Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002366-TA|BGIBMGA002366-PA|undefined
(328 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00006CA67C Cluster: hypothetical protein TTHERM_0064... 42 0.022
UniRef50_Q6FVJ4 Cluster: Candida glabrata strain CBS138 chromoso... 37 0.62
UniRef50_P08544 Cluster: Genome polyprotein [Contains: Capsid pr... 36 1.1
UniRef50_A2AW96 Cluster: Novel protein containing SEA domains; n... 35 3.3
UniRef50_Q2JEB8 Cluster: Acyl transferase region; n=1; Frankia s... 34 4.4
UniRef50_Q3ITQ1 Cluster: Putative uncharacterized protein; n=1; ... 34 4.4
UniRef50_A7PZS7 Cluster: Chromosome chr15 scaffold_40, whole gen... 34 5.8
UniRef50_Q5C342 Cluster: SJCHGC04680 protein; n=1; Schistosoma j... 33 7.7
UniRef50_Q4PEF6 Cluster: Putative uncharacterized protein; n=1; ... 33 7.7
>UniRef50_UPI00006CA67C Cluster: hypothetical protein
TTHERM_00647160; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00647160 - Tetrahymena
thermophila SB210
Length = 1040
Score = 41.9 bits (94), Expect = 0.022
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Query: 216 WNIGNYANIRIESQNVGSEKFLTPNQQSSCTASFAFPMTPGGVIEANVYVDHTSNLDHVI 275
WN+G NI ++ +N + F P+ Q C P+ + + V H +N+ VI
Sbjct: 112 WNVGEQFNIYVDGKNAATWTFTQPSNQDFCGMKGTLPIQQDTQVNLSFSVPHITNIVEVI 171
Query: 276 ILVKNLVSNGVDTVAGFQIFEPSRASFVTG 305
I ++ NG G Q F S ++ V+G
Sbjct: 172 I-DTTMIGNG---QWGLQSFVMSSSTCVSG 197
>UniRef50_Q6FVJ4 Cluster: Candida glabrata strain CBS138 chromosome
E complete sequence; n=1; Candida glabrata|Rep: Candida
glabrata strain CBS138 chromosome E complete sequence -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 519
Score = 37.1 bits (82), Expect = 0.62
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 46 VKSTHFVEPNDRTSCFTSPKIQMENGGRLEINVFVDSVVGRDI-SLSVVVSE-NVPNGVD 103
+K T F+E +D +C+ + Q E G L N ++ + D+ + + +++ N G +
Sbjct: 353 IKYTEFIEKSDDDNCYVTFMPQGEPGILLGDNFLRNAYIVYDLEDMEISIAQANFNGGAE 412
Query: 104 SIVA-VSNLPQST-TPGWHVLSANIVGSVAFEGYVNFIGHRSTGS 146
+I A V N+P + PG+ S A G + F G+ ST S
Sbjct: 413 NIEAIVKNVPSAVKAPGYSASFTEFPSSYATTGNI-FSGYNSTNS 456
>UniRef50_P08544 Cluster: Genome polyprotein [Contains: Capsid
protein VP4 (P1A) (Virion protein 4); Capsid protein VP2
(P1B) (Virion protein 2); Capsid protein VP3 (P1C)
(Virion protein 3); Capsid protein VP1 (P1D) (Virion
protein 1); Picornain 2A (EC 3.4.22.29) (Core protein
P2A); Core protein P2B; Core protein P2C; Core protein
P3A; Genome-linked protein VPg (P3B); Picornain 3C (EC
3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA
polymerase (EC 2.7.7.48) (P3D)]; n=32; Cardiovirus|Rep:
Genome polyprotein [Contains: Capsid protein VP4 (P1A)
(Virion protein 4); Capsid protein VP2 (P1B) (Virion
protein 2); Capsid protein VP3 (P1C) (Virion protein 3);
Capsid protein VP1 (P1D) (Virion protein 1); Picornain
2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B;
Core protein P2C; Core protein P3A; Genome-linked
protein VPg (P3B); Picornain 3C (EC 3.4.22.28) (Protease
3C) (P3C); RNA-directed RNA polymerase (EC 2.7.7.48)
(P3D)] - Theiler's murine encephalomyelitis virus
(strain BeAn 8386) (TMEV)
Length = 2303
Score = 36.3 bits (80), Expect = 1.1
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 21 DSAMCSPFPIWNLGTYSSIEVETPHVKSTHFVEPNDRTSCFTSPKIQMENG 71
D AM S + IW+LG SS P + TH+ R + +TSP I +G
Sbjct: 555 DQAMQSTYAIWDLGLNSSFNFTAPFISPTHY-----RQTSYTSPTITSVDG 600
>UniRef50_A2AW96 Cluster: Novel protein containing SEA domains;
n=12; Eumetazoa|Rep: Novel protein containing SEA
domains - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 1044
Score = 34.7 bits (76), Expect = 3.3
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 1/129 (0%)
Query: 20 NDSAMCSPFPIWNLGTYSSIEVETPHVKSTHFVEPNDRTSCFTSPKIQMENGGRLEINVF 79
N ++ +P + + T S++ ET +T P++ TS T + E +
Sbjct: 77 NATSETTPSNVTSETTPSNVTSETTPSNATSETTPSNVTSETTPSNVTSEIKPSNVTSEI 136
Query: 80 VDSVVGRDISLSVVVSENVPNGVDSIVAVSNLPQSTTPGWHVLSANIVGSVAFEGYVNFI 139
S V + + S V SE P+ V S SN+ TTP +V S +VA E + +
Sbjct: 137 KPSNVTSETTPSNVTSETTPSNVTSETTPSNVTLETTPS-NVTSETTPSNVASETTPSNV 195
Query: 140 GHRSTGSHI 148
+T S++
Sbjct: 196 TSETTPSNV 204
>UniRef50_Q2JEB8 Cluster: Acyl transferase region; n=1; Frankia sp.
