Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002359-TA|BGIBMGA002359-PA|IPR007273|SCAMP
(606 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF005037-1|AAB62722.1| 338|Homo sapiens secretory carrier membr... 161 5e-39
CR542286-1|CAG47081.1| 338|Homo sapiens SCAMP1 protein. 159 3e-38
BC034048-1|AAH34048.1| 338|Homo sapiens secretory carrier membr... 159 3e-38
BC015065-1|AAH15065.1| 338|Homo sapiens secretory carrier membr... 159 3e-38
BC004385-1|AAH04385.1| 329|Homo sapiens secretory carrier membr... 148 5e-35
BC001376-1|AAH01376.1| 329|Homo sapiens secretory carrier membr... 148 5e-35
AF005038-1|AAB62723.2| 329|Homo sapiens secretory carrier membr... 148 5e-35
CR456800-1|CAG33081.1| 329|Homo sapiens SCAMP2 protein. 148 6e-35
AF023268-2|AAC51821.1| 347|Homo sapiens propin1 protein. 142 2e-33
CR541757-1|CAG46557.1| 347|Homo sapiens SCAMP3 protein. 142 4e-33
BC005135-1|AAH05135.1| 347|Homo sapiens secretory carrier membr... 141 6e-33
BC000161-1|AAH00161.1| 347|Homo sapiens secretory carrier membr... 141 6e-33
AL713999-26|CAI95095.1| 347|Homo sapiens secretory carrier memb... 141 6e-33
AF005039-1|AAB62724.1| 347|Homo sapiens secretory carrier membr... 141 6e-33
BC010505-1|AAH10505.1| 321|Homo sapiens secretory carrier membr... 129 3e-29
AL713999-27|CAI95096.1| 321|Homo sapiens secretory carrier memb... 129 3e-29
AK074586-1|BAC11075.1| 132|Homo sapiens protein ( Homo sapiens ... 126 2e-28
BC062598-1|AAH62598.1| 229|Homo sapiens secretory carrier membr... 123 2e-27
BC016509-1|AAH16509.1| 229|Homo sapiens secretory carrier membr... 123 2e-27
BC011747-1|AAH11747.1| 229|Homo sapiens secretory carrier membr... 123 2e-27
AK074967-1|BAC11322.1| 229|Homo sapiens protein ( Homo sapiens ... 123 2e-27
BC024700-1|AAH24700.1| 235|Homo sapiens secretory carrier membr... 116 3e-25
AF495715-1|AAM18052.1| 235|Homo sapiens secretory carrier membr... 116 3e-25
AK092056-1|BAC03797.1| 195|Homo sapiens protein ( Homo sapiens ... 105 6e-22
BC009787-1|AAH09787.1| 157|Homo sapiens secretory carrier membr... 103 2e-21
BC036925-1|AAH36925.1| 349|Homo sapiens chromosome 11 open read... 45 7e-04
AK057237-1|BAB71391.1| 349|Homo sapiens protein ( Homo sapiens ... 45 7e-04
BC016355-1|AAH16355.1| 147|Homo sapiens Unknown (protein for IM... 42 0.008
Z69719-2|CAI95605.1| 108|Homo sapiens polymerase (RNA) III (DNA... 32 5.1
DQ431198-2|ABD95903.1| 108|Homo sapiens DNA-directed RNA polyme... 32 5.1
BC011932-1|AAH11932.1| 108|Homo sapiens polymerase (RNA) III (D... 32 5.1
AF126531-1|AAD31424.1| 108|Homo sapiens putative DNA-directed R... 32 5.1
AF060223-1|AAG43123.1| 108|Homo sapiens My010 protein protein. 32 5.1
AF051316-1|AAF18268.1| 108|Homo sapiens RNA polymerase III subu... 32 5.1
AE006462-2|AAK61210.1| 108|Homo sapiens RNA polymerase III subu... 32 5.1
>AF005037-1|AAB62722.1| 338|Homo sapiens secretory carrier membrane
protein protein.
Length = 338
Score = 161 bits (392), Expect = 5e-39
Identities = 107/328 (32%), Positives = 146/328 (44%), Gaps = 15/328 (4%)
Query: 1 MSKFEDNPFSDPTIDNPFADPSVQQVARSTNNATRGLEDYNPFDGXXXXXXXXXXXXXXX 60
MS F+ NPF+DP ++NPF DPSV QV R N GL++YNPF
Sbjct: 1 MSDFDSNPFADPDLNNPFKDPSVTQVTR---NVPPGLDEYNPFSDSRTPPPGGVKMPNVP 57
Query: 61 XXXXXXXVSPPASSQYTRPAQQASAPPPNFTTADFQXXXXXXXXXXXXXXXXXXXXXXGS 120
YT+ A++ + +
Sbjct: 58 NTQPAIMKPTEEHPAYTQIAKEHALAQAEL----LKRQEELERKAAELDRREREMQNLSQ 113
Query: 121 AGRHNNWPPLPGFCPIQPCFYQDINVDIPLEFQRIVRHLYHLWMFYALVLALNIVGGMX- 179
GR NNWPPLP P+ PCFYQD +VDIP+EFQ+ V+ +Y+LWMF+A+ L LNI G +
Sbjct: 114 HGRKNNWPPLPSNFPVGPCFYQDFSVDIPVEFQKTVKLMYYLWMFHAVTLFLNIFGCLAW 173
Query: 180 XXXXXXXXXXXXXXXXYFVLFTPFSFVCWYRPIYKAFRSDSSXXXXXXXXXXXXXXXXTV 239
+F+LFTP SFVCWYRP+Y AFRSDSS V
Sbjct: 174 FCVDSARAVDFGLSILWFLLFTPCSFVCWYRPLYGAFRSDSSFRFFVFFFVYICQFAVHV 233
Query: 240 VQSIGFSDGGSWYLASGCSLAELQYGYKIGKSTLSAIIRQVCQVLWRNLKTMVMSPPTKE 299
+Q+ GF + G+ L S SL L +G + II + + ++VM
Sbjct: 234 LQAAGFHNWGNCGLIS--SLTGLNQNIPVG--IMMIIIAALFTA--SAVISLVMFKKVHG 287
Query: 300 MWKQISAQFENKAYFPNCIGALDGKHVR 327
+++ A FE KA G + K V+
Sbjct: 288 LYRTTGASFE-KAQQEFATGVMSNKTVQ 314
Score = 41.5 bits (93), Expect = 0.008
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 556 VHRIYRSTGASLAKAQAEFTTEILRNQHVQT 586
VH +YR+TGAS KAQ EF T ++ N+ VQT
Sbjct: 285 VHGLYRTTGASFEKAQQEFATGVMSNKTVQT 315
>CR542286-1|CAG47081.1| 338|Homo sapiens SCAMP1 protein.
