GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002357-TA|BGIBMGA002357-PA|undefined
         (90 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069356-1|AAL39501.1|  357|Drosophila melanogaster LD06095p pro...    26   5.6  
AE013599-2394|AAF57919.1|  357|Drosophila melanogaster CG6805-PA...    26   5.6  

>AY069356-1|AAL39501.1|  357|Drosophila melanogaster LD06095p
           protein.
          Length = 357

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 9/20 (45%), Positives = 13/20 (65%)

Query: 67  RLSGKIKSWDFEKEVEEENY 86
           RLSG + +WD   +VE + Y
Sbjct: 196 RLSGDMSAWDVRTDVENQRY 215


>AE013599-2394|AAF57919.1|  357|Drosophila melanogaster CG6805-PA
           protein.
          Length = 357

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 9/20 (45%), Positives = 13/20 (65%)

Query: 67  RLSGKIKSWDFEKEVEEENY 86
           RLSG + +WD   +VE + Y
Sbjct: 196 RLSGDMSAWDVRTDVENQRY 215


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.320    0.136    0.418 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,829,678
Number of Sequences: 52641
Number of extensions: 181407
Number of successful extensions: 346
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 344
Number of HSP's gapped (non-prelim): 2
length of query: 90
length of database: 24,830,863
effective HSP length: 69
effective length of query: 21
effective length of database: 21,198,634
effective search space: 445171314
effective search space used: 445171314
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 53 (25.4 bits)