Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002359-TA|BGIBMGA002359-PA|IPR007273|SCAMP
(606 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY578812-1|AAT07317.1| 932|Anopheles gambiae wishful thinking p... 29 0.47
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 29 0.47
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 29 0.47
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 28 0.82
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 27 1.1
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 27 1.4
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 27 1.9
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 26 2.5
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein. 26 2.5
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 26 2.5
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 25 4.4
>AY578812-1|AAT07317.1| 932|Anopheles gambiae wishful thinking
protein.
Length = 932
Score = 28.7 bits (61), Expect = 0.47
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 70 PPASSQYTRPAQQASAPPP 88
PP S++TR +AS+PPP
Sbjct: 835 PPRGSRHTRQGSEASSPPP 853
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 28.7 bits (61), Expect = 0.47
Identities = 11/18 (61%), Positives = 16/18 (88%)
Query: 259 LAELQYGYKIGKSTLSAI 276
L+E QYG+++G+STL AI
Sbjct: 527 LSEYQYGFRLGRSTLLAI 544
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 28.7 bits (61), Expect = 0.47
Identities = 12/22 (54%), Positives = 18/22 (81%)
Query: 259 LAELQYGYKIGKSTLSAIIRQV 280
L++ QYG++ G+ST+SAI R V
Sbjct: 598 LSDAQYGFRRGRSTISAIQRVV 619
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 27.9 bits (59), Expect = 0.82
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 259 LAELQYGYKIGKSTLSAIIRQV 280
L++ QYG++ G+ST SAI R V
Sbjct: 537 LSDAQYGFRRGRSTFSAIQRVV 558
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 27.5 bits (58), Expect = 1.1
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 252 YLASGCSLAELQYGYKIGKSTLSAIIR 278
+L S L++ QYG++ G+ST+ AI R
Sbjct: 514 HLESTGGLSDPQYGFRKGRSTVDAITR 540
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 27.1 bits (57), Expect = 1.4
Identities = 10/18 (55%), Positives = 16/18 (88%)
Query: 259 LAELQYGYKIGKSTLSAI 276
L++ QYG++ G+ST+SAI
Sbjct: 542 LSDAQYGFRRGRSTISAI 559
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 26.6 bits (56), Expect = 1.9
Identities = 11/18 (61%), Positives = 15/18 (83%)
Query: 259 LAELQYGYKIGKSTLSAI 276
LAE QYG++ G+ST+ AI
Sbjct: 529 LAENQYGFRRGRSTVQAI 546
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 26.2 bits (55), Expect = 2.5
Identities = 11/22 (50%), Positives = 18/22 (81%)
Query: 259 LAELQYGYKIGKSTLSAIIRQV 280
L++ Q+G++ G+ST+SAI R V
Sbjct: 583 LSDRQFGFRRGRSTVSAIQRVV 604
>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
Length = 1494
Score = 26.2 bits (55), Expect = 2.5
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 474 NDTVNASSSFTSYDSTAVDASSDMESISGQVTLESIGQLLDMKLAPGSSFMTHLRSSLRK 533
+++V+ +SS++SY S + ++ + S TL + G K P S+ R S+R
Sbjct: 514 SNSVSVNSSYSSYQSASPGVATVPDGGSPGATLATPG---GTKARPPSAQQVDGRESVRS 570
Query: 534 DITEMV------SQEVNRAVEGLRV 552
+T + S VNR V+G V
Sbjct: 571 PLTVSMDSGISSSGPVNRRVQGSSV 595
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 26.2 bits (55), Expect = 2.5
Identities = 11/22 (50%), Positives = 16/22 (72%)
Query: 259 LAELQYGYKIGKSTLSAIIRQV 280
L+ QYG++ GKST+ I+R V
Sbjct: 543 LSPNQYGFRRGKSTVQGILRVV 564
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 25.4 bits (53), Expect = 4.4
Identities = 10/18 (55%), Positives = 15/18 (83%)
Query: 259 LAELQYGYKIGKSTLSAI 276
L+E Q+G++ G+STL AI
Sbjct: 532 LSEQQFGFRRGRSTLQAI 549
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.320 0.134 0.413
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 539,197
Number of Sequences: 2123
Number of extensions: 19042
Number of successful extensions: 35
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 25
Number of HSP's gapped (non-prelim): 11
length of query: 606
length of database: 516,269
effective HSP length: 68
effective length of query: 538
effective length of database: 371,905
effective search space: 200084890
effective search space used: 200084890
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 51 (24.6 bits)
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