GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002358-TA|BGIBMGA002358-PA|undefined
         (54 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q1ITH5 Cluster: Glycogen/starch/alpha-glucan phosphoryl...    33   1.5  

>UniRef50_Q1ITH5 Cluster: Glycogen/starch/alpha-glucan
           phosphorylase; n=1; Acidobacteria bacterium
           Ellin345|Rep: Glycogen/starch/alpha-glucan phosphorylase
           - Acidobacteria bacterium (strain Ellin345)
          Length = 842

 Score = 32.7 bits (71), Expect = 1.5
 Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 2/55 (3%)

Query: 1   MIDDREHCAKCQYQ-FNR-VRDVIRQRWTVAKRLAGAKSRMLVEKQDPAYFIQRS 53
           ++D RE  A+ Q++ F R VRDV+ QRW + +++ G ++   +      + I RS
Sbjct: 55  VLDKRESTARDQFEAFARSVRDVLSQRWVLTEQIYGRQNAKRIYYVSMEFLIGRS 109


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.328    0.135    0.417 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,562,539
Number of Sequences: 1657284
Number of extensions: 1281140
Number of successful extensions: 3610
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 3610
Number of HSP's gapped (non-prelim): 1
length of query: 54
length of database: 575,637,011
effective HSP length: 34
effective length of query: 20
effective length of database: 519,289,355
effective search space: 10385787100
effective search space used: 10385787100
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 65 (30.3 bits)