Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002368-TA|BGIBMGA002368-PA|IPR000215|Proteinase
inhibitor I4, serpin
(119 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 49 9e-07
03_05_0294 + 22855503-22855946,22856346-22856399 48 3e-06
01_06_0824 - 32243495-32244319,32244449-32244859 46 1e-05
11_01_0771 + 6453130-6454488 37 0.005
11_02_0012 - 7346282-7347136,7347234-7347593 35 0.020
11_02_0011 - 7337618-7338496,7338596-7338991 33 0.046
04_04_0619 + 26652923-26653267,26653440-26654273 33 0.080
01_01_1152 + 9170628-9171899 29 1.3
11_02_0014 - 7352619-7352918,7353173-7353418 28 1.7
04_04_0620 + 26656072-26656417,26656585-26657396 27 4.0
07_03_0265 + 15976331-15976645,15977575-15977784,15977869-159779... 27 5.3
02_05_0471 - 29306334-29306398,29306579-29306775,29307744-29309665 26 7.0
02_03_0300 + 17454622-17455402,17455535-17456977,17457015-174573... 26 7.0
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 49.2 bits (112), Expect = 9e-07
Identities = 28/102 (27%), Positives = 46/102 (45%)
Query: 9 NIALSPTGIAGLLAMTLLGSVGSTYDELATSLGFSQDILANRNHHEQFGELLQQLNDNET 68
N+A SP + L++ G+ G+T D+LA++LG EQ +L+
Sbjct: 36 NVAFSPLSLHVALSLVAAGAGGATRDQLASALGGPGSAEGLHAFAEQLVQLVLADASGAG 95
Query: 69 NSKTLYADAMFVDSQTRIRSVFKDYLTTVYHGEARGVNFTQK 110
+ +AD +FVD+ ++ F D Y E V+F K
Sbjct: 96 GPRVAFADGVFVDASLSLKKTFGDVAVGKYKAETHSVDFQTK 137
>03_05_0294 + 22855503-22855946,22856346-22856399
Length = 165
Score = 47.6 bits (108), Expect = 3e-06
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 2/104 (1%)
Query: 9 NIALSPTGIAGLLAMTLLGSVGSTYDELATSLGFSQDILANRNHH--EQFGELLQQLNDN 66
N+A SP + L++ G+ G+T D+L + LG A H EQ +L+ +
Sbjct: 45 NVAFSPLSLHVALSLVAAGAGGATRDQLVSLLGVPGRGTAEGLHAFAEQVVQLVLADSSP 104
Query: 67 ETNSKTLYADAMFVDSQTRIRSVFKDYLTTVYHGEARGVNFTQK 110
+ +AD +F+DS + FKD Y E V+F K
Sbjct: 105 AGGPRVAFADGVFIDSSLSLMKSFKDVAVGKYKAETHSVDFQTK 148
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 45.6 bits (103), Expect = 1e-05
Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 4/117 (3%)
Query: 7 NENIALSPTGIAGLLAMTLLGSVGSTYDELATSLG-FSQDILANRNHHEQFGELLQQLN- 64
++N+A+SP + LA+ G+ G T D++ LG A H L
Sbjct: 31 DKNLAVSPLSLHAALALLGAGARGETLDQIIAFLGPAGGPAHAALASHVALCSLADDSGP 90
Query: 65 -DNETNSKTLYADAMFVDSQTRIRSVFKDYLTTVYHGEARGVNFTQK-NEVKQMINE 119
D+ K +A+ ++VD+ R+++ + + Y EAR V+F K E ++ INE
Sbjct: 91 GDDRGGPKVRFANGVWVDAALRLKAAYARVVADKYRAEARPVSFRDKLEEARREINE 147
>11_01_0771 + 6453130-6454488
Length = 452
Score = 36.7 bits (81), Expect = 0.005
Identities = 25/103 (24%), Positives = 45/103 (43%), Gaps = 2/103 (1%)
Query: 9 NIALSPTGIAGLLAMTLLGSVGSTYDELATSLG-FSQDILANRNHHEQFGELLQQLNDNE 67
N+A SP + L++ G+ G T DE+ LG S+D LA L +
Sbjct: 38 NLAFSPLSVHAALSLAAAGAAGGTLDEILAVLGAASRDDLAAFVGRTAETALADR-GPES 96
Query: 68 TNSKTLYADAMFVDSQTRIRSVFKDYLTTVYHGEARGVNFTQK 110
+ ++A ++ D+ + ++ + Y+ EA V+F K
Sbjct: 97 LGPRVVFAPGVWCDAARPFKPAYRAAVAAEYNAEATVVDFKNK 139
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 34.7 bits (76), Expect = 0.020
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 5 NKNENIALSPTGIAGLLAMTLLGSVGSTYDELATSLG 41
N N N+ SP + LA+ G+ G+T DEL LG
Sbjct: 28 NSNRNVVFSPVSLYAALALVASGARGTTLDELVALLG 64
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 33.5 bits (73), Expect = 0.046
Identities = 29/120 (24%), Positives = 49/120 (40%), Gaps = 10/120 (8%)
Query: 5 NKNENIALSPTGIAGLLAMTLLGSVGSTYDELATSLGFS--QDILANRNHHEQFGELLQQ 62
+ N+N+ SP + LA+ G+ G+T DEL LG + D+ + + G
Sbjct: 28 SSNKNLVFSPASLYAALALVAAGARGTTLDELLALLGAASLDDLEESVRRAVEVG----- 82
Query: 63 LNDNETNSKTLYADAMFV--DSQTRIRSVFKDYLTTVYHGEARGVNF-TQKNEVKQMINE 119
L D + +DA V D ++ ++ Y R NF Q ++ IN+
Sbjct: 83 LADESASGGPRVSDACGVWHDETLELKPAYRAAAAGTYKAVTRAANFQRQPKRSRKKINK 142