Length = 338
Score = 159 bits (386), Expect = 3e-38
Identities = 89/251 (35%), Positives = 117/251 (46%), Gaps = 8/251 (3%)
Query: 1 MSKFEDNPFSDPTIDNPFADPSVQQVARSTNNATRGLEDYNPFDGXXXXXXXXXXXXXXX 60
MS F+ NPF+DP ++NPF DPSV QV R N GL++YNPF
Sbjct: 1 MSDFDSNPFADPDLNNPFKDPSVTQVTR---NVPPGLDEYNPFSDSRTPPPGGVKMPNVP 57
Query: 61 XXXXXXXVSPPASSQYTRPAQQASAPPPNFTTADFQXXXXXXXXXXXXXXXXXXXXXXGS 120
YT+ A++ + +
Sbjct: 58 NTQPAIMKPTEEHPAYTQIAKEHALAQAEL----LKRQEELERKAAELDRREREMQNLSQ 113
Query: 121 AGRHNNWPPLPGFCPIQPCFYQDINVDIPLEFQRIVRHLYHLWMFYALVLALNIVGGMX- 179
GR NNWPPLP P+ PCFYQD +VDIP+EFQ+ V+ +Y+LWMF+A+ L LNI G +
Sbjct: 114 HGRKNNWPPLPSNFPVGPCFYQDFSVDIPVEFQKTVKLMYYLWMFHAVTLFLNIFGCLAW 173
Query: 180 XXXXXXXXXXXXXXXXYFVLFTPFSFVCWYRPIYKAFRSDSSXXXXXXXXXXXXXXXXTV 239
+F+LFTP SFVCWYRP+Y AFRSDSS V
Sbjct: 174 FCVDSARAVDFGLSILWFLLFTPCSFVCWYRPLYGAFRSDSSFRFFVFFFVYICQFAVHV 233
Query: 240 VQSIGFSDGGS 250
+Q+ GF + G+
Sbjct: 234 LQAAGFHNWGN 244
Score = 41.5 bits (93), Expect = 0.008
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 556 VHRIYRSTGASLAKAQAEFTTEILRNQHVQT 586
VH +YR+TGAS KAQ EF T ++ N+ VQT
Sbjct: 285 VHGLYRTTGASFEKAQQEFATGVMSNKTVQT 315
>BC034048-1|AAH34048.1| 338|Homo sapiens secretory carrier membrane
protein 1 protein.
Length = 338
Score = 159 bits (386), Expect = 3e-38
Identities = 89/251 (35%), Positives = 117/251 (46%), Gaps = 8/251 (3%)
Query: 1 MSKFEDNPFSDPTIDNPFADPSVQQVARSTNNATRGLEDYNPFDGXXXXXXXXXXXXXXX 60
MS F+ NPF+DP ++NPF DPSV QV R N GL++YNPF
Sbjct: 1 MSDFDSNPFADPDLNNPFKDPSVTQVTR---NVPPGLDEYNPFSDSRTPPPGGVKMPNVP 57
Query: 61 XXXXXXXVSPPASSQYTRPAQQASAPPPNFTTADFQXXXXXXXXXXXXXXXXXXXXXXGS 120
YT+ A++ + +
Sbjct: 58 NTQPAIMKPTEEHPAYTQIAKEHALAQAEL----LKRQEELERKAAELDRREREMQNLSQ 113
Query: 121 AGRHNNWPPLPGFCPIQPCFYQDINVDIPLEFQRIVRHLYHLWMFYALVLALNIVGGMX- 179
GR NNWPPLP P+ PCFYQD +VDIP+EFQ+ V+ +Y+LWMF+A+ L LNI G +
Sbjct: 114 HGRKNNWPPLPSNFPVGPCFYQDFSVDIPVEFQKTVKLMYYLWMFHAVTLFLNIFGCLAW 173
Query: 180 XXXXXXXXXXXXXXXXYFVLFTPFSFVCWYRPIYKAFRSDSSXXXXXXXXXXXXXXXXTV 239
+F+LFTP SFVCWYRP+Y AFRSDSS V
Sbjct: 174 FCVDSARAVDFGLSILWFLLFTPCSFVCWYRPLYGAFRSDSSFRFFVFFFVYICQFAVHV 233
Query: 240 VQSIGFSDGGS 250
+Q+ GF + G+
Sbjct: 234 LQAAGFHNWGN 244
Score = 41.5 bits (93), Expect = 0.008
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 556 VHRIYRSTGASLAKAQAEFTTEILRNQHVQT 586
VH +YR+TGAS KAQ EF T ++ N+ VQT
Sbjct: 285 VHGLYRTTGASFEKAQQEFATGVMSNKTVQT 315
>BC015065-1|AAH15065.1| 338|Homo sapiens secretory carrier membrane
protein 1 protein.
Length = 338
Score = 159 bits (386), Expect = 3e-38
Identities = 89/251 (35%), Positives = 117/251 (46%), Gaps = 8/251 (3%)
Query: 1 MSKFEDNPFSDPTIDNPFADPSVQQVARSTNNATRGLEDYNPFDGXXXXXXXXXXXXXXX 60
MS F+ NPF+DP ++NPF DPSV QV R N GL++YNPF
Sbjct: 1 MSDFDSNPFADPDLNNPFKDPSVTQVTR---NVPPGLDEYNPFSDSRTPPPGGVKMPNVP 57
Query: 61 XXXXXXXVSPPASSQYTRPAQQASAPPPNFTTADFQXXXXXXXXXXXXXXXXXXXXXXGS 120
YT+ A++ + +
Sbjct: 58 NTQPAIMKPTEEHPAYTQIAKEHALAQAEL----LKRQEELERKAAELDRREREMQNLSQ 113
Query: 121 AGRHNNWPPLPGFCPIQPCFYQDINVDIPLEFQRIVRHLYHLWMFYALVLALNIVGGMX- 179
GR NNWPPLP P+ PCFYQD +VDIP+EFQ+ V+ +Y+LWMF+A+ L LNI G +
Sbjct: 114 HGRKNNWPPLPSNFPVGPCFYQDFSVDIPVEFQKTVKLMYYLWMFHAVTLFLNIFGCLAW 173
Query: 180 XXXXXXXXXXXXXXXXYFVLFTPFSFVCWYRPIYKAFRSDSSXXXXXXXXXXXXXXXXTV 239
+F+LFTP SFVCWYRP+Y AFRSDSS V
Sbjct: 174 FCVDSARAVDFGLSILWFLLFTPCSFVCWYRPLYGAFRSDSSFRFFVFFFVYICQFAVHV 233
Query: 240 VQSIGFSDGGS 250
+Q+ GF + G+
Sbjct: 234 LQAAGFHNWGN 244
Score = 41.5 bits (93), Expect = 0.008
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 556 VHRIYRSTGASLAKAQAEFTTEILRNQHVQT 586
VH +YR+TGAS KAQ EF T ++ N+ VQT
Sbjct: 285 VHGLYRTTGASFEKAQQEFATGVMSNKTVQT 315
>BC004385-1|AAH04385.1| 329|Homo sapiens secretory carrier membrane
protein 2 protein.
Length = 329
Score = 148 bits (359), Expect = 5e-35
Identities = 84/257 (32%), Positives = 118/257 (45%), Gaps = 9/257 (3%)
Query: 1 MSKFEDNPFSDPTIDNPFADPSVQQVARSTNNATRGLEDYNPFDGXXXXXXXXXXXXXXX 60
MS F+ NPF+DP NPF DPSV Q+ TN GL ++NPF
Sbjct: 1 MSAFDTNPFADPVDVNPFQDPSVTQL---TNAPQGGLAEFNPFS---ETNAATTVPVTQL 54
Query: 61 XXXXXXXVSPPASSQYTRPAQQASAPPPNFTTADFQXXXXXXXXXXXXXXXXXXXXXXGS 120
V P S + T+P QA Q
Sbjct: 55 PGSSQPAVLQP-SVEPTQPTPQAVVSAAQAGLLRQQEELDRKAAELERKERELQNTVANL 113
Query: 121 AGRHNNWPPLPGFCPIQPCFYQDINVDIPLEFQRIVRHLYHLWMFYALVLALNIVGGMX- 179
R NNWPPLP +CP++PCFYQD + +IP ++QRI + LY+LWM +++ L LN++ +
Sbjct: 114 HVRQNNWPPLPSWCPVKPCFYQDFSTEIPADYQRICKMLYYLWMLHSVTLFLNLLACLAW 173
Query: 180 XXXXXXXXXXXXXXXXYFVLFTPFSFVCWYRPIYKAFRSDSSXXXXXXXXXXXXXXXXTV 239
+F++FTP +F+CWYRPIYKAFRSD+S +
Sbjct: 174 FSGNSSKGVDFGLSILWFLIFTPCAFLCWYRPIYKAFRSDNSFSFFVFFFVFFCQIGIYI 233
Query: 240 VQSIGFSD-GGSWYLAS 255
+Q +G G S ++A+
Sbjct: 234 IQLVGIPGLGDSGWIAA 250
>BC001376-1|AAH01376.1| 329|Homo sapiens secretory carrier membrane
protein 2 protein.
