Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002360-TA|BGIBMGA002360-PA|IPR001680|WD-40 repeat,
IPR011046|WD40-like
(113 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 43 1e-05
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 42 2e-05
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 41 5e-05
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 38 5e-04
SPAC806.02c |||Par A family ATPase iron cluster assembly protein... 37 9e-04
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 36 0.001
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 36 0.002
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 34 0.006
SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyce... 33 0.008
SPBC3H7.01 |spo14|stl1, SPBP16F5.01c|WD repeat protein Spo14|Sch... 33 0.011
SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces p... 33 0.014
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 33 0.014
SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Sc... 32 0.025
SPAC25H1.08c |||ribosome biogenesis protein Sqt1|Schizosaccharom... 32 0.025
SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces pom... 31 0.033
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 31 0.044
SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar... 31 0.044
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 31 0.044
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 30 0.077
SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor Raf1|S... 30 0.077
SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces pomb... 29 0.18
SPCC126.01c ||SPCC576.18c|conserved fungal protein|Schizosacchar... 29 0.18
SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharo... 29 0.24
SPCC553.06 |||oligosaccharyltransferase subunit|Schizosaccharomy... 29 0.24
SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomy... 28 0.31
SPAC1B3.13 |||U3 snoRNP-associated protein Nan1|Schizosaccharomy... 28 0.31
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 27 0.54
SPBC215.15 |sec13||COPII-coated vesicle component Sec13|Schizosa... 27 0.54
SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces po... 27 0.54
SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2 |... 27 0.72
SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr 2|||... 27 0.95
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 27 0.95
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 27 0.95
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 27 0.95
SPAC9G1.05 |||actin cortical patch component Aip1 |Schizosacchar... 26 1.3
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 26 1.3
SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces... 26 1.7
SPBC32F12.02 |rec14||recombination protein Rec14|Schizosaccharom... 26 1.7
SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6 family|Schi... 26 1.7
SPCC18B5.03 |wee1||dual specificity protein kinase Wee1|Schizosa... 26 1.7
SPCC18.13 |||tRNA |Schizosaccharomyces pombe|chr 3|||Manual 25 2.2
SPBC713.05 |||WD repeat protein, human MAPK organizer 1 |Schizos... 25 2.2
SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces po... 25 2.2
SPBC18H10.05 |||WD repeat protein Wdr44 family, WD repeat protei... 25 2.2
SPAC1486.09 |||ribosome biogenesis protein Nob1 |Schizosaccharom... 25 2.2
SPAC343.17c |||WD repeat protein, human WDR70 family|Schizosacch... 25 2.2
SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3 B... 25 2.9
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 25 2.9
SPAC959.03c |||U3 snoRNP-associated protein Utp7|Schizosaccharom... 25 2.9
SPBC2A9.03 |||conserved protein |Schizosaccharomyces pombe|chr 2... 25 3.8
SPAC25H1.07 |||DUF1620 family protein|Schizosaccharomyces pombe|... 25 3.8
SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces pombe... 25 3.8
SPAC694.06c |mrc1||mediator of replication checkpoint 1 |Schizos... 25 3.8
SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces... 24 5.1
SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein Mfr1|Schizosa... 24 5.1
SPBC29A3.06 |||CGI-48 family|Schizosaccharomyces pombe|chr 2|||M... 24 5.1
SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces pomb... 24 5.1
