GeneModel BLAST Result against nematostella

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002364-TA|BGIBMGA002364-PA|IPR009020|Proteinase
inhibitor, propeptide
         (88 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_3051| Best HMM Match : No HMM Matches (HMM E-Value=.)               33   0.033
SB_40833| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.099
SB_19021| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.099
SB_30225| Best HMM Match : Peptidase_S8 (HMM E-Value=0.0034)           31   0.17 
SB_9343| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   0.53 
SB_58044| Best HMM Match : Vitellogenin_N (HMM E-Value=0.022)          28   1.2  
SB_42816| Best HMM Match : ATP-synt_8 (HMM E-Value=9.7)                27   2.1  
SB_45624| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   3.7  
SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   4.9  
SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14)                    25   6.5  
SB_2804| Best HMM Match : No HMM Matches (HMM E-Value=.)               25   6.5  
SB_47835| Best HMM Match : No HMM Matches (HMM E-Value=.)              25   6.5  
SB_37109| Best HMM Match : PBP_dimer (HMM E-Value=3.1)                 25   6.5  
SB_26576| Best HMM Match : LMWPc (HMM E-Value=5.60519e-45)             25   6.5  

>SB_3051| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 244

 Score = 33.1 bits (72), Expect = 0.033
 Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)

Query: 22 DTVYHNHFAVHVPSG-PEHVDDIVRRHGYVNHGQ 54
          D  + N +AVH+ +  P+ V+ I  RHG+VN GQ
Sbjct: 31 DVRFANSWAVHLDNADPDSVEKIATRHGFVNLGQ 64


>SB_40833| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1300

 Score = 31.5 bits (68), Expect = 0.099
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 20  ARDTVYHNHFAVHVPSGPEHVDDIVRRHGYVNHG 53
           +R  ++ N +AV +  G    D I + HGY+N G
Sbjct: 73  SRKKLFSNTWAVQIEGGKTQADRIAKSHGYINLG 106


>SB_19021| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 590

 Score = 31.5 bits (68), Expect = 0.099
 Identities = 11/38 (28%), Positives = 21/38 (55%)

Query: 20 ARDTVYHNHFAVHVPSGPEHVDDIVRRHGYVNHGQRSG 57
          A   +Y N + ++   G E+VD++  +HG+ +H    G
Sbjct: 23 ASKPLYTNTWVIYTDKGQEYVDNLAAKHGFKSHRDGGG 60


>SB_30225| Best HMM Match : Peptidase_S8 (HMM E-Value=0.0034)
          Length = 605

 Score = 30.7 bits (66), Expect = 0.17
 Identities = 11/30 (36%), Positives = 18/30 (60%)

Query: 20 ARDTVYHNHFAVHVPSGPEHVDDIVRRHGY 49
          A + VY N +A+HV  G E   ++ + HG+
Sbjct: 36 AEERVYTNGWAIHVNGGIEEAKEVAKAHGF 65


>SB_9343| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 786

 Score = 29.1 bits (62), Expect = 0.53
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 16  MCQGARDTVYHNHFAVHVPSGPEHVDDIVRRHGYVNHGQRSGR 58
           MCQ + D ++H   A+  P   E +  + R+ G   HG + GR
Sbjct: 202 MCQ-SMDKLFHQKIAMMPPEEKEIIIGVKRKPGEGGHGGKKGR 243


>SB_58044| Best HMM Match : Vitellogenin_N (HMM E-Value=0.022)
          Length = 1671

 Score = 27.9 bits (59), Expect = 1.2
 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 3/36 (8%)

Query: 24  VYHNHFAVHVPSGPEHVDDIVRRH--GYVNHGQRSG 57
           +Y N   VH P  PEH +  +RRH   + N G  SG
Sbjct: 419 IYQNKTNVHHPDSPEH-EHCLRRHIWAFGNLGHLSG 453


