GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002356-TA|BGIBMGA002356-PA|undefined
         (204 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC064973-1|AAH64973.1|  292|Homo sapiens chromosome 20 open read...    48   2e-05
AL133000-1|CAB61348.1|  292|Homo sapiens hypothetical protein pr...    48   2e-05
AL035447-3|CAB38780.1|  292|Homo sapiens chromosome 20 open read...    48   2e-05
BC117164-1|AAI17165.1| 2061|Homo sapiens SET domain containing 2...    35   0.23 
BC117162-1|AAI17163.1| 2061|Homo sapiens SET domain containing 2...    35   0.23 
BC090954-1|AAH90954.1| 1845|Homo sapiens SETD2 protein protein.        35   0.23 
BC072440-1|AAH72440.1|  891|Homo sapiens SETD2 protein protein.        35   0.23 
AY576988-1|AAT77613.1| 1211|Homo sapiens HSPC069 isoform b protein.    35   0.23 
AY576987-1|AAT77612.1| 2061|Homo sapiens HSPC069 isoform a protein.    35   0.23 
AK131371-1|BAD18522.1| 1390|Homo sapiens protein ( Homo sapiens ...    35   0.23 
AK127782-1|BAC87131.1| 1162|Homo sapiens protein ( Homo sapiens ...    35   0.23 
AK026125-1|BAB15367.1|  661|Homo sapiens protein ( Homo sapiens ...    35   0.23 
AJ238403-1|CAC28349.1| 2061|Homo sapiens huntingtin interacting ...    35   0.23 
AB051519-1|BAB21823.2| 1915|Homo sapiens KIAA1732 protein protein.     35   0.23 
AY557611-1|AAT52049.1| 1844|Homo sapiens chromosome fragility as...    32   1.2  
AK022797-1|BAB14248.1|  801|Homo sapiens protein ( Homo sapiens ...    32   1.2  
AJ314648-1|CAC44537.2| 1844|Homo sapiens ATP(GTP)-binding protei...    32   1.2  
BC126208-1|AAI26209.1| 1161|Homo sapiens SMC1B protein protein.        31   3.7  
AL021391-1|CAI18928.1| 1235|Homo sapiens structural maintenance ...    31   3.7  
AL008718-2|CAI17945.1| 1235|Homo sapiens structural maintenance ...    31   3.7  
AK125736-1|BAC86266.1|  486|Homo sapiens Smc1l1).  protein.            31   3.7  
U58852-1|AAB02735.1| 1175|Homo sapiens NPAT protein.                   30   6.5  
X97186-1|CAA65824.1| 1427|Homo sapiens E14 protein.                    29   8.6  
D89854-1|BAA21367.1| 1427|Homo sapiens NPAT protein.                   29   8.6  
D83243-1|BAA11861.1| 1427|Homo sapiens NPAT protein.                   29   8.6  
BC050561-1|AAH50561.1| 1219|Homo sapiens NPAT protein protein.         29   8.6  
BC040356-1|AAH40356.1| 1373|Homo sapiens Similar to nuclear prot...    29   8.6  
AK096455-1|BAC04794.1|  685|Homo sapiens protein ( Homo sapiens ...    29   8.6  

>BC064973-1|AAH64973.1|  292|Homo sapiens chromosome 20 open reading
           frame 111 protein.
          Length = 292

 Score = 48.0 bits (109), Expect = 2e-05
 Identities = 23/40 (57%), Positives = 29/40 (72%)

Query: 164 SCCQQALNPPCDVTIDELASYFETLVHIPKKMSSMAEMMY 203
           SC +QA     DVTI++L+ Y E  ++IPKKMS MAEMMY
Sbjct: 252 SCSEQARVFVDDVTIEDLSGYMEYYLYIPKKMSHMAEMMY 291


>AL133000-1|CAB61348.1|  292|Homo sapiens hypothetical protein
           protein.
          Length = 292

 Score = 48.0 bits (109), Expect = 2e-05
 Identities = 23/40 (57%), Positives = 29/40 (72%)