SPBC20F10.05 |||DuF1740 family protein|Schizosaccharomyces pombe... 24 6.7
SPCC24B10.17 |emp24||COPII-coated vesicle component Emp24 |Schiz... 24 6.7
SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor Cwf22|Schizosacch... 24 6.7
SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit Git... 24 6.7
SPCC645.09 |mrpl37||mitochondrial ribosomal protein subunit L37|... 23 8.9
SPAC12G12.07c |||conserved fungal protein|Schizosaccharomyces po... 23 8.9
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 43.2 bits (97), Expect = 1e-05
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 59 IITGGLDDYIKVWQLDNGKLEIKHQLEGHSLGVISVAVSPDGKSMCQIYQDNLV 112
+ GG+D IK+W L N H L+GH + S+A+S DG S+ DN V
Sbjct: 192 VFIGGIDGAIKIWDLRNN--HCSHVLKGHKDIITSLAISKDGSSLLSNSMDNTV 243
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 42.3 bits (95), Expect = 2e-05
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 41 TENAEELQDSQKESAENYIITGGLDDYIKVWQLDNGKLEIKHQLEGHSLGVISVAVSPDG 100
T ++ + D +Y ++ D I++W L+ G E HQ GH+ V+SV++SPD
Sbjct: 60 TGHSHFVSDCALSFDSHYALSASWDKTIRLWDLEKG--ECTHQFVGHTSDVLSVSISPDN 117
Query: 101 KSMCQIYQDNLV 112
+ + +D +
Sbjct: 118 RQVVSGSRDKTI 129
Score = 35.9 bits (79), Expect = 0.002
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 60 ITGGLDDYIKVWQLDNGKLEIKHQLEGHSLGVISVAVSPDGKSMC 104
++ G D +KVW L+ L H GH+ V +V +SPDG S+C
Sbjct: 166 VSAGWDKAVKVWDLETFSLRTSHY--GHTGYVSAVTISPDG-SLC 207
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 40.7 bits (91), Expect = 5e-05
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 58 YIITGGLDDYIKVWQLDNGKLEIKHQLEGHSLGVISVAVSPDGKSMCQIYQDNLV 112
+I G LD I++W +E QL GH V SVA SPDGK + DN +
Sbjct: 431 FIAAGSLDKVIRIWTSSGTLVE---QLHGHEESVYSVAFSPDGKYLVSGSLDNTI 482
Score = 36.7 bits (81), Expect = 9e-04
Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Query: 58 YIITGGLDDYIKVWQLDNGKLEIKHQLEGHSLGVISVAVSPDG 100
+II+G D I+ W D+ ++ L+GH+ VISVAVSP+G
Sbjct: 526 WIISGSKDRTIQFWSPDSPHSQLT--LQGHNNSVISVAVSPNG 566
Score = 33.5 bits (73), Expect = 0.008
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 12/55 (21%)
Query: 58 YIITGGLDDYIKVWQLD-----------NGKLEIKHQLEGHSLGVISVAVSPDGK 101
Y+++G LD+ IK+W+L G + K GH ++SV VSPDGK
Sbjct: 472 YLVSGSLDNTIKLWELQCVSNVAPSMYKEGGI-CKQTFTGHKDFILSVTVSPDGK 525
Score = 26.6 bits (56), Expect = 0.95
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 54 SAENYIITGGLDDYIKVWQLDNGKL-----EIKHQLEGHSLGVISVAVSPDGKSMCQIYQ 108
SA+ + G + V+ ++ GKL E + EG L V SVA SPDGK + +
Sbjct: 296 SADGKFLATGCNRAAMVFNVETGKLITLLQEESSKREG-DLYVRSVAFSPDGKYLATGVE 354
Query: 109 DNLV 112
D +
Sbjct: 355 DQQI 358
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 37.5 bits (83), Expect = 5e-04
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 56 ENYIITGGLDDYIKVWQLDNGKLEIKHQLEGHSLGVISVAVSPD 99
+ +I G LD I+VW + +E +LEGH V S+A SPD
Sbjct: 455 DQFIAVGSLDQIIRVWSVSGTLVE---RLEGHKESVYSIAFSPD 495
Score = 31.9 bits (69), Expect = 0.025
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 60 ITGGLDDYIKVWQLDNGKLEIKHQLEGHSLGVISVAVSPDGK 101
++G D ++ W L G+ + Q GH VISV SPDG+
Sbjct: 554 LSGSKDRSMQFWDLQTGQSYLTCQ--GHKNSVISVCFSPDGR 593
Score = 31.1 bits (67), Expect = 0.044
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 58 YIITGGLDDYIKVWQLDNGKLEIKHQLEGHSLGVISVAVSPDGK 101
Y++TG D IK+W L K +++ GH + S+ S +G+
Sbjct: 374 YLVTGTEDRQIKLWDLSTQK--VRYVFSGHEQDIYSLDFSHNGR 415
Score = 30.3 bits (65), Expect = 0.077
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 10/53 (18%)
Query: 59 IITGGLDDYIKVWQLDN----GKLEIKHQ------LEGHSLGVISVAVSPDGK 101
+++G LD IKVW+L G IK + GH+ V+SVAVSPD +
Sbjct: 499 LLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSR 551
>SPAC806.02c |||Par A family ATPase iron cluster assembly
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 608
Score = 36.7 bits (81), Expect = 9e-04
Identities = 18/71 (25%), Positives = 37/71 (52%)
Query: 42 ENAEELQDSQKESAENYIITGGLDDYIKVWQLDNGKLEIKHQLEGHSLGVISVAVSPDGK 101
E+ ++++ E+ +++G D+ I W+ D + QL+GH+ V ++A SP+G
Sbjct: 421 EHTQDVKVVTWHPTEDLLVSGSYDNSICFWRDDGDDWALTCQLQGHTNTVWALAFSPNGN 480
Query: 102 SMCQIYQDNLV 112
++ D V
Sbjct: 481 TLASADNDGNV 491
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 36.3 bits (80), Expect = 0.001
