GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002366-TA|BGIBMGA002366-PA|undefined
         (328 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    23   3.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   4.1  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   9.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.4  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 5/63 (7%)

Query: 222 ANIRIESQNVGSEKFLTPNQQSSCTASFAFPMTPGGVIEANVYVDHTSNLDHVIILVKNL 281
           +NI ++SQ      F T  QQS    S      P G    +V+V  T +L H     K  
Sbjct: 433 SNIEVQSQGSSKNTFNTFWQQSDVDLSRGMDFQPRG----SVFVRFT-HLQHQPFTYKIT 487

Query: 282 VSN 284
           V+N
Sbjct: 488 VNN 490


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/17 (52%), Positives = 14/17 (82%)

Query: 274  VIILVKNLVSNGVDTVA 290
            +II+V + V+ G+DTVA
Sbjct: 1358 IIIIVMSSVTYGIDTVA 1374


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 1/36 (2%)

Query: 188 EECITFNFEENTEKLFDDNNYLCDGFVPWNIGNYAN 223
           E  + F F+ N    F D+N       P   GNYAN
Sbjct: 79  EGSVDFLFD-NFSAAFQDHNIEITEVAPVLPGNYAN 113


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 1/36 (2%)

Query: 188 EECITFNFEENTEKLFDDNNYLCDGFVPWNIGNYAN 223
           E  + F F+ N    F D+N       P   GNYAN
Sbjct: 312 EGSVDFLFD-NFSAAFQDHNIEITEVAPVLPGNYAN 346


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 1/36 (2%)

Query: 188 EECITFNFEENTEKLFDDNNYLCDGFVPWNIGNYAN 223
           E  + F F+ N    F D+N       P   GNYAN
Sbjct: 312 EGSVDFLFD-NFSAAFQDHNIEITEVAPVLPGNYAN 346


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.136    0.414 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,417
Number of Sequences: 317
Number of extensions: 3344
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 5
length of query: 328
length of database: 114,650
effective HSP length: 57
effective length of query: 271
effective length of database: 96,581
effective search space: 26173451
effective search space used: 26173451
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 43 (21.4 bits)