GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002357-TA|BGIBMGA002357-PA|undefined
         (90 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    21   6.8  
U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase...    21   9.0  

>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 11/37 (29%), Positives = 18/37 (48%)

Query: 4   ARASGVTPRSFIRPPYTTVPRLQVGLLAGRPQRQNRH 40
           A+ +G  P +  R P T +PR        + Q+Q R+
Sbjct: 166 AKVAGGQPSASSRQPPTPLPRRSSAQPQQQQQQQQRN 202


>U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 250

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 8/33 (24%), Positives = 18/33 (54%)

Query: 55  KSRIRIRDNTFGRLSGKIKSWDFEKEVEEENYP 87
           +S + ++DN     SG +++W  +  V+   +P
Sbjct: 147 RSWMFMQDNDSKHTSGTVQTWLADNNVKTMKWP 179


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.320    0.136    0.418 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,307
Number of Sequences: 2123
Number of extensions: 3963
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 90
length of database: 516,269
effective HSP length: 54
effective length of query: 36
effective length of database: 401,627
effective search space: 14458572
effective search space used: 14458572
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 41 (20.6 bits)