>04_04_0619 + 26652923-26653267,26653440-26654273
Length = 392
Score = 32.7 bits (71), Expect = 0.080
Identities = 30/114 (26%), Positives = 45/114 (39%), Gaps = 8/114 (7%)
Query: 6 KNENIALSPTGIAGLLAMTLLGSVGSTYDELATSLGFSQDILANRNHHEQFGELLQQLND 65
+ N SP G+ LA+ G+ G T +L LG SQ I H+ L +
Sbjct: 18 EQSNFMFSPLGLRAGLALLATGTDGETLRQLLAFLG-SQHI------HQLNAASAGLLAE 70
Query: 66 NETNSKTLYADAMFVDSQTRIRSVFKDYLTTVYHGEARGVNF-TQKNEVKQMIN 118
+ +A +FVD R+R F+ + R V+F Q N +N
Sbjct: 71 MRAWPQLSFAAGIFVDRSLRLRPEFQSTAAAAHGAFPRSVDFQNQANAAAAEVN 124
>01_01_1152 + 9170628-9171899
Length = 423
Score = 28.7 bits (61), Expect = 1.3
Identities = 28/114 (24%), Positives = 44/114 (38%), Gaps = 7/114 (6%)
Query: 6 KNENIALSPTGIAGLLAMTLLGSVGSTYDELATSLGFSQDILANRNHHEQFGELLQQLND 65
+ N +SP LA+ G+ G T EL LGF H L+ +L
Sbjct: 57 QGRNFIVSPLSFHAALALVADGARGETQREL---LGFLGSPSLAELHRSPTTRLVARLRH 113
Query: 66 NETNSKTLYADAMFVDSQTRIRSVFKDYLTTVYHGEARGVNF-TQKNEVKQMIN 118
S +A ++VD + F D + Y A +F TQ + ++ +N
Sbjct: 114 LPNTS---FACGVWVDRGRALTPEFADAAASRYAAVAEPADFATQPEQARERVN 164
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 28.3 bits (60), Expect = 1.7
Identities = 14/39 (35%), Positives = 18/39 (46%)
Query: 5 NKNENIALSPTGIAGLLAMTLLGSVGSTYDELATSLGFS 43
N N N+ S + LA+ G G+T EL LG S
Sbjct: 30 NNNRNLVFSLVSLYAALALVAAGGQGTTLHELLALLGAS 68
>04_04_0620 + 26656072-26656417,26656585-26657396
Length = 385
Score = 27.1 bits (57), Expect = 4.0
Identities = 23/95 (24%), Positives = 39/95 (41%), Gaps = 7/95 (7%)
Query: 6 KNENIALSPTGIAGLLAMTLLGSVGSTYDELATSLGFSQDILANRNHHEQFGELLQQLND 65
+ N SP + LA+ G+ G T ++ LG S+ I H+ L +
Sbjct: 18 EQSNFIFSPMCLRAGLALLATGADGETLRQMLAFLG-SEHI------HQLNATSAGLLAE 70
Query: 66 NETNSKTLYADAMFVDSQTRIRSVFKDYLTTVYHG 100
+ + ++A +FVD R+R FK + G
Sbjct: 71 MQAWPQLVFAAGIFVDRSLRLRPEFKSTAAAAHGG 105
>07_03_0265 +
15976331-15976645,15977575-15977784,15977869-15977916,
15978307-15978675,15978736-15978747,15978763-15978870,
15979156-15979493,15980313-15980430,15983247-15984107,
15984457-15984750
Length = 890
Score = 26.6 bits (56), Expect = 5.3
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 46 ILANRNHHEQFGELLQQLNDNETNSKTL 73
IL ++N+H+ FG + +L+ NS T+
Sbjct: 612 ILGSKNYHDVFGRWMHKLSMKSPNSVTI 639
>02_05_0471 - 29306334-29306398,29306579-29306775,29307744-29309665
Length = 727
Score = 26.2 bits (55), Expect = 7.0
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 30 GSTYDELATSLGFSQDILANRNHHEQFGELLQQLNDNETNS 70
G++ +E+AT L I N HEQ +LLQ+ NS
Sbjct: 494 GTSLEEIATGLTDVSAIYETMNEHEQALKLLQKALKMYNNS 534
>02_03_0300 +
17454622-17455402,17455535-17456977,17457015-17457317,
17458429-17458519,17458623-17459757,17459998-17460077,
17460449-17460533,17460614-17460705,17461079-17461147,
17461227-17461263,17461351-17461433,17461695-17461840,
17461868-17462138,17462245-17462281,17462428-17462721
Length = 1648
Score = 26.2 bits (55), Expect = 7.0
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Query: 50 RNHHEQFGELLQQLNDNETNSKTLYADAMFVDS 82
R+HHE+ +LL Q ET T Y DA + S
Sbjct: 138 RDHHEENVDLLSQTRVEET--PTCYGDAQLLTS 168
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.313 0.129 0.348
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,840,299
Number of Sequences: 37544
Number of extensions: 93834
Number of successful extensions: 198
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 185
Number of HSP's gapped (non-prelim): 13
length of query: 119
length of database: 14,793,348
effective HSP length: 73
effective length of query: 46
effective length of database: 12,052,636
effective search space: 554421256
effective search space used: 554421256
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 54 (25.8 bits)
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