Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002357-TA|BGIBMGA002357-PA|undefined
(90 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 25 1.3
SPBC2D10.05 |exg3||glucan 1,3-beta-glucosidase Exg3|Schizosaccha... 25 2.3
SPBC21B10.02 |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 25 2.3
SPBC19G7.07c |||conserved fungal protein|Schizosaccharomyces pom... 25 2.3
SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||M... 24 3.0
SPCC663.12 |cid12||poly|Schizosaccharomyces pombe|chr 3|||Manual 24 4.0
SPAC15A10.02 |taf12||transcription factor TFIID complex subunit ... 23 7.0
SPAC22F3.04 |mug62||AMP binding enzyme |Schizosaccharomyces pomb... 23 7.0
SPAC13G6.07c |rps601|rps6-1|40S ribosomal protein S6|Schizosacch... 23 7.0
SPAPB1E7.12 |rps602|rps6-2, rps6|40S ribosomal protein S6|Schizo... 23 7.0
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 23 9.2
SPAPB24D3.07c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 23 9.2
SPAC6C3.06c |||P-type ATPase, calcium transporting|Schizosacchar... 23 9.2
SPBC11B10.09 |cdc2|swo2|cyclin-dependent protein kinase Cdc2|Sch... 23 9.2
SPAC24H6.05 |cdc25|sal2|serine/threonine protein phosphatase Cdc... 23 9.2
SPBC947.15c |||NADH dehydrogenase|Schizosaccharomyces pombe|chr ... 23 9.2
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 25.4 bits (53), Expect = 1.3
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 53 RNKSRIRIRDNTFGRLSGKIKSWDFEKEVEEENY 86
R+ +IR RD+ LSGK+K + E + E +
Sbjct: 1692 RSVDKIRRRDDRCEHLSGKLKKLHSQLEEQHETF 1725
>SPBC2D10.05 |exg3||glucan 1,3-beta-glucosidase
Exg3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 464
Score = 24.6 bits (51), Expect = 2.3
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Query: 64 TFGRLSGKIKSWDFEKEVEEE--NYP 87
T+ L GK WDF VE++ NYP
Sbjct: 330 TYKFLHGKGGDWDFRSVVEDKVINYP 355
>SPBC21B10.02 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 159
Score = 24.6 bits (51), Expect = 2.3
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 56 SRIRIRDNTFGRLSGKIKSWDFEKEVEEENYP 87
S+ + D +F L+GK+K F E +E+ +P
Sbjct: 35 SKNMLEDPSFKTLAGKVKDEYFVSESDEKFHP 66
>SPBC19G7.07c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 687
Score = 24.6 bits (51), Expect = 2.3
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 50 NFIRNKSRIRIRDNTFGRLSGKIKSWDFEKE 80
N I KS + I D + + ++ S+D EKE
Sbjct: 80 NDINKKSPLNIPDEVWTKFISEVNSYDKEKE 110
>SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1052
Score = 24.2 bits (50), Expect = 3.0
Identities = 11/36 (30%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 50 NFIRNKSRIRIRDNTFGRLSGKIKSWDFEKEVEEEN 85
N ++N+ R+N L ++ + + EKEV+E+N
Sbjct: 532 NALQNRLEALTRENEL--LQSRVTTLEMEKEVQEKN 565
>SPCC663.12 |cid12||poly|Schizosaccharomyces pombe|chr 3|||Manual
Length = 336
Score = 23.8 bits (49), Expect = 4.0
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 65 FGRLSGKIKSWDFEKEVEEENY 86
FGRL +K W FE+++E ++
Sbjct: 154 FGRLLMLLKHWLFERDLENVHH 175
>SPAC15A10.02 |taf12||transcription factor TFIID complex subunit A
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 450
Score = 23.0 bits (47), Expect = 7.0
Identities = 13/50 (26%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 1 MRKARASGVTPRSFIRPPYTTVPRLQVGLLAGRPQRQNRH-ATVAGRWNG 49
+++ +A P+ I P ++VP VG+ A ++ AT A + +G
Sbjct: 224 LQQTQAQANAPQQRINPETSSVPETPVGVSAANVSNESTELATSATQQSG 273
