Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002356-TA|BGIBMGA002356-PA|undefined
(204 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC663.11 |||ww domain binding protein 11 |Schizosaccharomyces ... 31 0.12
SPBP22H7.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 29 0.48
SPAC22F8.07c |rtf1||replication termination factor Rtf1|Schizosa... 28 1.1
SPAC139.01c ||SPAC955.02c|nuclease, XP-G family|Schizosaccharomy... 27 1.9
SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces pomb... 27 2.6
SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyc... 27 2.6
SPAC637.09 |||ribonuclease H70 |Schizosaccharomyces pombe|chr 1|... 27 2.6
SPBC1289.02c |uap2||U2 snRNP-associated protein Uap2|Schizosacch... 26 3.4
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 26 3.4
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 26 3.4
SPAC1805.02c |||electron transfer flavoprotein beta subunit |Sch... 26 4.5
SPAC7D4.04 |taf1||Taz1 interacting factor 1|Schizosaccharomyces ... 26 4.5
SPCC1322.13 |ade6|min1|phosphoribosylaminoimidazole carboxylase ... 25 5.9
SPAC4F10.13c |mpd2||GYF domain|Schizosaccharomyces pombe|chr 1||... 25 5.9
SPBC27B12.12c |||CorA family magnesium ion transporter |Schizosa... 25 5.9
SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr 1||... 25 7.8
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 25 7.8
SPBC428.20c |alp6|SPBC902.01c|gamma tubulin complex Spc98/GCP3 s... 25 7.8
SPCC320.07c |mde7||RNA-binding protein Mde7|Schizosaccharomyces ... 25 7.8
>SPCC663.11 |||ww domain binding protein 11 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 278
Score = 31.1 bits (67), Expect = 0.12
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 9 GFEMGKLEIEPGKPNKERH-PENPFIPMYPARSVF 42
G +G++E + K + +H P PFIP P RS++
Sbjct: 86 GHRVGRVESDKTKEAERQHKPRKPFIPKNPKRSIY 120
>SPBP22H7.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 255
Score = 29.1 bits (62), Expect = 0.48
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 4/46 (8%)
Query: 30 NPFIPMYPARSVFTRVVKKKCTCMSQKRFFNRGVSKKKYNNNILKE 75
N F PM+ RS+ R ++K + +S R FN+ KK +N+NILK+
Sbjct: 24 NMFNPMF--RSL--RPIQKSFSEISILRVFNKPPIKKFHNSNILKD 65
>SPAC22F8.07c |rtf1||replication termination factor
Rtf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 466
Score = 27.9 bits (59), Expect = 1.1
Identities = 11/27 (40%), Positives = 19/27 (70%)
Query: 178 IDELASYFETLVHIPKKMSSMAEMMYI 204
ID L+++ +TL+H+ K ++S E YI
Sbjct: 423 IDGLSTFSDTLIHLHKMLNSSPEETYI 449
>SPAC139.01c ||SPAC955.02c|nuclease, XP-G family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 802
Score = 27.1 bits (57), Expect = 1.9
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 112 TLVQNCNQLKISSESNEPPTKSTHSDS--STKWWRNDIAKLKEKNQAKQSTQNNSC--CQ 167
T + + +KISS+ + P T++T + + S+ W + A L++ N +SC C
Sbjct: 212 TSMNTSSNVKISSDPSSPSTQTTINSAAKSSFTWLDGNALLQDTNGLSWQQFIDSCLLCG 271
Query: 168 QALNP 172
A++P
Sbjct: 272 TAISP 276
>SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1018
Score = 26.6 bits (56), Expect = 2.6
Identities = 12/62 (19%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query: 19 PGKPNKERHPENPFIPMYPARSVFTRVVKKKCTCMSQKRFFNRGVSKKKYNNNILKEPVL 78
P K K++HP F+ + + R S F N+ +++++ +N+ P +
