GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002357-TA|BGIBMGA002357-PA|undefined
         (90 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1U7L8 Cluster: Type IV pilus assembly PilZ; n=1; Marin...    35   0.28 
UniRef50_UPI0000E494DE Cluster: PREDICTED: similar to transient ...    34   0.48 
UniRef50_Q2PXZ4 Cluster: Putative uncharacterized protein; n=1; ...    32   1.9  
UniRef50_UPI0000DD7873 Cluster: PREDICTED: similar to CoLlagen s...    32   2.6  
UniRef50_Q5A0Z6 Cluster: Putative uncharacterized protein; n=3; ...    32   2.6  
UniRef50_O30427 Cluster: Xylanase; n=23; root|Rep: Xylanase - Ca...    30   7.9  
UniRef50_A5VL61 Cluster: Membrane protein-like protein; n=2; Lac...    30   7.9  
UniRef50_A4FCT3 Cluster: IS30 transposase; n=4; Actinomycetales|...    30   7.9  
UniRef50_A0RE74 Cluster: Phage integrase; n=1; Bacillus thuringi...    30   7.9  

>UniRef50_A1U7L8 Cluster: Type IV pilus assembly PilZ; n=1;
           Marinobacter aquaeolei VT8|Rep: Type IV pilus assembly
           PilZ - Marinobacter aquaeolei (strain ATCC 700491 / DSM
           11845 / VT8)(Marinobacter hydrocarbonoclasticus (strain
           DSM 11845))
          Length = 183

 Score = 35.1 bits (77), Expect = 0.28
 Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 19  YTTVPRLQVGLLAGRPQRQNRHATVAGRWNGNFIRNKSRIRIRDNTFGRLSGKIKSWDFE 78
           YT +P  QVG +    ++QN H  +   +   +  N  RI++ +N+  RL G + + +  
Sbjct: 115 YTGIPPFQVGAVVRHTRKQNDHLLIGAEFRLGWTANIRRIQV-ENSISRLEGFLHALNMN 173

Query: 79  KEVEE 83
           + +E+
Sbjct: 174 QCLEK 178


>UniRef50_UPI0000E494DE Cluster: PREDICTED: similar to transient
           receptor potential Ca2+ channel 6A isoform 2; n=2;
           Deuterostomia|Rep: PREDICTED: similar to transient
           receptor potential Ca2+ channel 6A isoform 2 -
           Strongylocentrotus purpuratus
          Length = 1360

 Score = 34.3 bits (75), Expect = 0.48
 Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 3/78 (3%)

Query: 10  TPRSFIRPPYTTVPRLQVGLLAGRPQRQNRHATVAGRWNGNF-IRNKSRIRIRDNTFGRL 68
           +P+SFI   Y  V R       G P R N    +  R NG F I N+  +R  ++T   +
Sbjct: 913 SPKSFIHL-YKWVARRVTRFRQGSPSRDNNQVPLGERRNGVFNILNRLELRREESTHESI 971

Query: 69  S-GKIKSWDFEKEVEEEN 85
           + G IK + F+ + ++EN
Sbjct: 972 TKGIIKRYLFKLQRDKEN 989


>UniRef50_Q2PXZ4 Cluster: Putative uncharacterized protein; n=1;
          uncultured marine bacterium Ant4D5|Rep: Putative
          uncharacterized protein - uncultured marine bacterium
          Ant4D5
          Length = 209

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 15 IRPPYTTVPRLQVGLLAGRPQR--QNRHATVAGRWNG 49
          +RP  T VPR   G L+G P R  + R   V+ RW G
Sbjct: 13 VRPSRTFVPRTTAGRLSGMPSRILRRRSPAVSCRWTG 49


>UniRef50_UPI0000DD7873 Cluster: PREDICTED: similar to CoLlagen
           sequence X-hybridizing family member (clx-1); n=1; Homo
           sapiens|Rep: PREDICTED: similar to CoLlagen sequence
           X-hybridizing family member (clx-1) - Homo sapiens
          Length = 711