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 58 YIITGGLDDYIKVWQLDNGKLEIKHQLEGHSLGVISVAVSPDGKSMCQIYQDNLV 112
Y++TG D ++W + G GH+ V +VA++PDG +M + L+
Sbjct: 477 YVLTGSSDKTCRLWDVHRG--HSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLI 529
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 35.9 bits (79), Expect = 0.002
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 57 NYIITGGLDDYIKVWQLDNGKLEIKHQLEGHSLGVISVAVSPDG 100
+Y+++ D ++W + G +E+ Q EGHS G+ S+A PDG
Sbjct: 278 DYLVSASFDTTWRLWDVHTG-VELLMQ-EGHSEGIFSIACQPDG 319
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 33.9 bits (74), Expect = 0.006
Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 59 IITGGLDDYIKVWQLDNGKLEIKHQLEGHSLGVISVAVSPDGKSMC 104
+++G D+ +++W L +G L HS +ISV++S DG ++C
Sbjct: 153 LVSGSWDETVRIWNLQDGTC--LRMLPAHSEPIISVSISADG-TLC 195
Score = 27.5 bits (58), Expect = 0.54
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 58 YIITGGLDDYIKVWQLDNGKLEIKHQLEGHS 88
+IIT G D Y++VW L KH+ +G S
Sbjct: 351 FIITSGTDPYVRVWA--PSLLLSKHEKDGFS 379
>SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 473
Score = 33.5 bits (73), Expect = 0.008
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 53 ESAENYIITGGLDDYIKVWQLDNGKLEIKHQLEGHSLGVISVAVSPDGKSMCQIYQDNLV 112
E + TG D IK+W L +G L++ L GH V +AVSP + +D +V
Sbjct: 172 EPGNQWFCTGAGDRTIKIWDLASGVLKL--TLTGHIATVRGLAVSPRHPYLFSCGEDKMV 229
Score = 27.9 bits (59), Expect = 0.41
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 59 IITGGLDDYIKVWQLDNGKLEIKHQLEGHSLGVISVAVSPDGKSMCQIYQDNL 111
++TG +D I++W L GK L H V ++++ PD + DN+
Sbjct: 304 VVTGSMDSTIRLWDLAAGK--TLTTLTHHKKTVRALSLHPDEFTFASGSSDNI 354
>SPBC3H7.01 |spo14|stl1, SPBP16F5.01c|WD repeat protein
Spo14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 395
Score = 33.1 bits (72), Expect = 0.011
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 40 DTENAEELQDSQKESAENYIITGGLDDYIKVWQLDNGKLEIKHQLEGHSLGVISVAVSPD 99
D +NA+ + + II G D I+ LD KL Q+ HSL V + +SPD
Sbjct: 253 DLKNAKGVTCFCCDKENGMIIVAGADCSIRFMSLDLTKLS---QVYKHSLPVTDMQLSPD 309
Query: 100 GKSMCQIYQDNLV 112
+++ + D L+
Sbjct: 310 SEALVSVSADGLL 322
>SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 526
Score = 32.7 bits (71), Expect = 0.014
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 30 EPEKPKEGENDTENAEELQDSQKESAE-NYIITGGLDDYIKVWQLDNGKLEIKHQL-EGH 87
E EKP + E+ T N S+ S E N +T +D + VW +K+ + +G
Sbjct: 337 ETEKPSQTESTTNNDNIKAPSESSSEESNIFLTTSIDGVMNVWDHRMVDSVLKYPVPKGV 396
Query: 88 SLGVISVAVSPDGKSM 103
+S SPDG ++
Sbjct: 397 PPWAMSACWSPDGNNI 412
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 32.7 bits (71), Expect = 0.014
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Query: 31 PEKPKEGENDTENAEELQDSQKESAENYIITGGLDDYIKVWQLDNGKLEIKHQLEGHSLG 90
P+ P+ ++ NAE + +S NYI++ D Y+K W +E + H+
Sbjct: 35 PDAPRYTKSYMHNAEIYKCFPTKS--NYILSVSYDGYVKFWHKTPNGVEYIKEFHAHNAM 92
Query: 91 VISVAVSPD 99
++S +S D
Sbjct: 93 LLSAELSQD 101
>SPAC343.04c |gnr1||heterotrimeric G protein beta subunit
Gnr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 31.9 bits (69), Expect = 0.025
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 56 ENYIITGGLDDYIKVWQLDNGKLEIKHQLEGHSLGVISVAVSP-DGKSMCQIYQDNLV 112
+ ++++G DD I++W ++GKL L GH V VA +P D DN V
Sbjct: 440 DTFVLSGSEDDKIRIWHRESGKL--LATLSGHVKCVNYVAYNPVDPYQFASAGDDNTV 495
>SPAC25H1.08c |||ribosome biogenesis protein
Sqt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 399
Score = 31.9 bits (69), Expect = 0.025
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 58 YIITGGLDDYIKVWQLDNGKLEIKHQLEGHSLGVISVAVSPDGK 101
Y++T D I+ W + +G+L + GH ++ +A++PDGK
Sbjct: 340 YLLTACADCVIRKWDVRSGQL--LGEYTGHQEPILCMAITPDGK 381
Score = 26.6 bits (56), Expect = 0.95
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 58 YIITGGLDDYIKVWQLDNG 76
YI TGG+D +++W+ G
Sbjct: 118 YIATGGMDSQVRLWKSSTG 136
>SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 558
Score = 31.5 bits (68), Expect = 0.033
Identities = 12/54 (22%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 59 IITGGLDDYIKVWQLDNGKLEIKHQLEGHSLGVISVAVSPDGKSMCQIYQDNLV 112
+++G +D+ IK+W++ + + + +GH+ + ++ S DG+S D +
Sbjct: 282 LLSGSMDNQIKIWEVYHDR-SLLRTFQGHARPIRDLSFSQDGRSFLSTSFDKTI 334