Length = 329
Score = 148 bits (359), Expect = 5e-35
Identities = 84/257 (32%), Positives = 118/257 (45%), Gaps = 9/257 (3%)
Query: 1 MSKFEDNPFSDPTIDNPFADPSVQQVARSTNNATRGLEDYNPFDGXXXXXXXXXXXXXXX 60
MS F+ NPF+DP NPF DPSV Q+ TN GL ++NPF
Sbjct: 1 MSAFDTNPFADPVDVNPFQDPSVTQL---TNAPQGGLAEFNPFS---ETNAATTVPVTQL 54
Query: 61 XXXXXXXVSPPASSQYTRPAQQASAPPPNFTTADFQXXXXXXXXXXXXXXXXXXXXXXGS 120
V P S + T+P QA Q
Sbjct: 55 PGSSQPAVLQP-SVEPTQPTPQAVVSAAQAGLLRQQEELDRKAAELERKERELQNTVANL 113
Query: 121 AGRHNNWPPLPGFCPIQPCFYQDINVDIPLEFQRIVRHLYHLWMFYALVLALNIVGGMX- 179
R NNWPPLP +CP++PCFYQD + +IP ++QRI + LY+LWM +++ L LN++ +
Sbjct: 114 HVRQNNWPPLPSWCPVKPCFYQDFSTEIPADYQRICKMLYYLWMLHSVTLFLNLLACLAW 173
Query: 180 XXXXXXXXXXXXXXXXYFVLFTPFSFVCWYRPIYKAFRSDSSXXXXXXXXXXXXXXXXTV 239
+F++FTP +F+CWYRPIYKAFRSD+S +
Sbjct: 174 FSGNSSKGVDFGLSILWFLIFTPCAFLCWYRPIYKAFRSDNSFSFFVFFFVFFCQIGIYI 233
Query: 240 VQSIGFSD-GGSWYLAS 255
+Q +G G S ++A+
Sbjct: 234 IQLVGIPGLGDSGWIAA 250
>AF005038-1|AAB62723.2| 329|Homo sapiens secretory carrier membrane
protein protein.
Length = 329
Score = 148 bits (359), Expect = 5e-35
Identities = 84/257 (32%), Positives = 118/257 (45%), Gaps = 9/257 (3%)
Query: 1 MSKFEDNPFSDPTIDNPFADPSVQQVARSTNNATRGLEDYNPFDGXXXXXXXXXXXXXXX 60
MS F+ NPF+DP NPF DPSV Q+ TN GL ++NPF
Sbjct: 1 MSAFDTNPFADPVDVNPFQDPSVTQL---TNAPQGGLAEFNPFS---ETNAATTVPVTQL 54
Query: 61 XXXXXXXVSPPASSQYTRPAQQASAPPPNFTTADFQXXXXXXXXXXXXXXXXXXXXXXGS 120
V P S + T+P QA Q
Sbjct: 55 PGSSQPAVLQP-SVEPTQPTPQAVVSAAQAGLLRQQEELDRKAAELERKERELQNTVANL 113
Query: 121 AGRHNNWPPLPGFCPIQPCFYQDINVDIPLEFQRIVRHLYHLWMFYALVLALNIVGGMX- 179
R NNWPPLP +CP++PCFYQD + +IP ++QRI + LY+LWM +++ L LN++ +
Sbjct: 114 HVRQNNWPPLPSWCPVKPCFYQDFSTEIPADYQRICKMLYYLWMLHSVTLFLNLLACLAW 173
Query: 180 XXXXXXXXXXXXXXXXYFVLFTPFSFVCWYRPIYKAFRSDSSXXXXXXXXXXXXXXXXTV 239
+F++FTP +F+CWYRPIYKAFRSD+S +
Sbjct: 174 FSGNSSKGVDFGLSILWFLIFTPCAFLCWYRPIYKAFRSDNSFSFFVFFFVFFCQIGIYI 233
Query: 240 VQSIGFSD-GGSWYLAS 255
+Q +G G S ++A+
Sbjct: 234 IQLVGIPGLGDSGWIAA 250
>CR456800-1|CAG33081.1| 329|Homo sapiens SCAMP2 protein.
Length = 329
Score = 148 bits (358), Expect = 6e-35
Identities = 86/261 (32%), Positives = 117/261 (44%), Gaps = 12/261 (4%)
Query: 1 MSKFEDNPFSDPTIDNPFADPSVQQVARSTNNATRGLEDYNPFDGXXXXXXXXXXXXXXX 60
MS F+ NPF+DP NPF DPSV Q+ TN GL ++NPF
Sbjct: 1 MSAFDTNPFADPVDVNPFQDPSVTQL---TNAPQGGLAEFNPFS---ETNAATTVPVTQL 54
Query: 61 XXXXXXXVSPPASSQYTRPAQQASAPPPNFTTADFQXXXXXXXXXXXXXXXXXXXXXXGS 120
V P S + T+P QA Q
Sbjct: 55 PGSSQPAVLQP-SVEPTQPTPQAVVSAAQAGLLRQQEELDRKAAELERKERELQNTVANL 113
Query: 121 AGRHNNWPPLPGFCPIQPCFYQDINVDIPLEFQRIVRHLYHLWMFYALVLALNIVGGMX- 179
R NNWPPLP +CP++PCFYQD + +IP ++QRI + LY+LWM +++ L LN++ +
Sbjct: 114 HVRQNNWPPLPSWCPVKPCFYQDFSTEIPADYQRICKMLYYLWMLHSVTLFLNLLACLAW 173
Query: 180 XXXXXXXXXXXXXXXXYFVLFTPFSFVCWYRPIYKAFRSDSSXXXXXXXXXXXXXXXXTV 239
+F++FTP +F+CWYRPIYKAFRSD+S +
Sbjct: 174 FSGNSSKGVDFGLSILWFLIFTPCAFLCWYRPIYKAFRSDNSFGFFVFFFVFFCQIGIYI 233
Query: 240 VQSIGFSDGGSWYLASGCSLA 260
+Q +G G SGC A
Sbjct: 234 IQLVGIPGLGD----SGCIAA 250
>AF023268-2|AAC51821.1| 347|Homo sapiens propin1 protein.