CcI3|Rep: Acyl transferase region - Frankia sp. (strain
CcI3)
Length = 1076
Score = 34.3 bits (75), Expect = 4.4
Identities = 19/84 (22%), Positives = 39/84 (46%)
Query: 10 TFESGIGLYGNDSAMCSPFPIWNLGTYSSIEVETPHVKSTHFVEPNDRTSCFTSPKIQME 69
T E GI + S +C P + + +E++ V++ P+ + F +P+ +
Sbjct: 713 TVEDGIRVICRRSRLCVPIAEARVAAMAVVELDAATVQAEIDHLPDVAVAFFAAPRSTVI 772
Query: 70 NGGRLEINVFVDSVVGRDISLSVV 93
G R+E+ V+S RD+ ++
Sbjct: 773 GGTRVEVERLVESWTSRDVPAHMI 796
>UniRef50_Q3ITQ1 Cluster: Putative uncharacterized protein; n=1;
Natronomonas pharaonis DSM 2160|Rep: Putative
uncharacterized protein - Natronomonas pharaonis (strain
DSM 2160 / ATCC 35678)
Length = 514
Score = 34.3 bits (75), Expect = 4.4
Identities = 27/92 (29%), Positives = 37/92 (40%), Gaps = 8/92 (8%)
Query: 77 NVFVDSVVGRDISLSVVVSENVPNGVDSIVAVSNLPQST----TPGWHV--LSANIVGSV 130
NV D VG D L+V + + P V +VAVS P P W+V + +
Sbjct: 262 NVTSDLRVGEDGELNVTIENDGPRAVGGVVAVSETPNPNVAVRNPEWYVGPMEPGEASTA 321
Query: 131 AFEGYVNFIGHRSTGSHILIDAIRYIPPHVDV 162
AF V G +L +RY P D+
Sbjct: 322 AFR--VGLREDAEPGDRVLPLVVRYRTPAGDI 351
>UniRef50_A7PZS7 Cluster: Chromosome chr15 scaffold_40, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr15 scaffold_40, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 403
Score = 33.9 bits (74), Expect = 5.8
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 63 SPKIQMENGGRLEINVFVDSVVGRDISLSVVVSENV--PNGVDSIVAVSNLPQSTTPGWH 120
+P++Q L + + +D +D+ L+V + V P V+ I S + +ST PG +
Sbjct: 243 TPELQFVCRRNLLLTINIDKNTEKDLQLAVEAAAEVLAPEKVEVIDFTSQVDKSTDPGHY 302
Query: 121 VLSANIVGSVAFE 133
V+ I G V+ E
Sbjct: 303 VIFWEISGEVSVE 315
>UniRef50_Q5C342 Cluster: SJCHGC04680 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC04680 protein - Schistosoma
japonicum (Blood fluke)
Length = 238
Score = 33.5 bits (73), Expect = 7.7
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 218 IGNYANIRIESQNVGSEKFLTPNQQSSCTASFAFPMTPGGVIEANVYVDHT 268
+G Y + + N+ +E+ TPN +S+CT SF +EA +++T
Sbjct: 122 VGVYHKVHLFDANLNAEEITTPNIKSTCTQSFCESKVTRSGMEAPNVIENT 172
>UniRef50_Q4PEF6 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 1126
Score = 33.5 bits (73), Expect = 7.7
Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 10/94 (10%)
Query: 35 TYSSIEVETPHVKSTHFVEPNDRTSCFTSPKIQMENGGRLEINVFVDSVVGRDISL---- 90
T S I+ T + +HF DR T P Q+ L + +D + R SL
Sbjct: 587 TLSPIDTSTFAAEQSHFANSMDRARSHTPPTRQLSVASHLATS--IDDIAPRSSSLEDEQ 644
Query: 91 ----SVVVSENVPNGVDSIVAVSNLPQSTTPGWH 120
+ E+ P G S VA ++ P++++P H
Sbjct: 645 ALGSTPAEGESTPMGKASAVASTSQPRNSSPSTH 678
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.319 0.136 0.414
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 362,611,742
Number of Sequences: 1657284
Number of extensions: 14567945
Number of successful extensions: 30074
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 30067
Number of HSP's gapped (non-prelim): 19
length of query: 328
length of database: 575,637,011
effective HSP length: 101
effective length of query: 227
effective length of database: 408,251,327
effective search space: 92673051229
effective search space used: 92673051229
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 73 (33.5 bits)
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