GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002367-TA|BGIBMGA002367-PA|undefined
         (195 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI000023D6C2 Cluster: hypothetical protein FG02611.1; ...    41   0.017
UniRef50_Q8E8W1 Cluster: Putative uncharacterized protein; n=1; ...    33   4.5  
UniRef50_Q0S5P2 Cluster: Putative uncharacterized protein; n=1; ...    33   5.9  
UniRef50_UPI00015B5209 Cluster: PREDICTED: similar to tubulin-sp...    32   7.8  
UniRef50_Q5P3F4 Cluster: 4-hydroxybenzoyl-CoA reductase, beta su...    32   7.8  
UniRef50_O13801 Cluster: RNA-binding protein; n=1; Schizosacchar...    32   7.8  

>UniRef50_UPI000023D6C2 Cluster: hypothetical protein FG02611.1;
           n=1; Gibberella zeae PH-1|Rep: hypothetical protein
           FG02611.1 - Gibberella zeae PH-1
          Length = 903

 Score = 41.1 bits (92), Expect = 0.017
 Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 1/74 (1%)

Query: 89  SWSYGTQLHCLITPLQFIAAHD-RIINAWGHTSPAWQLCITWTTHDTHAAFKLSLDSPQT 147
           S+ Y T  H  + P   +++ D R IN   HT P   L I+WT+  T +   LS  +  T
Sbjct: 73  SYMYRTNQHLTVQPPTSVSSCDARTINYITHTLPQSCLTISWTSSTTTSTPSLSNSTSDT 132

Query: 148 SSSTGDNHAAFSSV 161
           SS    ++A  SSV
Sbjct: 133 SSDPAQSNAPSSSV 146


>UniRef50_Q8E8W1 Cluster: Putative uncharacterized protein; n=1;
           Shewanella oneidensis|Rep: Putative uncharacterized
           protein - Shewanella oneidensis
          Length = 308

 Score = 33.1 bits (72), Expect = 4.5
 Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 1/65 (1%)

Query: 81  PSQPTHRASWSYGTQLHCLITPLQFIAAHDRIINAWGHTSPAWQLCITWTTHDTHAAFKL 140
           P   TH+  + +GT       P Q  A  D+II A G+TS  WQ  I      +  A+  
Sbjct: 237 PDPSTHKLYFDHGTATLDAWYP-QLQAKADKIIEAKGYTSQNWQSLIFEGAEHSEHAWAA 295

Query: 141 SLDSP 145
            LD P
Sbjct: 296 RLDIP 300


>UniRef50_Q0S5P2 Cluster: Putative uncharacterized protein; n=1;
          Rhodococcus sp. RHA1|Rep: Putative uncharacterized
          protein - Rhodococcus sp. (strain RHA1)
          Length = 126

 Score = 32.7 bits (71), Expect = 5.9
 Identities = 15/34 (44%), Positives = 19/34 (55%)

Query: 58 PRILADKSTSLTVVPQQASIAAGPSQPTHRASWS 91
          PR+  D+ST   VVP+  S A   S   HR+ WS
Sbjct: 9  PRVDGDQSTPTAVVPEVRSAAETASVAAHRSRWS 42


>UniRef50_UPI00015B5209 Cluster: PREDICTED: similar to
           tubulin-specific chaperone d; n=1; Nasonia
           vitripennis|Rep: PREDICTED: similar to tubulin-specific
           chaperone d - Nasonia vitripennis
          Length = 1099

 Score = 32.3 bits (70), Expect = 7.8
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%)

Query: 111 RIINAWGHTSPAWQLCITWTTHDTHAAFKLSLDSPQTSSSTGDNHAAFSSVSNH 164
           RI++A  HT+   +   TW   + HA     LD+ Q++S T  N   F+    H
Sbjct: 643 RIVSAEAHTAFFTEYYFTWNQENRHAIINRYLDNLQSTSQT--NRIGFAQAIGH 694


>UniRef50_Q5P3F4 Cluster: 4-hydroxybenzoyl-CoA reductase, beta
           subunit; n=1; Azoarcus sp. EbN1|Rep:
           4-hydroxybenzoyl-CoA reductase, beta subunit - Azoarcus
           sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
          Length = 329

 Score = 32.3 bits (70), Expect = 7.8
 Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 1/45 (2%)

Query: 61  LADKSTSLTVVPQQASIAAGPSQPTHRASWSYGTQLHCLITPLQF 105
           LA  +T  T +P  A  AA  + PTHRAS + G  L CL T  Q+
Sbjct: 81  LAADATVRTQLPALAQAAAAVAGPTHRASATLGGNL-CLETRCQY 124


>UniRef50_O13801 Cluster: RNA-binding protein; n=1;
           Schizosaccharomyces pombe|Rep: RNA-binding protein -
           Schizosaccharomyces pombe (Fission yeast)
          Length = 604

 Score = 32.3 bits (70), Expect = 7.8
 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 2/67 (2%)

Query: 96  LHCLITPLQFIAAHDRIINAWGHTSPAWQLCI-TW-TTHDTHAAFKLSLDSPQTSSSTGD 153
           ++C      F A   +I++  G T+   QL + +W T H  H     +L +P+   STG 
Sbjct: 229 INCQADARSFYAERSKIVHVAGLTNDVTQLELESWFTNHGVHPVALWTLKTPEPYKSTGT 288

Query: 154 NHAAFSS 160
               F+S
Sbjct: 289 GFVLFAS 295


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.321    0.129    0.415 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,872,997
Number of Sequences: 1657284
Number of extensions: 8089368
Number of successful extensions: 15613
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 15611
Number of HSP's gapped (non-prelim): 6
length of query: 195
length of database: 575,637,011
effective HSP length: 97
effective length of query: 98
effective length of database: 414,880,463
effective search space: 40658285374
effective search space used: 40658285374
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 70 (32.3 bits)