Length = 347
Score = 142 bits (345), Expect = 2e-33
Identities = 89/252 (35%), Positives = 113/252 (44%), Gaps = 11/252 (4%)
Query: 7 NPFSDPT-IDNPFADPSVQQVARSTNNATRGLEDYNPFD------GXXXXXXXXXXXXXX 59
NPF++P+ +DNPF DP+V Q S ATR + YNPF+
Sbjct: 9 NPFAEPSELDNPFQDPAVIQHRPSRQYATRDV--YNPFETREPPPAYEPPAPAPLPPPSA 66
Query: 60 XXXXXXXXVSPPASSQYTRPAQQASAPPPNFTTADFQXXXXXXXXXXXXXXXXXXXXXXG 119
+SP Y + QASA Q G
Sbjct: 67 PSLQPSRKLSPTEPKNYGSYSTQASAAAATAELLKKQEELNRKAEELDRRERELQHAALG 126
Query: 120 -SAGRHNNWPPLPGFCPIQPCFYQDINVDIPLEFQRIVRHLYHLWMFYALVLALNIVGGM 178
+A R NNWPPLP FCP+QPCF+QDI+++IP EFQ+ V +Y+LWM L L LN + +
Sbjct: 127 GTATRQNNWPPLPSFCPVQPCFFQDISMEIPQEFQKTVSTMYYLWMCSTLALLLNFLACL 186
Query: 179 XXXXXXXXXXXXXXXXXYFV-LFTPFSFVCWYRPIYKAFRSDSSXXXXXXXXXXXXXXXX 237
+V LFTP SFVCWYRP+YKAFRSDSS
Sbjct: 187 ASFCVETNNGAGFGLSILWVLLFTPCSFVCWYRPMYKAFRSDSSFNFFAFFFNFFDQDVL 246
Query: 238 TVVQSIGFSDGG 249
V+Q+IG G
Sbjct: 247 FVLQAIGIPGWG 258
Score = 35.9 bits (79), Expect = 0.41
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 546 AVEGLRVDFWVHRIYRSTGASLAKAQAEFTTEILRNQHVQT 586
AV G+ + +H +YR TGAS KAQ EF + N V+T
Sbjct: 290 AVLGIVMLKRIHSLYRRTGASFQKAQQEFAAGVFSNPAVRT 330
>CR541757-1|CAG46557.1| 347|Homo sapiens SCAMP3 protein.
Length = 347
Score = 142 bits (343), Expect = 4e-33
Identities = 89/252 (35%), Positives = 113/252 (44%), Gaps = 11/252 (4%)
Query: 7 NPFSDPT-IDNPFADPSVQQVARSTNNATRGLEDYNPFD------GXXXXXXXXXXXXXX 59
NPF++P+ +DNPF DP+V Q S AT L+ YNPF+
Sbjct: 9 NPFAEPSELDNPFQDPAVIQHRPSRQYAT--LDVYNPFETREPPPAYEPPAPAPLPPPSA 66
Query: 60 XXXXXXXXVSPPASSQYTRPAQQASAPPPNFTTADFQXXXXXXXXXXXXXXXXXXXXXXG 119
+SP Y + QASA Q G
Sbjct: 67 PSLQPSRKLSPTEPKNYGSYSTQASAAAATAELLKKQEELNRKAEELDRRERELQHAALG 126
Query: 120 -SAGRHNNWPPLPGFCPIQPCFYQDINVDIPLEFQRIVRHLYHLWMFYALVLALNIVGGM 178
+A R NNWPPLP FCP+QPCF+QDI+++IP EFQ+ V +Y+LWM L L LN + +
Sbjct: 127 GTATRQNNWPPLPSFCPVQPCFFQDISMEIPQEFQKTVSTMYYLWMCSTLALLLNFLACL 186
Query: 179 XXXXXXXXXXXXXXXXXYFV-LFTPFSFVCWYRPIYKAFRSDSSXXXXXXXXXXXXXXXX 237
+V LFTP SFVCWYRP+YKAFRSDSS
Sbjct: 187 ASFCVETNNGAGFGLSILWVLLFTPCSFVCWYRPMYKAFRSDSSFNFFVFFFIFFVQDVL 246
Query: 238 TVVQSIGFSDGG 249
V+Q+IG G
Sbjct: 247 CVLQAIGIPGWG 258
Score = 35.9 bits (79), Expect = 0.41
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 546 AVEGLRVDFWVHRIYRSTGASLAKAQAEFTTEILRNQHVQT 586
AV G+ + +H +YR TGAS KAQ EF + N V+T
Sbjct: 290 AVLGIVMLKRIHSLYRRTGASFQKAQQEFAAGVFSNPAVRT 330
>BC005135-1|AAH05135.1| 347|Homo sapiens secretory carrier membrane
protein 3 protein.
Length = 347
Score = 141 bits (342), Expect = 6e-33
Identities = 89/252 (35%), Positives = 113/252 (44%), Gaps = 11/252 (4%)
Query: 7 NPFSDPT-IDNPFADPSVQQVARSTNNATRGLEDYNPFD------GXXXXXXXXXXXXXX 59
NPF++P+ +DNPF DP+V Q S AT L+ YNPF+
Sbjct: 9 NPFAEPSELDNPFQDPAVIQHRPSRQYAT--LDVYNPFETREPPPAYEPPAPAPLPPPSA 66
Query: 60 XXXXXXXXVSPPASSQYTRPAQQASAPPPNFTTADFQXXXXXXXXXXXXXXXXXXXXXXG 119
+SP Y + QASA Q G
Sbjct: 67 PSLQPSRKLSPTEPKNYGSYSTQASAAAATAELLKKQEELNRKAEELDRRERELQHAALG 126
Query: 120 -SAGRHNNWPPLPGFCPIQPCFYQDINVDIPLEFQRIVRHLYHLWMFYALVLALNIVGGM 178
+A R NNWPPLP FCP+QPCF+QDI+++IP EFQ+ V +Y+LWM L L LN + +
Sbjct: 127 GTATRQNNWPPLPSFCPVQPCFFQDISMEIPQEFQKTVSTMYYLWMCSTLALLLNFLACL 186
Query: 179 XXXXXXXXXXXXXXXXXYFV-LFTPFSFVCWYRPIYKAFRSDSSXXXXXXXXXXXXXXXX 237
+V LFTP SFVCWYRP+YKAFRSDSS
Sbjct: 187 ASFCVETNNGAGFGLSILWVLLFTPCSFVCWYRPMYKAFRSDSSFNFFVFFFIFFVQDVL 246
Query: 238 TVVQSIGFSDGG 249
V+Q+IG G
Sbjct: 247 FVLQAIGIPGWG 258
Score = 35.9 bits (79), Expect = 0.41
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 546 AVEGLRVDFWVHRIYRSTGASLAKAQAEFTTEILRNQHVQT 586
AV G+ + +H +YR TGAS KAQ EF + N V+T
Sbjct: 290 AVLGIVMLKRIHSLYRRTGASFQKAQQEFAAGVFSNPAVRT 330
>BC000161-1|AAH00161.1| 347|Homo sapiens secretory carrier membrane
protein 3 protein.
