GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002364-TA|BGIBMGA002364-PA|IPR009020|Proteinase
inhibitor, propeptide
         (88 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              20   4.0  
S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating...    19   9.1  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 20.2 bits (40), Expect = 4.0
 Identities = 8/24 (33%), Positives = 13/24 (54%)

Query: 33  VPSGPEHVDDIVRRHGYVNHGQRS 56
           +PSG  H+ D+    GY  +  R+
Sbjct: 160 LPSGELHIRDVGPEDGYKTYQCRT 183


>S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating
          peptide protein.
          Length = 50

 Score = 19.0 bits (37), Expect = 9.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)

Query: 59 VRLVTDKFDTPKYAIHC 75
          V L+T  F TP  +I C
Sbjct: 14 VILITSYFVTPTMSIKC 30


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.329    0.140    0.477 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,643
Number of Sequences: 429
Number of extensions: 809
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 88
length of database: 140,377
effective HSP length: 48
effective length of query: 40
effective length of database: 119,785
effective search space:  4791400
effective search space used:  4791400
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (20.4 bits)
S2: 37 (19.0 bits)