Query: 164 SCCQQALNPPCDVTIDELASYFETLVHIPKKMSSMAEMMY 203
           SC +QA     DVTI++L+ Y E  ++IPKKMS MAEMMY
Sbjct: 252 SCSEQARVFVDDVTIEDLSGYMEYYLYIPKKMSHMAEMMY 291


>AL035447-3|CAB38780.1|  292|Homo sapiens chromosome 20 open reading
           frame 111 protein.
          Length = 292

 Score = 48.0 bits (109), Expect = 2e-05
 Identities = 23/40 (57%), Positives = 29/40 (72%)

Query: 164 SCCQQALNPPCDVTIDELASYFETLVHIPKKMSSMAEMMY 203
           SC +QA     DVTI++L+ Y E  ++IPKKMS MAEMMY
Sbjct: 252 SCSEQARVFVDDVTIEDLSGYMEYYLYIPKKMSHMAEMMY 291


>BC117164-1|AAI17165.1| 2061|Homo sapiens SET domain containing 2
           protein.
          Length = 2061

 Score = 34.7 bits (76), Expect = 0.23
 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 5/72 (6%)

Query: 55  QKRFFNRGVSKKKYNNNILKEPVLKILQCCDNNDISKKCSLPTENNETLNSDTLNLCTLV 114
           Q +  +  V    Y+  ++KEPV   + CC   D    C+L   N    NS+  N+   V
Sbjct: 254 QDKLMSMPVMTVDYSKTVVKEPVDTRVSCCKTKDSDIYCTLNDSNPSLCNSEAENIEPSV 313

Query: 115 QNCNQLKISSES 126
                +KISS S
Sbjct: 314 -----MKISSNS 320


>BC117162-1|AAI17163.1| 2061|Homo sapiens SET domain containing 2
           protein.
          Length = 2061

 Score = 34.7 bits (76), Expect = 0.23
 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 5/72 (6%)

Query: 55  QKRFFNRGVSKKKYNNNILKEPVLKILQCCDNNDISKKCSLPTENNETLNSDTLNLCTLV 114
           Q +  +  V    Y+  ++KEPV   + CC   D    C+L   N    NS+  N+   V
Sbjct: 254 QDKLMSMPVMTVDYSKTVVKEPVDTRVSCCKTKDSDIYCTLNDSNPSLCNSEAENIEPSV 313

Query: 115 QNCNQLKISSES 126
                +KISS S
Sbjct: 314 -----MKISSNS 320


>BC090954-1|AAH90954.1| 1845|Homo sapiens SETD2 protein protein.
          Length = 1845

 Score = 34.7 bits (76), Expect = 0.23
 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 5/72 (6%)

Query: 55  QKRFFNRGVSKKKYNNNILKEPVLKILQCCDNNDISKKCSLPTENNETLNSDTLNLCTLV 114
           Q +  +  V    Y+  ++KEPV   + CC   D    C+L   N    NS+  N+   V
Sbjct: 38  QDKLMSMPVMTVDYSKTVVKEPVDTRVSCCKTKDSDIYCTLNDSNPSLCNSEAENIEPSV 97

Query: 115 QNCNQLKISSES 126
                +KISS S
Sbjct: 98  -----MKISSNS 104


>BC072440-1|AAH72440.1|  891|Homo sapiens SETD2 protein protein.
          Length = 891

 Score = 34.7 bits (76), Expect = 0.23
 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 5/72 (6%)

Query: 55  QKRFFNRGVSKKKYNNNILKEPVLKILQCCDNNDISKKCSLPTENNETLNSDTLNLCTLV 114
           Q +  +  V    Y+  ++KEPV   + CC   D    C+L   N    NS+  N+   V
Sbjct: 254 QDKLMSMPVMTVDYSKTVVKEPVDTRVSCCKTKDSDIYCTLNDSNPSLCNSEAENIEPSV 313

Query: 115 QNCNQLKISSES 126
                +KISS S
Sbjct: 314 -----MKISSNS 320


>AY576988-1|AAT77613.1| 1211|Homo sapiens HSPC069 isoform b protein.
          Length = 1211

 Score = 34.7 bits (76), Expect = 0.23
 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 5/72 (6%)