Length = 347
Score = 141 bits (342), Expect = 6e-33
Identities = 89/252 (35%), Positives = 113/252 (44%), Gaps = 11/252 (4%)
Query: 7 NPFSDPT-IDNPFADPSVQQVARSTNNATRGLEDYNPFD------GXXXXXXXXXXXXXX 59
NPF++P+ +DNPF DP+V Q S AT L+ YNPF+
Sbjct: 9 NPFAEPSELDNPFQDPAVIQHRPSRQYAT--LDVYNPFETREPPPAYEPPAPAPLPPPSA 66
Query: 60 XXXXXXXXVSPPASSQYTRPAQQASAPPPNFTTADFQXXXXXXXXXXXXXXXXXXXXXXG 119
+SP Y + QASA Q G
Sbjct: 67 PSLQPSRKLSPTEPKNYGSYSTQASAAAATAELLKKQEELNRKAEELDRRERELQHAALG 126
Query: 120 -SAGRHNNWPPLPGFCPIQPCFYQDINVDIPLEFQRIVRHLYHLWMFYALVLALNIVGGM 178
+A R NNWPPLP FCP+QPCF+QDI+++IP EFQ+ V +Y+LWM L L LN + +
Sbjct: 127 GTATRQNNWPPLPSFCPVQPCFFQDISMEIPQEFQKTVSTMYYLWMCSTLALLLNFLACL 186
Query: 179 XXXXXXXXXXXXXXXXXYFV-LFTPFSFVCWYRPIYKAFRSDSSXXXXXXXXXXXXXXXX 237
+V LFTP SFVCWYRP+YKAFRSDSS
Sbjct: 187 ASFCVETNNGAGFGLSILWVLLFTPCSFVCWYRPMYKAFRSDSSFNFFVFFFIFFVQDVL 246
Query: 238 TVVQSIGFSDGG 249
V+Q+IG G
Sbjct: 247 FVLQAIGIPGWG 258
Score = 35.9 bits (79), Expect = 0.41
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 546 AVEGLRVDFWVHRIYRSTGASLAKAQAEFTTEILRNQHVQT 586
AV G+ + +H +YR TGAS KAQ EF + N V+T
Sbjct: 290 AVLGIVMLKRIHSLYRRTGASFQKAQQEFAAGVFSNPAVRT 330
>AL713999-26|CAI95095.1| 347|Homo sapiens secretory carrier
membrane protein 3 protein.
Length = 347
Score = 141 bits (342), Expect = 6e-33
Identities = 89/252 (35%), Positives = 113/252 (44%), Gaps = 11/252 (4%)
Query: 7 NPFSDPT-IDNPFADPSVQQVARSTNNATRGLEDYNPFD------GXXXXXXXXXXXXXX 59
NPF++P+ +DNPF DP+V Q S AT L+ YNPF+
Sbjct: 9 NPFAEPSELDNPFQDPAVIQHRPSRQYAT--LDVYNPFETREPPPAYEPPAPAPLPPPSA 66
Query: 60 XXXXXXXXVSPPASSQYTRPAQQASAPPPNFTTADFQXXXXXXXXXXXXXXXXXXXXXXG 119
+SP Y + QASA Q G
Sbjct: 67 PSLQPSRKLSPTEPKNYGSYSTQASAAAATAELLKKQEELNRKAEELDRRERELQHAALG 126
Query: 120 -SAGRHNNWPPLPGFCPIQPCFYQDINVDIPLEFQRIVRHLYHLWMFYALVLALNIVGGM 178
+A R NNWPPLP FCP+QPCF+QDI+++IP EFQ+ V +Y+LWM L L LN + +
Sbjct: 127 GTATRQNNWPPLPSFCPVQPCFFQDISMEIPQEFQKTVSTMYYLWMCSTLALLLNFLACL 186
Query: 179 XXXXXXXXXXXXXXXXXYFV-LFTPFSFVCWYRPIYKAFRSDSSXXXXXXXXXXXXXXXX 237
+V LFTP SFVCWYRP+YKAFRSDSS
Sbjct: 187 ASFCVETNNGAGFGLSILWVLLFTPCSFVCWYRPMYKAFRSDSSFNFFVFFFIFFVQDVL 246
Query: 238 TVVQSIGFSDGG 249
V+Q+IG G
Sbjct: 247 FVLQAIGIPGWG 258
Score = 35.9 bits (79), Expect = 0.41
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 546 AVEGLRVDFWVHRIYRSTGASLAKAQAEFTTEILRNQHVQT 586
AV G+ + +H +YR TGAS KAQ EF + N V+T
Sbjct: 290 AVLGIVMLKRIHSLYRRTGASFQKAQQEFAAGVFSNPAVRT 330
>AF005039-1|AAB62724.1| 347|Homo sapiens secretory carrier membrane
protein protein.
Length = 347
Score = 141 bits (342), Expect = 6e-33
Identities = 89/252 (35%), Positives = 113/252 (44%), Gaps = 11/252 (4%)
Query: 7 NPFSDPT-IDNPFADPSVQQVARSTNNATRGLEDYNPFD------GXXXXXXXXXXXXXX 59
NPF++P+ +DNPF DP+V Q S AT L+ YNPF+
Sbjct: 9 NPFAEPSELDNPFQDPAVIQHRPSRQYAT--LDVYNPFETREPPPAYEPPAPAPLPPPSA 66
Query: 60 XXXXXXXXVSPPASSQYTRPAQQASAPPPNFTTADFQXXXXXXXXXXXXXXXXXXXXXXG 119
+SP Y + QASA Q G
Sbjct: 67 PSLQPSRMLSPTEPKNYGSYSTQASAAAATAELLKKQEELNRKAEELDRRERELQHAALG 126
Query: 120 -SAGRHNNWPPLPGFCPIQPCFYQDINVDIPLEFQRIVRHLYHLWMFYALVLALNIVGGM 178
+A R NNWPPLP FCP+QPCF+QDI+++IP EFQ+ V +Y+LWM L L LN + +
Sbjct: 127 GTATRQNNWPPLPSFCPVQPCFFQDISMEIPQEFQKTVSTMYYLWMCSTLALLLNFLACL 186
Query: 179 XXXXXXXXXXXXXXXXXYFV-LFTPFSFVCWYRPIYKAFRSDSSXXXXXXXXXXXXXXXX 237
+V LFTP SFVCWYRP+YKAFRSDSS
Sbjct: 187 ASFCVETNNGAGFGLSILWVLLFTPCSFVCWYRPMYKAFRSDSSFNFFVFFFIFFVQDVL 246
Query: 238 TVVQSIGFSDGG 249
V+Q+IG G
Sbjct: 247 FVLQAIGIPGWG 258
Score = 35.9 bits (79), Expect = 0.41
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 546 AVEGLRVDFWVHRIYRSTGASLAKAQAEFTTEILRNQHVQT 586
AV G+ + +H +YR TGAS KAQ EF + N V+T
Sbjct: 290 AVLGIVMLKRIHSLYRRTGASFQKAQQEFAAGVFSNPAVRT 330
>BC010505-1|AAH10505.1| 321|Homo sapiens secretory carrier membrane
protein 3 protein.
Length = 321
Score = 129 bits (311), Expect = 3e-29
Identities = 61/132 (46%), Positives = 76/132 (57%), Gaps = 1/132 (0%)
Query: 119 GSAGRHNNWPPLPGFCPIQPCFYQDINVDIPLEFQRIVRHLYHLWMFYALVLALNIVGGM 178
G+A R NNWPPLP FCP+QPCF+QDI+++IP EFQ+ V +Y+LWM L L LN + +
Sbjct: 101 GTATRQNNWPPLPSFCPVQPCFFQDISMEIPQEFQKTVSTMYYLWMCSTLALLLNFLACL 160
Query: 179 XXXXXXXXXXXXXXXXXYFV-LFTPFSFVCWYRPIYKAFRSDSSXXXXXXXXXXXXXXXX 237
+V LFTP SFVCWYRP+YKAFRSDSS
Sbjct: 161 ASFCVETNNGAGFGLSILWVLLFTPCSFVCWYRPMYKAFRSDSSFNFFVFFFIFFVQDVL 220
Query: 238 TVVQSIGFSDGG 249
V+Q+IG G
Sbjct: 221 FVLQAIGIPGWG 232
Score = 35.9 bits (79), Expect = 0.41
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 546 AVEGLRVDFWVHRIYRSTGASLAKAQAEFTTEILRNQHVQT 586
AV G+ + +H +YR TGAS KAQ EF + N V+T
Sbjct: 264 AVLGIVMLKRIHSLYRRTGASFQKAQQEFAAGVFSNPAVRT 304
>AL713999-27|CAI95096.1| 321|Homo sapiens secretory carrier
membrane protein 3 protein.