>SPAC22F3.04 |mug62||AMP binding enzyme |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1428
Score = 23.0 bits (47), Expect = 7.0
Identities = 9/36 (25%), Positives = 17/36 (47%)
Query: 28 GLLAGRPQRQNRHATVAGRWNGNFIRNKSRIRIRDN 63
G RP + R A + +W G +++ + IR +
Sbjct: 1357 GTFLRRPTGEKRRADILKQWTGGDLKHMTSYLIRQD 1392
>SPAC13G6.07c |rps601|rps6-1|40S ribosomal protein
S6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 239
Score = 23.0 bits (47), Expect = 7.0
Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 9 VTPRSFIRPPYTTVPRLQVGLLAGRPQRQNRH 40
V P+ + PYT P++Q L+ R + RH
Sbjct: 162 VVPKKEGKKPYTKAPKIQ-RLVTPRTLQHKRH 192
>SPAPB1E7.12 |rps602|rps6-2, rps6|40S ribosomal protein
S6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 239
Score = 23.0 bits (47), Expect = 7.0
Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 9 VTPRSFIRPPYTTVPRLQVGLLAGRPQRQNRH 40
V P+ + PYT P++Q L+ R + RH
Sbjct: 162 VVPKKEGKKPYTKAPKIQ-RLVTPRTLQHKRH 192
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 22.6 bits (46), Expect = 9.2
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 68 LSGKIKSWDFEKE 80
L G IK WD EK+
Sbjct: 452 LDGTIKQWDIEKK 464
>SPAPB24D3.07c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 300
Score = 22.6 bits (46), Expect = 9.2
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 59 RIRDNTFGRLSGKIKSWDFEKEV 81
++RD RL+G I WD E+
Sbjct: 68 KVRDALKFRLNGPIHHWDIANEL 90
>SPAC6C3.06c |||P-type ATPase, calcium
transporting|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1033
Score = 22.6 bits (46), Expect = 9.2
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 62 DNTFGRLSGKIKSWDFEKEVEEENYPFK 89
D+ R+ K+K W +K + + P K
Sbjct: 2 DSRLNRIQSKMKLWIKDKNLSNPSIPLK 29
>SPBC11B10.09 |cdc2|swo2|cyclin-dependent protein kinase
Cdc2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 22.6 bits (46), Expect = 9.2
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 48 NGNFIRNKSRIRIRDNTFGRLSGKIKSWDFEKEVEEEN 85
+G + K +IR+ D + G S I+ KEV +EN
Sbjct: 26 SGRIVAMK-KIRLEDESEGVPSTAIREISLLKEVNDEN 62
>SPAC24H6.05 |cdc25|sal2|serine/threonine protein phosphatase
Cdc25|Schizosaccharomyces pombe|chr 1|||Manual
Length = 596
Score = 22.6 bits (46), Expect = 9.2
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 34 PQRQNRHATVAGRWNGNFIRNKSRIRIRDNTFGR 67
P H + NF RN + +R + TFG+
Sbjct: 539 PMNDASHVMTCTKAMNNFKRNATFMRTKSYTFGQ 572
>SPBC947.15c |||NADH dehydrogenase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 551
Score = 22.6 bits (46), Expect = 9.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 55 KSRIRIRDNTFGRLSGKIKSWDFEKEVEEENYPFKK 90
KS I +N F L+ KI + K+V E+N +K
Sbjct: 309 KSLITYTENLFKNLNIKIMTKTVVKDVNEKNLIVQK 344
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.320 0.136 0.418
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 445,342
Number of Sequences: 5004
Number of extensions: 15796
Number of successful extensions: 58
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 48
Number of HSP's gapped (non-prelim): 16
length of query: 90
length of database: 2,362,478
effective HSP length: 61
effective length of query: 29
effective length of database: 2,057,234
effective search space: 59659786
effective search space used: 59659786
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 46 (22.6 bits)
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