11.1a protein.
Length = 510
Score = 25.8 bits (54), Expect = 5.0
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 11 EDYEPEEQSQYSPKRESEYCYCGK 34
E+Y P Q SPK + YC K
Sbjct: 64 ENYSPSSQDMDSPKPKGRILYCRK 87
>Z82263-4|CAB62794.1| 316|Caenorhabditis elegans Hypothetical
protein C47A4.3 protein.
Length = 316
Score = 25.8 bits (54), Expect = 5.0
Identities = 10/23 (43%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Query: 31 YCGKFISESRMIGCDEP-KCSFQ 52
YCG+F + + + CDE +CSF+
Sbjct: 272 YCGQFDNCAAFMSCDEKLQCSFE 294
>AL132859-4|CAB60492.1| 365|Caenorhabditis elegans Hypothetical
protein Y39C12A.8 protein.
Length = 365
Score = 25.8 bits (54), Expect = 5.0
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 11 EDYEPEEQSQYSPKRESEYCYCGKFISES 39
+ Y+ ++Q+QY+ +R EY K+ S S
Sbjct: 202 QSYQQQQQNQYARRRHEEYTDGFKYSSSS 230
>AL117204-13|CAB55128.1| 286|Caenorhabditis elegans Hypothetical
protein Y116A8C.22 protein.
Length = 286
Score = 25.8 bits (54), Expect = 5.0
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 5/69 (7%)
Query: 7 LPITEDYEPEEQSQYSPKRESEYCYCGKFISESRMIGCDEPKCSFQWYHFQCVGIKVPPP 66
L I ++ EPE +Q ++ C S++ C KC +W H +C GI+
Sbjct: 220 LKIAKNMEPEI-NQKKDTKQVHVCPICTLASKNGTCLCT--KCQ-KWVHLKCTGIRSKQW 275
Query: 67 GNWF-CPEC 74
+ F C C
Sbjct: 276 NSQFQCKNC 284
>AC024135-1|AAY86224.1| 300|Caenorhabditis elegans Hypothetical
protein C25A6.1 protein.
Length = 300
Score = 25.8 bits (54), Expect = 5.0
Identities = 10/23 (43%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Query: 31 YCGKFISESRMIGCDEP-KCSFQ 52
YCG+F + + + CDE +CSF+
Sbjct: 256 YCGQFDNCAAFMSCDEKLQCSFE 278
>AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical
protein H20J04.2 protein.
Length = 1427
Score = 25.8 bits (54), Expect = 5.0
Identities = 10/29 (34%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Query: 54 YHFQCVGIKV--PPPGNWFCPECIKLRRK 80
YH +C + V P +W C C +RK
Sbjct: 1137 YHLKCAKLDVNSDAPADWMCTSCRAQQRK 1165
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.324 0.141 0.505
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,170,971
Number of Sequences: 27539
Number of extensions: 131487
Number of successful extensions: 302
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 266
Number of HSP's gapped (non-prelim): 48
length of query: 98
length of database: 12,573,161
effective HSP length: 70
effective length of query: 28
effective length of database: 10,645,431
effective search space: 298072068
effective search space used: 298072068
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 52 (25.0 bits)
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