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 16/63 (25%), Positives = 26/63 (41%)

Query: 11  PRSFIRPPYTTVPRLQVGLLAGRPQRQNRHATVAGRWNGNFIRNKSRIRIRDNTFGRLSG 70
           P +   PP T +P  + G    R          A  + G  +R + R R  + TFG   G
Sbjct: 590 PPTLRPPPLTRLPAAESGDAQNRISADRSSRNAAAAFGGGHVRRRRRPRSEEATFGGGGG 649

Query: 71  KIK 73
           +++
Sbjct: 650 RVR 652


>UniRef50_Q5A0Z6 Cluster: Putative uncharacterized protein; n=3;
           Candida albicans|Rep: Putative uncharacterized protein -
           Candida albicans (Yeast)
          Length = 1038

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 15/53 (28%), Positives = 27/53 (50%)

Query: 38  NRHATVAGRWNGNFIRNKSRIRIRDNTFGRLSGKIKSWDFEKEVEEENYPFKK 90
           NR    + +      RN  R+ I+   + RL  K+ + D+ + ++ ENY FK+
Sbjct: 883 NRQLEASNQELSTMTRNCKRLAIKATEYRRLGKKLDNTDWIEYIQNENYYFKE 935


>UniRef50_O30427 Cluster: Xylanase; n=23; root|Rep: Xylanase -
           Caldocellum saccharolyticum (Caldicellulosiruptor
           saccharolyticus)
          Length = 700

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 4/44 (9%)

Query: 48  NGNFIRNKSRI-RIRDNTF---GRLSGKIKSWDFEKEVEEENYP 87
           NGNF++    + R++ + +   GR  GKI +WD   E  +E  P
Sbjct: 447 NGNFLKKDELLKRLKKHIYTVVGRYKGKIYAWDVVNEAIDETQP 490


>UniRef50_A5VL61 Cluster: Membrane protein-like protein; n=2;
           Lactobacillales|Rep: Membrane protein-like protein -
           Lactobacillus reuteri F275
          Length = 202

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 12/29 (41%), Positives = 19/29 (65%)

Query: 4   ARASGVTPRSFIRPPYTTVPRLQVGLLAG 32
           A +S + P  F+ P  + VPR+ +G+LAG
Sbjct: 78  APSSPLAPLVFVNPLVSVVPRIMIGILAG 106


>UniRef50_A4FCT3 Cluster: IS30 transposase; n=4;
           Actinomycetales|Rep: IS30 transposase -
           Saccharopolyspora erythraea (strain NRRL 23338)
          Length = 382

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 12  RSFIRPPYTTVPR-LQVGLLAGRPQRQNRHATVAGRWNGNFI 52
           RS     +  +PR L   L  GRP R+N+  TV G+W    I
Sbjct: 175 RSIYTTRWKVIPRELCKRLRTGRPIRKNKRNTVKGQWRSQII 216


>UniRef50_A0RE74 Cluster: Phage integrase; n=1; Bacillus
           thuringiensis str. Al Hakam|Rep: Phage integrase -
           Bacillus thuringiensis (strain Al Hakam)
          Length = 317

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 5/55 (9%)

Query: 35  QRQNRHATVAGRWNG-----NFIRNKSRIRIRDNTFGRLSGKIKSWDFEKEVEEE 84
           +R+N H TVAG+        N++ N+  I  RDN   R+    K  + E   EE+
Sbjct: 74  ERRNSHTTVAGKLTNIKVYFNYLANEGLIDERDNPILRVKNPQKDTNVETLTEEQ 128


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.320    0.136    0.418 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,228,220
Number of Sequences: 1657284
Number of extensions: 4194043
Number of successful extensions: 8100
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 8095
Number of HSP's gapped (non-prelim): 10
length of query: 90
length of database: 575,637,011
effective HSP length: 68
effective length of query: 22
effective length of database: 462,941,699
effective search space: 10184717378
effective search space used: 10184717378
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 65 (30.3 bits)