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 31.1 bits (67), Expect = 0.044
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 8/65 (12%)
Query: 40 DTENAEELQDSQKESAENYIITGGLDDYIKVWQLDNGKLEIKHQLEGH--SLGVI-SVAV 96
DT+ D +S+++++++ G D ++K+W L I+H +E H G I ++ V
Sbjct: 169 DTDIDSGDMDVDSKSSDSFLLSVGKDSFMKLWD-----LSIQHCVETHVDHQGEIWAMCV 223
Query: 97 SPDGK 101
SPD K
Sbjct: 224 SPDAK 228
Score = 29.9 bits (64), Expect = 0.10
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 58 YIITGGLDDYIKVWQLDNGKLEIKHQLEGHSLGVISVAVSPDGKSMCQIYQDNLV 112
++ LD+ +KV+ LD+ K + L GH L V+S+ +S D K + D V
Sbjct: 548 FVAASLLDNTVKVYYLDSLKFFLN--LYGHKLPVLSMDISYDSKLLVTCSADKNV 600
Score = 24.6 bits (51), Expect = 3.8
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 59 IITGGLDDYIKVWQLDNGKLEIKHQLEGHSLGVISVAVSPD 99
++T D +K+W LD G + + H ++ V PD
Sbjct: 591 LVTCSADKNVKIWGLDFG--DCHKSIFAHQDSIMEVTFQPD 629
Score = 23.8 bits (49), Expect = 6.7
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 77 KLEIKHQLEGHSLGVISVAVSPDGKSMCQIYQDNLV 112
KLE Q++ + V++V +SPDG+ + DN V
Sbjct: 524 KLEQTRQID-FTDDVLAVKISPDGRFVAASLLDNTV 558
>SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein
Pop2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 703
Score = 31.1 bits (67), Expect = 0.044
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 53 ESAENYIITGGLDDYIKVWQLDNGKLEIKHQLEGH 87
E N I+G +D I+VW L G K+ LEGH
Sbjct: 556 EPERNICISGSMDKSIRVWDLSTG--TCKYVLEGH 588
Score = 27.5 bits (58), Expect = 0.54
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 56 ENYIITGGLDDYIKVWQLDNGK 77
+N +I+G D I++W L+ GK
Sbjct: 599 QNRLISGSADSTIRIWDLNTGK 620
Score = 23.4 bits (48), Expect = 8.9
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 53 ESAENYIITGGLDDYIKVWQL 73
E + YI++G D ++VW+L
Sbjct: 454 EPDQPYIVSGSRDHTLRVWKL 474
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 31.1 bits (67), Expect = 0.044
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 55 AENYIITGGLDDYIKVWQLD--NGKLEIKHQLEGHSLGVISVAVS 97
+ENYII+ D +VW+LD + H L GH V SV S
Sbjct: 312 SENYIISSSRDHTARVWRLDATSPAEACMHVLRGHLASVNSVQYS 356
Score = 23.8 bits (49), Expect = 6.7
Identities = 6/19 (31%), Positives = 13/19 (68%)
Query: 59 IITGGLDDYIKVWQLDNGK 77
I++GG D +++W + G+
Sbjct: 442 IVSGGYDGTVRIWNFNTGE 460
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 30.3 bits (65), Expect = 0.077
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 59 IITGGLDDYIKVWQLDNGKLEIKHQLEGHSLGVISVAVSPDGKSMCQIYQDNLV 112
+++ D +KVW + + K+ K L GH V +V SPDG+ + D V
Sbjct: 446 LVSSSQDTTLKVWDVRSKKM--KFDLPGHEDQVFAVDWSPDGQRVASGGADKAV 497
Score = 28.3 bits (60), Expect = 0.31
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 56 ENYIITGGLDDYIKVWQLDNGKLEIKHQLEGHSLGVISVAVSPD 99
+N+I + D I++W +GK H L+GH+ V +++S +
Sbjct: 280 QNWIYSSSYDKTIRIWDAKDGK--CLHILKGHAARVNHLSLSTE 321
>SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor
Raf1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 638
Score = 30.3 bits (65), Expect = 0.077
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 36 EGENDTENAEELQDSQKESAENYIITGGLDDYIKVWQL 73
+G N+ E + +Q + N +TGG D +KVW L
Sbjct: 538 DGANEEEVDAGINMAQWQPKGNLFVTGGSDGIVKVWDL 575
>SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 494
Score = 29.1 bits (62), Expect = 0.18
Identities = 13/46 (28%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 54 SAENYIITGGLDDYIKVWQLDNGKLEIKHQLEGHSLGVISVAVSPD 99
S +++GGLD ++K++ + + K + H ++ +S ++S+ +SPD
Sbjct: 260 SENTRLLSGGLDGHVKIYNISDWK--VVHGMK-YSGPILSMGLSPD 302
Score = 25.4 bits (53), Expect = 2.2
Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Query: 55 AENYIITGGLDDYIKVWQLDNGKLEIKHQLEGH 87
A ++G D +KVW L G +++ L GH
Sbjct: 135 ANTTFLSGSDDKTVKVWDLSTG--AVQYDLSGH 165
>SPCC126.01c ||SPCC576.18c|conserved fungal
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 369
Score = 29.1 bits (62), Expect = 0.18
Identities = 11/44 (25%), Positives = 23/44 (52%)
Query: 56 ENYIITGGLDDYIKVWQLDNGKLEIKHQLEGHSLGVISVAVSPD 99
E +++G D + VW + + + ++L GHS G+ + P+
Sbjct: 144 EGLLLSGSTDASLIVWDVSSQPSRLLYKLTGHSRGIECITRQPN 187
Score = 27.1 bits (57), Expect = 0.72
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Query: 33 KPKEGENDTENAEELQDSQKESAENYIITGGLDDYIKVWQLDNGKLEIKHQLEGHS 88
