GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002358-TA|BGIBMGA002358-PA|undefined
         (54 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    19   4.0  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    19   4.0  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      19   5.2  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      19   5.2  

>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 19.0 bits (37), Expect = 4.0
 Identities = 9/47 (19%), Positives = 18/47 (38%)

Query: 5   REHCAKCQYQFNRVRDVIRQRWTVAKRLAGAKSRMLVEKQDPAYFIQ 51
           R+H    ++     R  +  +  V KR+   K+  +    D  Y  +
Sbjct: 386 RQHAVTAKFPIYLYRISVETKLNVFKRIGNIKAPGVCHGDDIGYLFK 432


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 19.0 bits (37), Expect = 4.0
 Identities = 9/47 (19%), Positives = 18/47 (38%)

Query: 5   REHCAKCQYQFNRVRDVIRQRWTVAKRLAGAKSRMLVEKQDPAYFIQ 51
           R+H    ++     R  +  +  V KR+   K+  +    D  Y  +
Sbjct: 388 RQHAVTAKFPIYLYRMSVETKLNVFKRIGNIKAPGVCHGDDIGYLFK 434


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 18.6 bits (36), Expect = 5.2
 Identities = 9/47 (19%), Positives = 18/47 (38%)

Query: 5   REHCAKCQYQFNRVRDVIRQRWTVAKRLAGAKSRMLVEKQDPAYFIQ 51
           R+H    ++     R  +  +  V KR+   K+  +    D  Y  +
Sbjct: 386 RQHAITAKFPIYLYRMSVETKLNVFKRIGNIKAPGVCHGDDIGYLFK 432


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 18.6 bits (36), Expect = 5.2
 Identities = 9/47 (19%), Positives = 18/47 (38%)

Query: 5   REHCAKCQYQFNRVRDVIRQRWTVAKRLAGAKSRMLVEKQDPAYFIQ 51
           R+H    ++     R  +  +  V KR+   K+  +    D  Y  +
Sbjct: 388 RQHAITAKFPIYLYRMSVETKLNVFKRIGNIKAPGVCHGDDIGYLFK 434


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.328    0.135    0.417 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,112
Number of Sequences: 317
Number of extensions: 270
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 54
length of database: 114,650
effective HSP length: 34
effective length of query: 20
effective length of database: 103,872
effective search space:  2077440
effective search space used:  2077440
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (19.0 bits)
S2: 34 (17.8 bits)