Length = 321
Score = 129 bits (311), Expect = 3e-29
Identities = 61/132 (46%), Positives = 76/132 (57%), Gaps = 1/132 (0%)
Query: 119 GSAGRHNNWPPLPGFCPIQPCFYQDINVDIPLEFQRIVRHLYHLWMFYALVLALNIVGGM 178
G+A R NNWPPLP FCP+QPCF+QDI+++IP EFQ+ V +Y+LWM L L LN + +
Sbjct: 101 GTATRQNNWPPLPSFCPVQPCFFQDISMEIPQEFQKTVSTMYYLWMCSTLALLLNFLACL 160
Query: 179 XXXXXXXXXXXXXXXXXYFV-LFTPFSFVCWYRPIYKAFRSDSSXXXXXXXXXXXXXXXX 237
+V LFTP SFVCWYRP+YKAFRSDSS
Sbjct: 161 ASFCVETNNGAGFGLSILWVLLFTPCSFVCWYRPMYKAFRSDSSFNFFVFFFIFFVQDVL 220
Query: 238 TVVQSIGFSDGG 249
V+Q+IG G
Sbjct: 221 FVLQAIGIPGWG 232
Score = 35.9 bits (79), Expect = 0.41
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 546 AVEGLRVDFWVHRIYRSTGASLAKAQAEFTTEILRNQHVQT 586
AV G+ + +H +YR TGAS KAQ EF + N V+T
Sbjct: 264 AVLGIVMLKRIHSLYRRTGASFQKAQQEFAAGVFSNPAVRT 304
>AK074586-1|BAC11075.1| 132|Homo sapiens protein ( Homo sapiens
cDNA FLJ90105 fis, clone HEMBA1006357, highly similar to
Secretory carrier membrane protein 4. ).
Length = 132
Score = 126 bits (305), Expect = 2e-28
Identities = 52/129 (40%), Positives = 76/129 (58%)
Query: 123 RHNNWPPLPGFCPIQPCFYQDINVDIPLEFQRIVRHLYHLWMFYALVLALNIVGGMXXXX 182
+ NN+PPLP F P++PCFYQ+ + +IP+E Q +V+ +Y LWMFY L +N++ +
Sbjct: 4 KENNFPPLPKFIPVKPCFYQNFSDEIPVEHQVLVKRIYRLWMFYCATLGVNLIACLAWWI 63
Query: 183 XXXXXXXXXXXXXYFVLFTPFSFVCWYRPIYKAFRSDSSXXXXXXXXXXXXXXXXTVVQS 242
+ +LFTP +VCW+RP+YKAFR+DSS TV+Q+
Sbjct: 64 GGGSGTNFGLAFVWLLLFTPCGYVCWFRPVYKAFRADSSFNFMAFFFIFGARFVLTVIQA 123
Query: 243 IGFSDGGSW 251
IGFS G+W
Sbjct: 124 IGFSGWGAW 132
>BC062598-1|AAH62598.1| 229|Homo sapiens secretory carrier membrane
protein 4 protein.
Length = 229
Score = 123 bits (297), Expect = 2e-27
Identities = 54/136 (39%), Positives = 78/136 (57%), Gaps = 2/136 (1%)
Query: 123 RHNNWPPLPGFCPIQPCFYQDINVDIPLEFQRIVRHLYHLWMFYALVLALNIVGGMXXXX 182
+ NN+PPLP F P++PCFYQ+ + +IP+E Q +V+ +Y LWMFY L +N++ +
Sbjct: 4 KENNFPPLPKFIPVKPCFYQNFSDEIPVEHQVLVKRIYRLWMFYCATLGVNLIACLAWWI 63
Query: 183 XXXXXXXXXXXXXYFVLFTPFSFVCWYRPIYKAFRSDSSXXXXXXXXXXXXXXXXTVVQS 242
+ +LFTP +VCW+RP+YKAFR+DSS TV+Q+
Sbjct: 64 GGGSGTNFGLAFVWLLLFTPCGYVCWFRPVYKAFRADSSFNFMAFFFIFGAQFVLTVIQA 123
Query: 243 IGFSDGGS--WYLASG 256
IGFS G+ W A G
Sbjct: 124 IGFSGWGACGWLSAIG 139
Score = 33.5 bits (73), Expect = 2.2
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 556 VHRIYRSTGASLAKAQAEFTTEILRN 581
VHRIYR G S KAQ E+ T RN
Sbjct: 172 VHRIYRGAGGSFQKAQTEWNTGTWRN 197
>BC016509-1|AAH16509.1| 229|Homo sapiens secretory carrier membrane
protein 4 protein.
Length = 229
Score = 123 bits (297), Expect = 2e-27
Identities = 54/136 (39%), Positives = 78/136 (57%), Gaps = 2/136 (1%)
Query: 123 RHNNWPPLPGFCPIQPCFYQDINVDIPLEFQRIVRHLYHLWMFYALVLALNIVGGMXXXX 182
+ NN+PPLP F P++PCFYQ+ + +IP+E Q +V+ +Y LWMFY L +N++ +
Sbjct: 4 KENNFPPLPKFIPVKPCFYQNFSDEIPVEHQVLVKRIYRLWMFYCATLGVNLIACLAWWI 63
Query: 183 XXXXXXXXXXXXXYFVLFTPFSFVCWYRPIYKAFRSDSSXXXXXXXXXXXXXXXXTVVQS 242
+ +LFTP +VCW+RP+YKAFR+DSS TV+Q+
Sbjct: 64 GGGSGTNFGLAFVWLLLFTPCGYVCWFRPVYKAFRADSSFNFMAFFFIFGAQFVLTVIQA 123
Query: 243 IGFSDGGS--WYLASG 256
IGFS G+ W A G
Sbjct: 124 IGFSGWGACGWLSAIG 139
Score = 33.5 bits (73), Expect = 2.2
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 556 VHRIYRSTGASLAKAQAEFTTEILRN 581
VHRIYR G S KAQ E+ T RN
Sbjct: 172 VHRIYRGAGGSFQKAQTEWNTGTWRN 197
>BC011747-1|AAH11747.1| 229|Homo sapiens secretory carrier membrane
protein 4 protein.
Length = 229
Score = 123 bits (297), Expect = 2e-27
Identities = 54/136 (39%), Positives = 78/136 (57%), Gaps = 2/136 (1%)
Query: 123 RHNNWPPLPGFCPIQPCFYQDINVDIPLEFQRIVRHLYHLWMFYALVLALNIVGGMXXXX 182
+ NN+PPLP F P++PCFYQ+ + +IP+E Q +V+ +Y LWMFY L +N++ +
Sbjct: 4 KENNFPPLPKFIPVKPCFYQNFSDEIPVEHQVLVKRIYRLWMFYCATLGVNLIACLAWWI 63
Query: 183 XXXXXXXXXXXXXYFVLFTPFSFVCWYRPIYKAFRSDSSXXXXXXXXXXXXXXXXTVVQS 242
+ +LFTP +VCW+RP+YKAFR+DSS TV+Q+
Sbjct: 64 GGGSGTNFGLAFVWLLLFTPCGYVCWFRPVYKAFRADSSFNFMAFFFIFGAQFVLTVIQA 123
Query: 243 IGFSDGGS--WYLASG 256
IGFS G+ W A G
Sbjct: 124 IGFSGWGACGWLSAIG 139
Score = 33.5 bits (73), Expect = 2.2
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 556 VHRIYRSTGASLAKAQAEFTTEILRN 581
VHRIYR G S KAQ E+ T RN
Sbjct: 172 VHRIYRGAGGSFQKAQTEWNTGTWRN 197
>AK074967-1|BAC11322.1| 229|Homo sapiens protein ( Homo sapiens
cDNA FLJ90486 fis, clone NT2RP3003354, highly similar to
Secretory carrier membrane protein 4. ).