Query: 55  QKRFFNRGVSKKKYNNNILKEPVLKILQCCDNNDISKKCSLPTENNETLNSDTLNLCTLV 114
           Q +  +  V    Y+  ++KEPV   + CC   D    C+L   N    NS+  N+   V
Sbjct: 254 QDKLMSMPVMTVDYSKTVVKEPVDTRVSCCKTKDSDIYCTLNDSNPSLCNSEAENIEPSV 313

Query: 115 QNCNQLKISSES 126
                +KISS S
Sbjct: 314 -----MKISSNS 320


>AY576987-1|AAT77612.1| 2061|Homo sapiens HSPC069 isoform a protein.
          Length = 2061

 Score = 34.7 bits (76), Expect = 0.23
 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 5/72 (6%)

Query: 55  QKRFFNRGVSKKKYNNNILKEPVLKILQCCDNNDISKKCSLPTENNETLNSDTLNLCTLV 114
           Q +  +  V    Y+  ++KEPV   + CC   D    C+L   N    NS+  N+   V
Sbjct: 254 QDKLMSMPVMTVDYSKTVVKEPVDTRVSCCKTKDSDIYCTLNDSNPSLCNSEAENIEPSV 313

Query: 115 QNCNQLKISSES 126
                +KISS S
Sbjct: 314 -----MKISSNS 320


>AK131371-1|BAD18522.1| 1390|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16420 fis, clone BRACE3003053. ).
          Length = 1390

 Score = 34.7 bits (76), Expect = 0.23
 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 5/72 (6%)

Query: 55  QKRFFNRGVSKKKYNNNILKEPVLKILQCCDNNDISKKCSLPTENNETLNSDTLNLCTLV 114
           Q +  +  V    Y+  ++KEPV   + CC   D    C+L   N    NS+  N+   V
Sbjct: 757 QDKLMSMPVMTVDYSKTVVKEPVDTRVSCCKTKDSDIYCTLNDSNPSLCNSEAENIEPSV 816

Query: 115 QNCNQLKISSES 126
                +KISS S
Sbjct: 817 -----MKISSNS 823


>AK127782-1|BAC87131.1| 1162|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45883 fis, clone OCBBF3021086. ).
          Length = 1162

 Score = 34.7 bits (76), Expect = 0.23
 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 5/72 (6%)

Query: 55  QKRFFNRGVSKKKYNNNILKEPVLKILQCCDNNDISKKCSLPTENNETLNSDTLNLCTLV 114
           Q +  +  V    Y+  ++KEPV   + CC   D    C+L   N    NS+  N+   V
Sbjct: 535 QDKLMSMPVMTVDYSKTVVKEPVDTRVSCCKTKDSDIYCTLNDSNPSLCNSEAENIEPSV 594

Query: 115 QNCNQLKISSES 126
                +KISS S
Sbjct: 595 -----MKISSNS 601


>AK026125-1|BAB15367.1|  661|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22472 fis, clone HRC10558. ).
          Length = 661

 Score = 34.7 bits (76), Expect = 0.23
 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 5/72 (6%)

Query: 55  QKRFFNRGVSKKKYNNNILKEPVLKILQCCDNNDISKKCSLPTENNETLNSDTLNLCTLV 114
           Q +  +  V    Y+  ++KEPV   + CC   D    C+L   N    NS+  N+   V
Sbjct: 21  QDKLMSMPVMTVDYSKTVVKEPVDTRVSCCKTKDSDIYCTLNDSNPSLCNSEAENIEPSV 80

Query: 115 QNCNQLKISSES 126
                +KISS S
Sbjct: 81  -----MKISSNS 87


>AJ238403-1|CAC28349.1| 2061|Homo sapiens huntingtin interacting
           protein 1 protein.
          Length = 2061

 Score = 34.7 bits (76), Expect = 0.23
 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 5/72 (6%)

Query: 55  QKRFFNRGVSKKKYNNNILKEPVLKILQCCDNNDISKKCSLPTENNETLNSDTLNLCTLV 114
           Q +  +  V    Y+  ++KEPV   + CC   D    C+L   N    NS+  N+   V
Sbjct: 254 QDKLMSMPVMTVDYSKTVVKEPVDTRVSCCKTKDSDIYCTLNDSNPSLCNSEAENIEPSV 313