K +G + +++ +K+ +I TG D IK W + G E L GH+
Sbjct: 79 KTYKGHSGPVTCCQIESLRKDGKVRHIYTGSWDHTIKKWNVSTG--ECVETLIGHT 132
Score = 25.0 bits (52), Expect = 2.9
Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 6/49 (12%)
Query: 32 EKPKEGENDTENAEELQDSQKESA------ENYIITGGLDDYIKVWQLD 74
E+ + + T N +++ ES ++Y+I+ LD I+VW L+
Sbjct: 286 EEIRVWDTTTGNVKDIYSGHYESVTKILQWKSYLISSSLDQTIRVWDLE 334
>SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 651
Score = 28.7 bits (61), Expect = 0.24
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 56 ENYIITGGLDDYIKVWQLDNGKLEIKHQLE 85
+++I TG +D +++W LDN L + +E
Sbjct: 384 DSFIATGSMDTTVRLWNLDNDVLHKDNPVE 413
>SPCC553.06 |||oligosaccharyltransferase
subunit|Schizosaccharomyces pombe|chr 3|||Manual
Length = 271
Score = 28.7 bits (61), Expect = 0.24
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 23 CCTWSRIEPEKPKEGEN-DTENAEELQDSQKESAENYIITGGLDDYIKVWQLDNGKLEIK 81
C +W+ E ++ ++ENA +L+ SQ +S+ Y +TG +K + NG I
Sbjct: 18 CASWNVEEGTLQLSSQDLESENAYDLKFSQIQSSTVYELTGDETLNLKFTCILNGTGAIP 77
Query: 82 HQ 83
HQ
Sbjct: 78 HQ 79
>SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 314
Score = 28.3 bits (60), Expect = 0.31
Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 58 YIITGGLDDYIKVWQLDNGKLEIKHQLEGHSLGVISVAVS 97
Y++T D ++W+L +G E Q GH + VA++
Sbjct: 273 YLVTASSDHVARLWELSSG--ETIRQYSGHHKAAVCVALN 310
Score = 25.8 bits (54), Expect = 1.7
Identities = 11/54 (20%), Positives = 24/54 (44%)
Query: 58 YIITGGLDDYIKVWQLDNGKLEIKHQLEGHSLGVISVAVSPDGKSMCQIYQDNL 111
++ T D + +W ++ ++ +L+GH V A S D + D++
Sbjct: 229 HLATCSADATVNIWSTEDMSFMLERRLQGHQRWVWDCAFSADSTYLVTASSDHV 282
>SPAC1B3.13 |||U3 snoRNP-associated protein Nan1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 800
Score = 28.3 bits (60), Expect = 0.31
Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 58 YIITGGLDDYIKVWQLDNGKLEIKHQLEGHSLGVISVAVSPDGKSMCQIYQDNLVI 113
Y+++GG + + +WQ++ + +L G S ++S+A S D S DN ++
Sbjct: 276 YLLSGGQEGVLVLWQMETSHRQFLPRL-GSS--ILSIATSHDSDSYALHLGDNSLV 328
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 27.5 bits (58), Expect = 0.54
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 60 ITGGLDDYIKVWQLDNGKLEIKHQLEGHS 88
I+ G D I++W L++G E+ L GHS
Sbjct: 633 ISAGTDAKIRIWNLESG--ELLQTLHGHS 659
Score = 25.4 bits (53), Expect = 2.2
Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Query: 59 IITGGLDDYIKVWQLDNGKLEIKHQLEGHSLGVISVAVSPDGKS 102
++TG D ++VW L G E K GH+ + + + +S
Sbjct: 459 LVTGSTDRTVRVWDLRTG--ECKQVFYGHTSTIRCIKIVQGNQS 500
>SPBC215.15 |sec13||COPII-coated vesicle component
Sec13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 27.5 bits (58), Expect = 0.54
Identities = 13/49 (26%), Positives = 25/49 (51%)
Query: 40 DTENAEELQDSQKESAENYIITGGLDDYIKVWQLDNGKLEIKHQLEGHS 88
DT++ + + D+ + + T D IKV+ ++N + + L GHS
Sbjct: 5 DTQHDDMIHDAILDYYGKRLATCSSDQTIKVFSIENNQQTLLETLRGHS 53
Score = 24.2 bits (50), Expect = 5.1
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 59 IITGGLDDYIKVWQLDNG--KLEIKHQLEGHSLGVISVAVSP 98
+ T G D+ +K+W D G ++ L GH VA +P
Sbjct: 174 LATAGCDNLVKIWAFDAGVNNWILEDTLAGHVDWTRDVAWAP 215
>SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 27.5 bits (58), Expect = 0.54
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Query: 56 ENYIITGGLDDYIKVWQLDNGKLEIKHQLEGHSLGVISVAVSPDGKSMC 104
E+ ITG D IK+W NG+ +K L H+ V S+ P G + C
Sbjct: 148 EDIFITGSADKLIKIW---NGEKLVKSIL-AHNDCVRSLCQIPGGFASC 192
Score = 24.6 bits (51), Expect = 3.8
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 4/36 (11%)
Query: 59 IITGGLDDYIKVWQLDNGKLEIKHQLEGHSLGVISV 94
IITG D +VW L + K+ L+GH V +V
Sbjct: 112 IITGSWDSTARVWALG----QCKYVLKGHQSSVWAV 143
>SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 760
Score = 27.1 bits (57), Expect = 0.72
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 84 LEGHSLGVISVAVSPDGKSMCQIYQDNLV 112
L+GHSL V ++ SPD + + +D LV
Sbjct: 574 LKGHSLTVTTIKFSPDDRYILSAGRDRLV 602
Score = 26.6 bits (56), Expect = 0.95
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 57 NYIITGGLDDYIKVWQLDNGKLEIKHQLEGHSLGVISVAVSPDGK 101
N ++ G ++W+ D G+ + GH+ V VA P+GK
Sbjct: 339 NCVVCWGRTGGWRLWKQDAGQWLQLPSISGHTKSVKGVAWDPEGK 383
>SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr
2|||Manual
Length = 404
Score = 26.6 bits (56), Expect = 0.95
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 54 SAENYIITGGLDDYIKVWQLDNGK 77
S Y+ + G DD I+VW +++G+
Sbjct: 256 SDARYLASCGTDDRIRVWNMESGR 279
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 26.6 bits (56), Expect = 0.95
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
Query: 59 IITGGLDDYIKVWQLDNGKLEIKHQLEGHSLGVIS 93
+ TGG + +KVW D + H GH GVIS
Sbjct: 118 LATGGAEGLVKVW--DIAGAYVTHSFRGHG-GVIS 149
Score = 24.2 bits (50), Expect = 5.1
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 59 IITGGLDDYIKVWQLDNGKLEIKHQLEGHSLGVISVAVSPDG 100
+++ D +KVW L +G E L+ H V ++A DG
Sbjct: 564 VVSAAADGLVKVWSLSSG--ECVATLDNHEDRVWALASRFDG 603
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 26.6 bits (56), Expect = 0.95
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 12/67 (17%)
Query: 59 IITGGLDDYIKVW---------QLDNGKLEIKHQL---EGHSLGVISVAVSPDGKSMCQI 106
I TGGLD I++W + +N ++ QL H+ V SV SP+G+ +
Sbjct: 33 IATGGLDGTIRIWSTEAINRENENENENEDLPKQLCCMSTHTGTVTSVRFSPNGQYLASG 92
Query: 107 YQDNLVI 113
D +VI
Sbjct: 93 SDDRVVI 99
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 26.6 bits (56), Expect = 0.95
Identities = 11/45 (24%), Positives = 21/45 (46%)
Query: 65 DDYIKVWQLDNGKLEIKHQLEGHSLGVISVAVSPDGKSMCQIYQD 109
D+ + +W + L + + H V+ A+SPDG+ + D
Sbjct: 413 DNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASD 457
>SPAC9G1.05 |||actin cortical patch component Aip1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 595
Score = 26.2 bits (55), Expect = 1.3
Identities = 19/84 (22%), Positives = 35/84 (41%)
Query: 18 EDAIWCCTWSRIEPEKPKEGENDTENAEELQDSQKESAENYIITGGLDDYIKVWQLDNGK 77
ED + T S I+ + G + + + ++ GG D + + L+ G+
Sbjct: 409 EDCLILVTVSDIQVLRSLTGVSTAKTIYQPSAVASHPLKSEFCVGGEDCCVYIHTLEKGE 468
Query: 78 LEIKHQLEGHSLGVISVAVSPDGK 101
L Q + + + +A SPDGK
Sbjct: 469 LCEVAQCKDSTAPITCLAYSPDGK 492
Score = 24.6 bits (51), Expect = 3.8
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 42 ENAEELQDSQKE-SAENYIITGGLDDYIKVWQL 73
+NA L +Q E +EN +++ G D IKVW +
Sbjct: 561 KNAHSLGATQVEWVSENELLSTGSDAAIKVWSV 593
Score = 23.4 bits (48), Expect = 8.9
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 48 QDSQKESAENYIITGGLDDYIKVWQLDNG 76
Q Q A++++IT G+DD ++V + G
Sbjct: 360 QVMQMIMADDHVITIGMDDTLRVIDIKQG 388
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 26.2 bits (55), Expect = 1.3
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 45 EELQDSQKESAENYIITGGLDDYIKVWQLDNG 76
+ L Q S IITG D IKVW +++G
Sbjct: 340 DALSTLQYSSDGQRIITGADDGKIKVWDMNSG 371
Score = 26.2 bits (55), Expect = 1.3
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 54 SAENYIITGGLDDYIKVWQLDNGKLEIKHQLEGHSLGVISVAVSPDGKSMC 104
S+ + + +G D +++W + + + I L S V+S+A PDGK +C
Sbjct: 477 SSGSLLASGSWDKTVRIWDIFS-RSGIVEPLPIPS-DVLSLAFHPDGKEVC 525
>SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 796
Score = 25.8 bits (54), Expect = 1.7
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 58 YIITGGLDDYIKVWQLDNGKLEIKHQLEGHSLGV 91
Y+IT G D+ IKVW D LEGH+ V
Sbjct: 200 YLITAGDDNLIKVW--DYQTKACVRILEGHTNNV 231
>SPBC32F12.02 |rec14||recombination protein
Rec14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 25.8 bits (54), Expect = 1.7
Identities = 17/78 (21%), Positives = 30/78 (38%)
Query: 26 WSRIEPEKPKEGENDTENAEELQDSQKESAENYIITGGLDDYIKVWQLDNGKLEIKHQLE 85
WS + E E DT + + EN +++ G + VW + +
Sbjct: 41 WSIGDAEHSLVEEIDTPHKLGVHHLATSLDENVVVSCGFGQDVYVWNPETNEFRDLGNNA 100
Query: 86 GHSLGVISVAVSPDGKSM 103
H S +SPDG+++
Sbjct: 101 QHPSECWSSCISPDGQTI 118
Score = 23.8 bits (49), Expect = 6.7
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 58 YIITGGLDDYIKVWQLDNGKLEIKHQLEGHSLGVISVAVSPDGKSMCQIYQDNLVI 113
+I++G + + + G+L H L GH+ V SVA SP G ++ D+ +I
Sbjct: 159 FIVSGHQTGQLFLISTETGRLF--HVLSGHTSPVRSVAFSP-GSTLLAAAGDSKMI 211
>SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 984
Score = 25.8 bits (54), Expect = 1.7
Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 4/58 (6%)
Query: 56 ENYIITGGLDDYIKVWQLDNGK----LEIKHQLEGHSLGVISVAVSPDGKSMCQIYQD 109
E YI + I VW+ + + I L GH + S DG+ +C + +D
Sbjct: 158 EIYIASASAFQQIYVWKFNYNNPPSCVSIDTYLVGHEGACFDLKFSSDGRYLCSVSED 215