Length = 229
Score = 123 bits (297), Expect = 2e-27
Identities = 54/136 (39%), Positives = 78/136 (57%), Gaps = 2/136 (1%)
Query: 123 RHNNWPPLPGFCPIQPCFYQDINVDIPLEFQRIVRHLYHLWMFYALVLALNIVGGMXXXX 182
+ NN+PPLP F P++PCFYQ+ + +IP+E Q +V+ +Y LWMFY L +N++ +
Sbjct: 4 KENNFPPLPKFIPVKPCFYQNFSDEIPVEHQVLVKRIYRLWMFYCATLGVNLIACLAWWI 63
Query: 183 XXXXXXXXXXXXXYFVLFTPFSFVCWYRPIYKAFRSDSSXXXXXXXXXXXXXXXXTVVQS 242
+ +LFTP +VCW+RP+YKAFR+DSS TV+Q+
Sbjct: 64 GGGSGTNFGLAFVWLLLFTPCGYVCWFRPVYKAFRADSSFNFMAFFFIFGAQFVLTVIQA 123
Query: 243 IGFSDGGS--WYLASG 256
IGFS G+ W A G
Sbjct: 124 IGFSGWGACGWLSAIG 139
Score = 33.5 bits (73), Expect = 2.2
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 556 VHRIYRSTGASLAKAQAEFTTEILRN 581
VHRIYR G S KAQ E+ T RN
Sbjct: 172 VHRIYRGAGGSFQKAQTEWNTGTWRN 197
>BC024700-1|AAH24700.1| 235|Homo sapiens secretory carrier membrane
protein 5 protein.
Length = 235
Score = 116 bits (278), Expect = 3e-25
Identities = 49/129 (37%), Positives = 73/129 (56%)
Query: 121 AGRHNNWPPLPGFCPIQPCFYQDINVDIPLEFQRIVRHLYHLWMFYALVLALNIVGGMXX 180
A + NN+PPLP F P++PCFYQD DIP + + + LY+LWM ++ LA+N+VG +
Sbjct: 2 AEKVNNFPPLPKFIPLKPCFYQDFEADIPPQHVSMTKRLYYLWMLNSVTLAVNLVGCLAW 61
Query: 181 XXXXXXXXXXXXXXXYFVLFTPFSFVCWYRPIYKAFRSDSSXXXXXXXXXXXXXXXXTVV 240
+ +LFTP S+VCW+RPIYKAF++DSS +++
Sbjct: 62 LIGGGGATNFGLAFLWLILFTPCSYVCWFRPIYKAFKTDSSFSFMAFFFTFMAQLVISII 121
Query: 241 QSIGFSDGG 249
Q++G G
Sbjct: 122 QAVGIPGWG 130
Score = 38.7 bits (86), Expect = 0.059
Identities = 16/30 (53%), Positives = 21/30 (70%)
Query: 556 VHRIYRSTGASLAKAQAEFTTEILRNQHVQ 585
VH+ YR +G S +KAQ E+TT +N HVQ
Sbjct: 172 VHKFYRGSGGSFSKAQEEWTTGAWKNPHVQ 201
>AF495715-1|AAM18052.1| 235|Homo sapiens secretory carrier membrane
protein 5 protein.
Length = 235
Score = 116 bits (278), Expect = 3e-25
Identities = 49/129 (37%), Positives = 73/129 (56%)
Query: 121 AGRHNNWPPLPGFCPIQPCFYQDINVDIPLEFQRIVRHLYHLWMFYALVLALNIVGGMXX 180
A + NN+PPLP F P++PCFYQD DIP + + + LY+LWM ++ LA+N+VG +
Sbjct: 2 AEKVNNFPPLPKFIPLKPCFYQDFEADIPPQHVSMTKRLYYLWMLNSVTLAVNLVGCLAW 61
Query: 181 XXXXXXXXXXXXXXXYFVLFTPFSFVCWYRPIYKAFRSDSSXXXXXXXXXXXXXXXXTVV 240
+ +LFTP S+VCW+RPIYKAF++DSS +++
Sbjct: 62 LIGGGGATNFGLAFLWLILFTPCSYVCWFRPIYKAFKTDSSFSFMAFFFTFMAQLVISII 121
Query: 241 QSIGFSDGG 249
Q++G G
Sbjct: 122 QAVGIPGWG 130
Score = 38.7 bits (86), Expect = 0.059
Identities = 16/30 (53%), Positives = 21/30 (70%)
Query: 556 VHRIYRSTGASLAKAQAEFTTEILRNQHVQ 585
VH+ YR +G S +KAQ E+TT +N HVQ
Sbjct: 172 VHKFYRGSGGSFSKAQEEWTTGAWKNPHVQ 201
>AK092056-1|BAC03797.1| 195|Homo sapiens protein ( Homo sapiens
cDNA FLJ34737 fis, clone MESAN2008415, moderately
similar to Mus musculus secretory carrier membrane
protein 4 mRNA. ).
Length = 195
Score = 105 bits (251), Expect = 6e-22
Identities = 40/95 (42%), Positives = 60/95 (63%)
Query: 123 RHNNWPPLPGFCPIQPCFYQDINVDIPLEFQRIVRHLYHLWMFYALVLALNIVGGMXXXX 182
+ NN+PPLP F P++PCFYQ+ + +IP+E Q +V+ +Y LWMFY L +N++ +
Sbjct: 4 KENNFPPLPKFIPVKPCFYQNFSDEIPVEHQVLVKRIYRLWMFYCATLGVNLIACLAWWI 63
Query: 183 XXXXXXXXXXXXXYFVLFTPFSFVCWYRPIYKAFR 217
+ +LFTP +VCW+RP+YKAFR
Sbjct: 64 GGGSGTNFGLAFVWLLLFTPCGYVCWFRPVYKAFR 98
Score = 33.5 bits (73), Expect = 2.2
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 556 VHRIYRSTGASLAKAQAEFTTEILRN 581
VHRIYR G S KAQ E+ T RN
Sbjct: 138 VHRIYRGAGGSFQKAQTEWNTGTWRN 163
>BC009787-1|AAH09787.1| 157|Homo sapiens secretory carrier membrane
protein 1 protein.
Length = 157
Score = 103 bits (246), Expect = 2e-21
Identities = 56/164 (34%), Positives = 74/164 (45%), Gaps = 7/164 (4%)
Query: 1 MSKFEDNPFSDPTIDNPFADPSVQQVARSTNNATRGLEDYNPFDGXXXXXXXXXXXXXXX 60
MS F+ NPF+DP ++NPF DPSV QV R N GL++YNPF
Sbjct: 1 MSDFDSNPFADPDLNNPFKDPSVTQVTR---NVPPGLDEYNPFSDSRTPPPGGVKMPNVP 57
Query: 61 XXXXXXXVSPPASSQYTRPAQQASAPPPNFTTADFQXXXXXXXXXXXXXXXXXXXXXXGS 120
YT+ A++ + +
Sbjct: 58 NTQPAIMKPTEEHPAYTQIAKEHALAQAEL----LKRQEELERKAAELDRREREMQNLSQ 113
Query: 121 AGRHNNWPPLPGFCPIQPCFYQDINVDIPLEFQRIVRHLYHLWM 164
GR NNWPPLP P+ PCFYQD +VDIP+EFQ+ V+ +Y+LWM
Sbjct: 114 HGRKNNWPPLPSNFPVGPCFYQDFSVDIPVEFQKTVKLMYYLWM 157
>BC036925-1|AAH36925.1| 349|Homo sapiens chromosome 11 open reading
frame 77 protein.