Sbjct: 200 PNKLPKQKHPAYSFVTLPKREEILKRPASLHSRVESTNSFINQ-LNRRRTKDNLTNNPEI 258
Query: 79 KI 80
+
Sbjct: 259 SL 260
>SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 630
Score = 26.6 bits (56), Expect = 2.6
Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 114 VQNCNQLKISSESNEPPTKSTHSD---SSTKWWRNDIAKLKEKNQAKQSTQNNSCCQQAL 170
V++ +Q ++E+N PTK ++D SS + ++ + L + + + +AL
Sbjct: 433 VRSVSQSSATTETNVKPTKEENADVPVSSPDYLKDLVNALNTSKEQHKGAIDKEKLTEAL 492
Query: 171 NPPCDVTIDELASYFETLVHIPK 193
N C V + + + +IPK
Sbjct: 493 NISC-VYVPDATDAAKPQYYIPK 514
>SPAC637.09 |||ribonuclease H70 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 623
Score = 26.6 bits (56), Expect = 2.6
Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 9/90 (10%)
Query: 62 GVSKKKYNN--NILKEPVLKILQCCDNNDISKKCSLPTENNETLNSDTLNLCTLVQNCNQ 119
G++++K N +L + + + DNN + SL N LN ++ N
Sbjct: 317 GITEEKLRNVTTVLSDVQSYLKKTVDNNTVLLGHSL----NSDLNCLKFTHPHIIDTAN- 371
Query: 120 LKISSESNEPPTKSTHSDSSTKWWRNDIAK 149
I + + PP+K + +TKW R +I K
Sbjct: 372 --IYNHTRGPPSKPSLKWLATKWLRREIQK 399
>SPBC1289.02c |uap2||U2 snRNP-associated protein
Uap2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 367
Score = 26.2 bits (55), Expect = 3.4
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Query: 121 KISSESNEPPTKSTHSDSSTKWWRNDIAKLKEKNQAKQSTQ----NNSCCQQALNPPCDV 176
K SS + TK + +S + + + K K++ +++ N + Q L P DV
Sbjct: 64 KESSNGEDRHTKRLYESTSAEGYPSGSRNKKSKSENSEASPAPVINKAVYIQGL--PLDV 121
Query: 177 TIDELASYFETLVHIPKKMSS 197
T+DE+ F+ I K + +
Sbjct: 122 TVDEIEEVFKKCGVIAKNIDN 142
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 26.2 bits (55), Expect = 3.4
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 123 SSESNEPPTKSTHSDSSTKWWRNDIAKLKEKNQAKQSTQNN 163
S ++NE P K + +++ K + D +KEK + QN+
Sbjct: 525 SKDTNEKPAKDDNKEANEKAEKVDSKDVKEKIEEAADLQNS 565
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 26.2 bits (55), Expect = 3.4
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 85 DNNDISKKCSLPTENNETLNSDTLNLCTLVQNCNQLKISSESNEPPTKSTHSDSSTKWWR 144
+NND+ K E+N++L ++ +L +N LK +E + S K R
Sbjct: 659 ENNDLRTKLLKLEESNKSLIKKQEDVDSLEKNIQTLKEDLRKSEEALR--FSKLEAKNLR 716
Query: 145 NDIAKLKEKNQAKQSTQNN 163
I LK K++ ++ +N+
Sbjct: 717 EVIDNLKGKHETLEAQRND 735
Score = 25.4 bits (53), Expect = 5.9
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 122 ISSESNEPPTKSTHSDSSTKWWRNDIAKLKEKNQAKQSTQNN 163
++S SNE KS D + N ++KE+ + +STQ++
Sbjct: 471 LNSSSNELKEKSALIDKKDQELNNLREQIKEQKKVSESTQSS 512
>SPAC1805.02c |||electron transfer flavoprotein beta subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 254
Score = 25.8 bits (54), Expect = 4.5
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 150 LKEKNQAKQSTQNNSCCQQALNPPCDVTIDELASYFETL 188
LK + A ++ + S + ++NP CD+ ++E ETL
Sbjct: 18 LKPRINATKTAVDLSGQKMSINPFCDIAVEEAIRMKETL 56
>SPAC7D4.04 |taf1||Taz1 interacting factor 1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 926
Score = 25.8 bits (54), Expect = 4.5
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 71 NILKEPVLKILQCCDNNDISKKCSLPTENNETLNSDTLNLCTLVQNCNQLKISSES 126
NIL+E +LKI + I KC+ TE + + NL L + IS +S
Sbjct: 265 NILQE-ILKIESTSTTSQIKPKCNYETEITDCMEKLQSNLSELKSSRKSSLISLKS 319
>SPCC1322.13 |ade6|min1|phosphoribosylaminoimidazole carboxylase