>SPCC18B5.03 |wee1||dual specificity protein kinase
Wee1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 877
Score = 25.8 bits (54), Expect = 1.7
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Query: 39 NDTENAEELQDSQKESAENYII-TGGLDDYIKVWQL 73
+ T+N L S +E+ N II GGLD ++ W L
Sbjct: 787 SSTDNGSSLTSSSRETPANSIIGQGGLDRVVE-WML 821
>SPCC18.13 |||tRNA |Schizosaccharomyces pombe|chr 3|||Manual
Length = 421
Score = 25.4 bits (53), Expect = 2.2
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 59 IITGGLDDYIKVWQLDNGK 77
+I+GG D+++ VW L+N K
Sbjct: 240 LISGGGDNHVFVWDLENFK 258
>SPBC713.05 |||WD repeat protein, human MAPK organizer 1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 25.4 bits (53), Expect = 2.2
Identities = 11/37 (29%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 63 GLDDYIKVWQLDNGKLEIKHQLEGHSLGVISVAVSPD 99
G D +I+VW ++ GK++ +L GH + ++ + D
Sbjct: 75 GGDKFIQVWDVNTGKVD--RRLGGHLAQINTIRYNED 109
>SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 556
Score = 25.4 bits (53), Expect = 2.2
Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 41 TENAEELQDSQKESAENYIITGGLDDYIKVWQLDNGKLEIKHQLEGHSLGVISVAVSP 98
T + +E+ + S EN + +GG D+ + VW D + + + H V ++ SP
Sbjct: 371 TAHRQEVCGLEWNSNENLLASGGNDNALMVW--DKFEEKPLYSFHNHIAAVKAITWSP 426
>SPBC18H10.05 |||WD repeat protein Wdr44 family, WD repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 586
Score = 25.4 bits (53), Expect = 2.2
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 56 ENYIITGGLDDYIKVWQLDNGKLEIKHQLEGHSLGVISVAVSPDGKSM 103
+ Y ++G LD I++W + K+ +LE V ++ PDG+S+
Sbjct: 308 DRYFVSGSLDCKIQLWSILRHKILHWTELE---YVVSTICFYPDGESI 352
>SPAC1486.09 |||ribosome biogenesis protein Nob1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 388
Score = 25.4 bits (53), Expect = 2.2
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 35 KEGENDTENAEELQDSQKESAENYIITG 62
K +DT + +E ++S +SAEN ++ G
Sbjct: 131 KPTSSDTASVKETENSDPKSAENEVLEG 158
>SPAC343.17c |||WD repeat protein, human WDR70
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 576
Score = 25.4 bits (53), Expect = 2.2
Identities = 8/29 (27%), Positives = 18/29 (62%)
Query: 57 NYIITGGLDDYIKVWQLDNGKLEIKHQLE 85
NY+++ G D+ ++VW L N + +++
Sbjct: 311 NYLLSRGEDNALRVWDLRNSNKCVNERID 339
>SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3
Brl1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 692
Score = 25.0 bits (52), Expect = 2.9
Identities = 11/27 (40%), Positives = 13/27 (48%)
Query: 24 CTWSRIEPEKPKEGENDTENAEELQDS 50
C W RIE K E N + EE+ S
Sbjct: 407 CIWDRIERSKTGEMNNVLDEKEEISAS 433
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 25.0 bits (52), Expect = 2.9
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Query: 59 IITGGLDDYIKVWQLDNGKLEIKHQLEGHSLGVISVAVSPD 99
+++G D +K+W GK + L GH+ V SV + D
Sbjct: 366 LVSGSADCTVKLWHFSGGK---RITLRGHTGPVNSVRIIRD 403
>SPAC959.03c |||U3 snoRNP-associated protein
Utp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 520
Score = 25.0 bits (52), Expect = 2.9
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 58 YIITGGLDDYIKVWQL 73
Y++T G D +KVW L
Sbjct: 279 YMVTAGADSLLKVWDL 294
>SPBC2A9.03 |||conserved protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 426
Score = 24.6 bits (51), Expect = 3.8
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 57 NYIITGGLDDYIKVWQLDNGKLEIKHQLEGHSLGVISVAVSPDGKSMCQIYQDNLV 112
N + TGG D KVW + ++ L V ++ SP G+S+ Q + V
Sbjct: 313 NILATGGQDTTAKVWDIRALGKSFRN-LGSQMSAVTNLCFSPLGESLAVTEQADFV 367
>SPAC25H1.07 |||DUF1620 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 885
Score = 24.6 bits (51), Expect = 3.8
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 44 AEELQDSQKESAENYIITGGLDDYIKVWQLDNGKLEIKHQL 84
A E N+IIT DY+ +W NG L+ K +L
Sbjct: 79 APETSQLNYNPVTNFIITVD-KDYLYIWNSKNGILDRKIEL 118
>SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 24.6 bits (51), Expect = 3.8
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 57 NYIITGGLDDYIKVWQLD 74
NY+ G D I++W LD
Sbjct: 203 NYVAVGTFDPEIEIWDLD 220
>SPAC694.06c |mrc1||mediator of replication checkpoint 1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1019
Score = 24.6 bits (51), Expect = 3.8