Length = 349
Score = 45.2 bits (102), Expect = 7e-04
Identities = 32/143 (22%), Positives = 59/143 (41%), Gaps = 7/143 (4%)
Query: 239 VVQSIGFSDGGSWYLASGCSLAELQYGYKIGKSTLSAIIRQVCQVLWRNLKTMVMSPPTK 298
V+ ++GF GS+ G ++ I ++++S + V + L + P +
Sbjct: 73 VLAALGFYTSGSFQTRMGDAIG-------ISQASMSRCVANVTEALVERASQFIRFPADE 125
Query: 299 EMWKQISAQFENKAYFPNCIGALDGKHVRLIQPPESGSMYYNYKHFFSLVLMALCDANYC 358
+ + +F A P +G +D HV + P Y N K SL + +CD
Sbjct: 126 ASIQALKDEFYGLAGMPGVMGVVDCIHVAIKAPNAEDLSYVNRKGLHSLNCLMVCDIRGT 185
Query: 359 FIWVDVGAYGKDSDSGVFKETSL 381
+ V+ G D V +++SL
Sbjct: 186 LMTVETNWPGSLQDCAVLQQSSL 208
>AK057237-1|BAB71391.1| 349|Homo sapiens protein ( Homo sapiens
cDNA FLJ32675 fis, clone TESTI1000163. ).
Length = 349
Score = 45.2 bits (102), Expect = 7e-04
Identities = 32/143 (22%), Positives = 59/143 (41%), Gaps = 7/143 (4%)
Query: 239 VVQSIGFSDGGSWYLASGCSLAELQYGYKIGKSTLSAIIRQVCQVLWRNLKTMVMSPPTK 298
V+ ++GF GS+ G ++ I ++++S + V + L + P +
Sbjct: 73 VLAALGFYTSGSFQTRMGDAIG-------ISQASMSRCVANVTEALVERASQFIRFPADE 125
Query: 299 EMWKQISAQFENKAYFPNCIGALDGKHVRLIQPPESGSMYYNYKHFFSLVLMALCDANYC 358
+ + +F A P +G +D HV + P Y N K SL + +CD
Sbjct: 126 ASIQALKDEFYGLAGMPGVMGVVDCIHVAIKAPNAEDLSYVNRKGLHSLNCLMVCDIRGT 185
Query: 359 FIWVDVGAYGKDSDSGVFKETSL 381
+ V+ G D V +++SL
Sbjct: 186 LMTVETNWPGSLQDCAVLQQSSL 208
>BC016355-1|AAH16355.1| 147|Homo sapiens Unknown (protein for
IMAGE:4092501) protein.
Length = 147
Score = 41.5 bits (93), Expect = 0.008
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 556 VHRIYRSTGASLAKAQAEFTTEILRNQHVQT 586
VH +YR+TGAS KAQ EF T ++ N+ VQT
Sbjct: 94 VHGLYRTTGASFEKAQQEFATGVMSNKTVQT 124
>Z69719-2|CAI95605.1| 108|Homo sapiens polymerase (RNA) III (DNA
directed) polypeptide K, 12.3 kDa protein.
Length = 108
Score = 32.3 bits (70), Expect = 5.1
Identities = 13/42 (30%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 449 SCPSCQNVTKRITNCNTPIHKRPDLNDTVNASSSFTSYDSTA 490
+CP N+T+++TN P K +++D + ++++ + DSTA
Sbjct: 27 TCPYVHNITRKVTNRKYP--KLKEVDDVLGGAAAWENVDSTA 66
>DQ431198-2|ABD95903.1| 108|Homo sapiens DNA-directed RNA
polymerases III 12.5 kDa polypeptide protein.
Length = 108
Score = 32.3 bits (70), Expect = 5.1
Identities = 13/42 (30%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 449 SCPSCQNVTKRITNCNTPIHKRPDLNDTVNASSSFTSYDSTA 490
+CP N+T+++TN P K +++D + ++++ + DSTA
Sbjct: 27 TCPYVHNITRKVTNRKYP--KLKEVDDVLGGAAAWENVDSTA 66
>BC011932-1|AAH11932.1| 108|Homo sapiens polymerase (RNA) III (DNA
directed) polypeptide K, 12.3 kDa protein.
Length = 108
Score = 32.3 bits (70), Expect = 5.1
Identities = 13/42 (30%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 449 SCPSCQNVTKRITNCNTPIHKRPDLNDTVNASSSFTSYDSTA 490
+CP N+T+++TN P K +++D + ++++ + DSTA
Sbjct: 27 TCPYVHNITRKVTNRKYP--KLKEVDDVLGGAAAWENVDSTA 66
>AF126531-1|AAD31424.1| 108|Homo sapiens putative DNA-directed RNA
polymerase III C11 subunit protein.
Length = 108
Score = 32.3 bits (70), Expect = 5.1
Identities = 13/42 (30%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 449 SCPSCQNVTKRITNCNTPIHKRPDLNDTVNASSSFTSYDSTA 490
+CP N+T+++TN P K +++D + ++++ + DSTA
Sbjct: 27 TCPYVHNITRKVTNRKYP--KLKEVDDVLGGAAAWENVDSTA 66
>AF060223-1|AAG43123.1| 108|Homo sapiens My010 protein protein.
Length = 108
Score = 32.3 bits (70), Expect = 5.1
Identities = 13/42 (30%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 449 SCPSCQNVTKRITNCNTPIHKRPDLNDTVNASSSFTSYDSTA 490
+CP N+T+++TN P K +++D + ++++ + DSTA
Sbjct: 27 TCPYVHNITRKVTNRKYP--KLKEVDDVLGGAAAWENVDSTA 66
>AF051316-1|AAF18268.1| 108|Homo sapiens RNA polymerase III subunit
protein.
Length = 108
Score = 32.3 bits (70), Expect = 5.1
Identities = 13/42 (30%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 449 SCPSCQNVTKRITNCNTPIHKRPDLNDTVNASSSFTSYDSTA 490
+CP N+T+++TN P K +++D + ++++ + DSTA
Sbjct: 27 TCPYVHNITRKVTNRKYP--KLKEVDDVLGGAAAWENVDSTA 66
>AE006462-2|AAK61210.1| 108|Homo sapiens RNA polymerase III subunit
CII protein.
Length = 108
Score = 32.3 bits (70), Expect = 5.1
Identities = 13/42 (30%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 449 SCPSCQNVTKRITNCNTPIHKRPDLNDTVNASSSFTSYDSTA 490
+CP N+T+++TN P K +++D + ++++ + DSTA
Sbjct: 27 TCPYVHNITRKVTNRKYP--KLKEVDDVLGGAAAWENVDSTA 66
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.320 0.134 0.413
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,042,903
Number of Sequences: 224733
Number of extensions: 2763225
Number of successful extensions: 5439
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 5336
Number of HSP's gapped (non-prelim): 79
length of query: 606
length of database: 73,234,838
effective HSP length: 94
effective length of query: 512
effective length of database: 52,109,936
effective search space: 26680287232
effective search space used: 26680287232
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 68 (31.5 bits)
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