>SB_42816| Best HMM Match : ATP-synt_8 (HMM E-Value=9.7)
          Length = 261

 Score = 27.1 bits (57), Expect = 2.1
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%)

Query: 40 VDDIVRRHGYVNHGQRSGRVRLVTDKFDTPKYAIHCL 76
          +D  VRR+  +  G+R  R+ ++TDK  TPK A+  L
Sbjct: 55 LDVKVRRYEDIRKGKRRRRLPMITDK--TPKSALASL 89


>SB_45624| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 236

 Score = 26.2 bits (55), Expect = 3.7
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 22  DTVYHNHFAVHVPSGPEHVDDIVRRHGYV-NHGQRSGRV 59
           DT   N +   +     +VDDI RR+GYV N  +R+G V
Sbjct: 159 DTNKRNGYVDDIDRRNGYVDDIDRRNGYVDNIVKRNGYV 197



 Score = 25.8 bits (54), Expect = 4.9
 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 22  DTVYHNHFAVHVPSGPEHVDDIVRRHGYVNH-GQRSGRV 59
           DT   N +  +      +VDDI RR+GYV+   +R+G V
Sbjct: 75  DTDKRNGYVDNTDKRNGYVDDIDRRNGYVDDIDKRNGYV 113


>SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 6489

 Score = 25.8 bits (54), Expect = 4.9
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 27  NHFAVHVPSGPEHVDDIVRRHGY-VNHGQRSGRVRLVTDK 65
           NHF V V   PE  + ++  H   +NH ++ G V    +K
Sbjct: 681 NHFTVKVQLSPETRNKLINNHWKPLNHQKKVGNVNFRGNK 720


>SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14)
          Length = 553

 Score = 25.4 bits (53), Expect = 6.5
 Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 1/33 (3%)

Query: 32  HVPSGPEHVDDIVRRHGYVNHGQRS-GRVRLVT 63
           HV SG    D+    HG V HG R  GR R +T
Sbjct: 235 HVLSGEHQEDEEKGDHGVVFHGARQHGRGRGIT 267


>SB_2804| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 216

 Score = 25.4 bits (53), Expect = 6.5
 Identities = 8/16 (50%), Positives = 12/16 (75%)

Query: 37 PEHVDDIVRRHGYVNH 52
          PE +D +V  HG+V+H
Sbjct: 79 PEDIDHVVSTHGHVDH 94


>SB_47835| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 106

 Score = 25.4 bits (53), Expect = 6.5
 Identities = 9/15 (60%), Positives = 11/15 (73%)

Query: 26 HNHFAVHVPSGPEHV 40
          H H + HVPS P+HV
Sbjct: 44 HVHMSDHVPSKPDHV 58


>SB_37109| Best HMM Match : PBP_dimer (HMM E-Value=3.1)
          Length = 459

 Score = 25.4 bits (53), Expect = 6.5
 Identities = 9/20 (45%), Positives = 14/20 (70%)

Query: 15 HMCQGARDTVYHNHFAVHVP 34
          H+C+   DT+  ++FA HVP
Sbjct: 71 HVCRRHWDTLRRSNFAAHVP 90


>SB_26576| Best HMM Match : LMWPc (HMM E-Value=5.60519e-45)
          Length = 620

 Score = 25.4 bits (53), Expect = 6.5
 Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%)

Query: 22  DTVYHNHFAVHVPSGPEHVDDIVR 45
           DT  H HFAV+V S  E V D+++
Sbjct: 242 DTTRHTHFAVNVASSSE-VKDLLQ 264


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.329    0.140    0.477 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,043,867
Number of Sequences: 59808
Number of extensions: 110302
Number of successful extensions: 227
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 209
Number of HSP's gapped (non-prelim): 21
length of query: 88
length of database: 16,821,457
effective HSP length: 65
effective length of query: 23
effective length of database: 12,933,937
effective search space: 297480551
effective search space used: 297480551
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 52 (25.0 bits)