GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002360-TA|BGIBMGA002360-PA|IPR001680|WD-40 repeat,
IPR011046|WD40-like
         (113 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    26   0.38 
AF457546-1|AAL68776.1|  182|Anopheles gambiae 30 kDa protein pro...    24   1.5  
AY330183-1|AAQ16289.1|  190|Anopheles gambiae odorant-binding pr...    23   2.0  
AJ618925-1|CAF02004.1|  204|Anopheles gambiae odorant-binding pr...    23   2.0  
AJ278310-1|CAB93496.1|  219|Anopheles gambiae serine protease-li...    22   4.6  
AF203337-1|AAF19832.1|  184|Anopheles gambiae immune-responsive ...    22   4.6  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    22   4.6  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           22   6.1  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            21   8.1  
AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.    21   8.1  

>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 25.8 bits (54), Expect = 0.38
 Identities = 13/42 (30%), Positives = 21/42 (50%)

Query: 35  KEGENDTENAEELQDSQKESAENYIITGGLDDYIKVWQLDNG 76
           K+ E  TE+AE+  D +KE    Y +     D + + +  NG
Sbjct: 443 KDAEGVTESAEDCYDKEKEHRIPYSLPKSTFDRLDLLKKPNG 484


>AF457546-1|AAL68776.1|  182|Anopheles gambiae 30 kDa protein
           protein.
          Length = 182

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/21 (47%), Positives = 14/21 (66%)

Query: 35  KEGENDTENAEELQDSQKESA 55
           +EG  DTE+  E  DS+ +SA
Sbjct: 87  EEGATDTESGAEGDDSEMDSA 107


>AY330183-1|AAQ16289.1|  190|Anopheles gambiae odorant-binding
           protein AgamOBP57 protein.
          Length = 190

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/26 (34%), Positives = 14/26 (53%)

Query: 24  CTWSRIEPEKPKEGENDTENAEELQD 49
           C W +     P+E  +D+E   EL+D
Sbjct: 146 CLWRQFTLACPEEFRDDSEKCVELRD 171


>AJ618925-1|CAF02004.1|  204|Anopheles gambiae odorant-binding
           protein OBP14426 protein.
          Length = 204

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/26 (34%), Positives = 14/26 (53%)

Query: 24  CTWSRIEPEKPKEGENDTENAEELQD 49
           C W +     P+E  +D+E   EL+D
Sbjct: 160 CLWRQFTLACPEEFRDDSEKCVELRD 185


>AJ278310-1|CAB93496.1|  219|Anopheles gambiae serine
          protease-like protein protein.
          Length = 219

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 20 AIWCCTWSRIEPEKPKEGENDTENAEELQDSQ 51
          A  C    +IE  K + GE DT+   E+ D Q
Sbjct: 3  AAHCVQNRKIEEVKVRLGEWDTQTKNEMFDYQ 34


>AF203337-1|AAF19832.1|  184|Anopheles gambiae immune-responsive
           serine protease-relatedprotein ISPR9 protein.
          Length = 184

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 20  AIWCCTWSRIEPEKPKEGENDTENAEELQDSQ 51
           A  C    +IE  K + GE DT+   E+ D Q
Sbjct: 111 AAHCVQNRKIEEVKVRLGEWDTQTKNEMFDYQ 142


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/28 (32%), Positives = 15/28 (53%)

Query: 84  LEGHSLGVISVAVSPDGKSMCQIYQDNL 111
           L+G     + VA+    +  C++YQD L
Sbjct: 508 LDGIPNAAVKVAIEEYTEEFCRLYQDCL 535


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 13/45 (28%), Positives = 20/45 (44%)

Query: 14   ENAHEDAIWCCTWSRIEPEKPKEGENDTENAEELQDSQKESAENY 58
            ENAH     C  ++R+  E   E   +    + LQD    S +N+
Sbjct: 1016 ENAHHAIFECPRFARVRMEYFGELGPNPVTPDSLQDFLMGSQDNW 1060


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/40 (22%), Positives = 19/40 (47%)

Query: 38  ENDTENAEELQDSQKESAENYIITGGLDDYIKVWQLDNGK 77
           E  T  A+  Q  +++  +     GG ++  + W+ + GK
Sbjct: 215 EKKTVVADAKQKQKQDDTKALPAAGGKEEETRQWRKEGGK 254


>AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.
          Length = 406

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/35 (25%), Positives = 18/35 (51%)

Query: 32  EKPKEGENDTENAEELQDSQKESAENYIITGGLDD 66
           ++ +EGE   ++A+E ++ +K   E        DD
Sbjct: 344 KETQEGEKKVKDAQEAEERKKAEGEAAAEEAAKDD 378


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.311    0.131    0.390 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,350
Number of Sequences: 2123
Number of extensions: 4759
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 10
length of query: 113
length of database: 516,269
effective HSP length: 56
effective length of query: 57
effective length of database: 397,381
effective search space: 22650717
effective search space used: 22650717
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 43 (21.4 bits)