GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002368-TA|BGIBMGA002368-PA|IPR000215|Proteinase
inhibitor I4, serpin
         (119 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex det...    20   8.8  

>AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex
          determiner protein.
          Length = 385

 Score = 19.8 bits (39), Expect = 8.8
 Identities = 8/29 (27%), Positives = 18/29 (62%)

Query: 44 QDILANRNHHEQFGELLQQLNDNETNSKT 72
          ++I +  +H E+F +L  + N+ +  S+T
Sbjct: 3  RNISSYSHHDEKFKQLRNEDNEIDLRSRT 31


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.313    0.129    0.348 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,814
Number of Sequences: 429
Number of extensions: 971
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1
length of query: 119
length of database: 140,377
effective HSP length: 51
effective length of query: 68
effective length of database: 118,498
effective search space:  8057864
effective search space used:  8057864
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.6 bits)
S2: 39 (19.8 bits)