GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002358-TA|BGIBMGA002358-PA|undefined
         (54 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC035678-1|AAH35678.1|  499|Homo sapiens coiled-coil domain cont...    27   7.1  
AK097684-1|BAC05142.1|  499|Homo sapiens protein ( Homo sapiens ...    27   7.1  
M86917-1|AAA59973.1|  807|Homo sapiens oxysterol-binding protein...    27   9.4  
BC028672-1|AAH28672.1|  163|Homo sapiens chromosome 15 open read...    27   9.4  
BC011581-1|AAH11581.1|  807|Homo sapiens oxysterol binding prote...    27   9.4  
AF185705-1|AAG28373.1|  807|Homo sapiens oxysterol binding prote...    27   9.4  
AF185696-1|AAG17011.1|  807|Homo sapiens oxysterol-binding prote...    27   9.4  

>BC035678-1|AAH35678.1|  499|Homo sapiens coiled-coil domain
           containing 105 protein.
          Length = 499

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)

Query: 10  KCQYQFN-RVRDVIRQRWTVAKRLAGAKSRMLVEKQ 44
           + Q+Q N RVR ++RQR     RL+  +  +L+ +Q
Sbjct: 142 RAQHQINGRVRQLLRQREVTDHRLSEVRKGLLINQQ 177


>AK097684-1|BAC05142.1|  499|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40365 fis, clone TESTI2034774. ).
          Length = 499

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)

Query: 10  KCQYQFN-RVRDVIRQRWTVAKRLAGAKSRMLVEKQ 44
           + Q+Q N RVR ++RQR     RL+  +  +L+ +Q
Sbjct: 142 RAQHQINGRVRQLLRQREVTDHRLSEVRKGLLINQQ 177


>M86917-1|AAA59973.1|  807|Homo sapiens oxysterol-binding protein
           protein.
          Length = 807

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 13  YQFNRVRDVIRQRWTVAKRLAGAKS-RMLVEKQD 45
           Y      +V RQRW  A  LA AK+ +ML E  +
Sbjct: 159 YHLKASSEVERQRWVTALELAKAKAVKMLAESDE 192


>BC028672-1|AAH28672.1|  163|Homo sapiens chromosome 15 open
          reading frame 15 protein.
          Length = 163

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 12/28 (42%), Positives = 15/28 (53%)

Query: 9  AKCQYQFNRVRDVIRQRWTVAKRLAGAK 36
          +KC   F + RD  + RWT A R A  K
Sbjct: 34 SKCHKNFKKKRDPRKVRWTKAFRKAAGK 61


>BC011581-1|AAH11581.1|  807|Homo sapiens oxysterol binding protein
           protein.
          Length = 807

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 13  YQFNRVRDVIRQRWTVAKRLAGAKS-RMLVEKQD 45
           Y      +V RQRW  A  LA AK+ +ML E  +
Sbjct: 159 YHLKASSEVERQRWVTALELAKAKAVKMLAESDE 192


>AF185705-1|AAG28373.1|  807|Homo sapiens oxysterol binding protein
           1 protein.
          Length = 807

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 13  YQFNRVRDVIRQRWTVAKRLAGAKS-RMLVEKQD 45
           Y      +V RQRW  A  LA AK+ +ML E  +
Sbjct: 159 YHLKASSEVERQRWVTALELAKAKAVKMLAESDE 192


>AF185696-1|AAG17011.1|  807|Homo sapiens oxysterol-binding protein
           1 protein.
          Length = 807

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 13  YQFNRVRDVIRQRWTVAKRLAGAKS-RMLVEKQD 45
           Y      +V RQRW  A  LA AK+ +ML E  +
Sbjct: 159 YHLKASSEVERQRWVTALELAKAKAVKMLAESDE 192


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.328    0.135    0.417 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,689,793
Number of Sequences: 224733
Number of extensions: 157725
Number of successful extensions: 591
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 590
Number of HSP's gapped (non-prelim): 7
length of query: 54
length of database: 73,234,838
effective HSP length: 34
effective length of query: 20
effective length of database: 65,593,916
effective search space: 1311878320
effective search space used: 1311878320
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 57 (27.1 bits)