GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002368-TA|BGIBMGA002368-PA|IPR000215|Proteinase
inhibitor I4, serpin
         (119 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    19   9.8  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    19   9.8  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    19   9.8  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 19.4 bits (38), Expect = 9.8
 Identities = 7/19 (36%), Positives = 12/19 (63%)

Query: 36  LATSLGFSQDILANRNHHE 54
           L  +L +  ++L NR+ HE
Sbjct: 110 LNNNLQYIDEVLKNRDSHE 128


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 19.4 bits (38), Expect = 9.8
 Identities = 7/19 (36%), Positives = 12/19 (63%)

Query: 36  LATSLGFSQDILANRNHHE 54
           L  +L +  ++L NR+ HE
Sbjct: 110 LNNNLQYIDEVLKNRDSHE 128


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 19.4 bits (38), Expect = 9.8
 Identities = 10/32 (31%), Positives = 16/32 (50%)

Query: 24  TLLGSVGSTYDELATSLGFSQDILANRNHHEQ 55
           T+L    S  D    +L  S D+  ++ HH+Q
Sbjct: 289 TMLSIHPSKLDVEQMNLLHSNDLNMHQQHHQQ 320


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.313    0.129    0.348 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,777
Number of Sequences: 317
Number of extensions: 788
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 119
length of database: 114,650
effective HSP length: 50
effective length of query: 69
effective length of database: 98,800
effective search space:  6817200
effective search space used:  6817200
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.1 bits)
S2: 38 (19.4 bits)