Identities = 14/51 (27%), Positives = 23/51 (45%)
Query: 4 TTLYYLQLKKENAHEDAIWCCTWSRIEPEKPKEGENDTENAEELQDSQKES 54
+T Y+Q + +A + I T+S+ P +D N Q SQ +S
Sbjct: 591 STSLYVQNSQPSASQLTIVDATYSQPPPRWESSSRDDKTNTSSTQPSQVDS 641
>SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 879
Score = 24.2 bits (50), Expect = 5.1
Identities = 9/36 (25%), Positives = 21/36 (58%)
Query: 28 RIEPEKPKEGENDTENAEELQDSQKESAENYIITGG 63
R+E + + E+D + ++++S++E N +I G
Sbjct: 686 RLEAGEEFDSEDDNSDDMDIEESEEEMDTNMVIDSG 721
>SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein
Mfr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 24.2 bits (50), Expect = 5.1
Identities = 15/68 (22%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 38 ENDTENAEELQDSQKESAENYIIT--GGLDDYIKVWQLDNGKLEIKHQLEGHSLGVISVA 95
+N + ++ + N I+T G + + +W+ + L+ L H+ V+ ++
Sbjct: 329 QNKLDTGSQVCNMAWSKTSNEIVTTHGFAKNQVSLWKYPS--LKNIANLTAHTNRVLYLS 386
Query: 96 VSPDGKSM 103
+SPDG+S+
Sbjct: 387 MSPDGQSI 394
>SPBC29A3.06 |||CGI-48 family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 556
Score = 24.2 bits (50), Expect = 5.1
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 59 IITGGLDDYIKVWQLDNGKLEIKHQLEGHSLGVISVAVSPDGK 101
++T G D ++++QLD + L S + + PDGK
Sbjct: 232 LLTCGFDRTLRIYQLDGKVNPLVTSLHLRSSALQTALFHPDGK 274
>SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 24.2 bits (50), Expect = 5.1
Identities = 8/29 (27%), Positives = 18/29 (62%)
Query: 57 NYIITGGLDDYIKVWQLDNGKLEIKHQLE 85
N++ +GG D +++W++ G+ K L+
Sbjct: 392 NWLASGGDDGVLRIWEVMTGRCVWKCSLD 420
>SPBC20F10.05 |||DuF1740 family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 972
Score = 23.8 bits (49), Expect = 6.7
Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Query: 32 EKPKEGENDTEN-AEELQDSQKESAENYIITGGLDDYIKVWQLDNGKLE 79
+ PK E + L D + +N+ G+ +K+W L+ K +
Sbjct: 387 DTPKFSEENARGWCNVLDDESSQQNQNFSSEIGIFQTVKLWYLNESKFD 435
>SPCC24B10.17 |emp24||COPII-coated vesicle component Emp24
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 199
Score = 23.8 bits (49), Expect = 6.7
Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 45 EELQDSQKESAENYIITGGLDDYIKVWQLDNGKLEIKHQLEGHSLGVISVAVSPDGKSMC 104
E L+++ + S GG D + + N +I HQ +S+ S V GK M
Sbjct: 36 ENLRNNDQMSVTYQTNVGG--DQLVSMSIYNPAGQIMHQEVPNSMAQYSFTVKNPGKYMY 93
Query: 105 QIYQDNL 111
Y D L
Sbjct: 94 CFYNDAL 100
>SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor
Cwf22|Schizosaccharomyces pombe|chr 2|||Manual
Length = 834
Score = 23.8 bits (49), Expect = 6.7
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 32 EKPKEGENDTENAEELQDSQKESAEN 57
E E E D E++EE +S+++ + N
Sbjct: 370 EDDDENEEDEEDSEETSESEEDESVN 395
>SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit
Git5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 305
Score = 23.8 bits (49), Expect = 6.7
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 54 SAENYIITGGLDDYIKVWQL 73
S N +TGG D K+W L
Sbjct: 158 SNPNLFVTGGCDKLAKLWDL 177
>SPCC645.09 |mrpl37||mitochondrial ribosomal protein subunit
L37|Schizosaccharomyces pombe|chr 3|||Manual
Length = 139
Score = 23.4 bits (48), Expect = 8.9
Identities = 8/29 (27%), Positives = 18/29 (62%)
Query: 27 SRIEPEKPKEGENDTENAEELQDSQKESA 55
SR+ P+KP+ + T +A+++ + S+
Sbjct: 48 SRVSPKKPQHNSDATSSAQKVANKTHTSS 76
>SPAC12G12.07c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 412
Score = 23.4 bits (48), Expect = 8.9
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 27 SRIEPEKPKEGENDTENAEELQDSQKESAENY 58
+RI EK K TENA+ ++ + + E Y
Sbjct: 89 TRIRDEKHKRQFEATENAKRKEEIEAQYREGY 120
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.311 0.131 0.390
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 587,907
Number of Sequences: 5004
Number of extensions: 24543
Number of successful extensions: 194
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 90
Number of HSP's gapped (non-prelim): 116
length of query: 113
length of database: 2,362,478
effective HSP length: 64
effective length of query: 49
effective length of database: 2,042,222
effective search space: 100068878
effective search space used: 100068878
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 48 (23.4 bits)
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