Ade6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 552
Score = 25.4 bits (53), Expect = 5.9
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 88 DISKKCSLPTENNETLNSDTLNLCT 112
++SKKC+L T E +N+D L T
Sbjct: 62 ELSKKCTLLTTEIEHINTDALAAVT 86
>SPAC4F10.13c |mpd2||GYF domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 992
Score = 25.4 bits (53), Expect = 5.9
Identities = 24/101 (23%), Positives = 45/101 (44%), Gaps = 7/101 (6%)
Query: 30 NPFIPMYPARSVFTRVV--KKKCTCMSQKRFFNRGV---SKKKYNNNILKEPVLKILQCC 84
N + +YP+ + + V + K +S+ + + S+ N + + L
Sbjct: 485 NKHLELYPSTAEVSNVRNDESKANSLSEISYNQQSECRSSELNVNEDSANQKEESALGTS 544
Query: 85 DNNDISKKCSLPTENNETLN--SDTLNLCTLVQNCNQLKIS 123
DN+D+ +K + P +NE+LN S L +L + Q K S
Sbjct: 545 DNSDMYEKENTPIHHNESLNQLSKDLGSISLSEETKQEKPS 585
>SPBC27B12.12c |||CorA family magnesium ion transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 25.4 bits (53), Expect = 5.9
Identities = 18/80 (22%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Query: 86 NNDISKKCSLPTENNETLNSDTLNLCTLVQNC-NQLKISSESNEPPTKSTHSDSSTKWWR 144
N S+K +P + + + DTL++C +C + K S + HS ST
Sbjct: 115 NRKASRK-KIPATQSSSADMDTLHVCPTCGSCSDSKKPQSNKKHRGRRVKHSPKSTLEVP 173
Query: 145 NDIAKLKEKNQAKQSTQNNS 164
+ I +K + + S+ ++
Sbjct: 174 DGIPDIKALSASMGSSSQHA 193
>SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1116
Score = 25.0 bits (52), Expect = 7.8
Identities = 13/46 (28%), Positives = 21/46 (45%)
Query: 151 KEKNQAKQSTQNNSCCQQALNPPCDVTIDELASYFETLVHIPKKMS 196
K K + + Q +SC ++ L P + S +ETL + K S
Sbjct: 78 KNKLSKESAIQLSSCIRKTLLAPSSTRVPSKNSSYETLTYSAKDSS 123
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 25.0 bits (52), Expect = 7.8
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Query: 86 NNDISKKCSLPTENNETLNSDTLNLCTLVQNCNQLKISSESNEPPTKSTHS-DSSTKWWR 144
N ++++K L + +SD L + +K E E + T +S + +
Sbjct: 240 NTELNEKIQLFEQKRSNYSSDGNISKILETDPTSIKELEEEVETQKRLTALWESKSSELQ 299
Query: 145 NDIAKLKEKNQAKQSTQNN 163
+++A L+EK ++QS NN
Sbjct: 300 SEVAALQEKLTSQQSLYNN 318
>SPBC428.20c |alp6|SPBC902.01c|gamma tubulin complex Spc98/GCP3
subunit Alp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 821
Score = 25.0 bits (52), Expect = 7.8
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 167 QQALNPPCDVTIDELASYFETLVH 190
Q + NP TI+ + S+F+ ++H
Sbjct: 19 QNSKNPSVPYTIETIVSFFQEIIH 42
>SPCC320.07c |mde7||RNA-binding protein Mde7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 761
Score = 25.0 bits (52), Expect = 7.8
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 142 WWRNDIAKLKEKNQAKQSTQNN 163
++RN IA LK KN S+ NN
Sbjct: 263 YFRNAIAALKAKNMLNASSTNN 284
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.314 0.128 0.383
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,012,099
Number of Sequences: 5004
Number of extensions: 44564
Number of successful extensions: 133
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 122
Number of HSP's gapped (non-prelim): 20
length of query: 204
length of database: 2,362,478
effective HSP length: 70
effective length of query: 134
effective length of database: 2,012,198
effective search space: 269634532
effective search space used: 269634532
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 52 (25.0 bits)
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