Query: 115 QNCNQLKISSES 126
                +KISS S
Sbjct: 314 -----MKISSNS 320


>AB051519-1|BAB21823.2| 1915|Homo sapiens KIAA1732 protein protein.
          Length = 1915

 Score = 34.7 bits (76), Expect = 0.23
 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 5/72 (6%)

Query: 55  QKRFFNRGVSKKKYNNNILKEPVLKILQCCDNNDISKKCSLPTENNETLNSDTLNLCTLV 114
           Q +  +  V    Y+  ++KEPV   + CC   D    C+L   N    NS+  N+   V
Sbjct: 108 QDKLMSMPVMTVDYSKTVVKEPVDTRVSCCKTKDSDIYCTLNDSNPSLCNSEAENIEPSV 167

Query: 115 QNCNQLKISSES 126
                +KISS S
Sbjct: 168 -----MKISSNS 174


>AY557611-1|AAT52049.1| 1844|Homo sapiens chromosome fragility
           associated gene 1 protein.
          Length = 1844

 Score = 32.3 bits (70), Expect = 1.2
 Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 7/92 (7%)

Query: 71  NILKEPVLKILQCCDNNDISKKCSLPTENNETLNSDTLNLCTLVQNCNQLKISSESNEPP 130
           +I  + +LK+   C+NN +S+K S+P ++ +   S   +  +L      L +S+  +   
Sbjct: 543 DIANDDLLKVSSLCNNNKLSRKTSIPVKDIKLTQSKAESEASL------LNVSTPKSTRR 596

Query: 131 TKSTHSDSSTKWWRN-DIAKLKEKNQAKQSTQ 161
           +    S  +T+  R  D   +++ +Q K STQ
Sbjct: 597 SGRISSTPTTETIRGIDSDDVQDNSQLKASTQ 628


>AK022797-1|BAB14248.1|  801|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12735 fis, clone NT2RP2000258, weakly similar to
           ACTIVATOR 1 140 KD SUBUNIT. ).
          Length = 801

 Score = 32.3 bits (70), Expect = 1.2
 Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 7/92 (7%)

Query: 71  NILKEPVLKILQCCDNNDISKKCSLPTENNETLNSDTLNLCTLVQNCNQLKISSESNEPP 130
           +I  + +LK+   C+NN +S+K S+P ++ +   S   +  +L      L +S+  +   
Sbjct: 140 DIANDDLLKVSSLCNNNKLSRKTSIPVKDIKLTQSKAESEASL------LNVSTPKSTRR 193

Query: 131 TKSTHSDSSTKWWRN-DIAKLKEKNQAKQSTQ 161
           +    S  +T+  R  D   +++ +Q K STQ
Sbjct: 194 SGRISSTPTTETIRGIDSDDVQDNSQLKASTQ 225


>AJ314648-1|CAC44537.2| 1844|Homo sapiens ATP(GTP)-binding protein
           protein.
          Length = 1844

 Score = 32.3 bits (70), Expect = 1.2
 Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 7/92 (7%)

Query: 71  NILKEPVLKILQCCDNNDISKKCSLPTENNETLNSDTLNLCTLVQNCNQLKISSESNEPP 130
           +I  + +LK+   C+NN +S+K S+P ++ +   S   +  +L      L +S+  +   
Sbjct: 543 DIANDDLLKVSSLCNNNKLSRKTSIPVKDIKLTQSKAESEASL------LNVSTPKSTRR 596

Query: 131 TKSTHSDSSTKWWRN-DIAKLKEKNQAKQSTQ 161
           +    S  +T+  R  D   +++ +Q K STQ
Sbjct: 597 SGRISSTPTTETIRGIDSDDVQDNSQLKASTQ 628


>BC126208-1|AAI26209.1| 1161|Homo sapiens SMC1B protein protein.
          Length = 1161

 Score = 30.7 bits (66), Expect = 3.7
 Identities = 25/118 (21%), Positives = 52/118 (44%), Gaps = 1/118 (0%)

Query: 47  KKKCTCMSQKRFFNRGVSKKKYNN-NILKEPVLKILQCCDNNDISKKCSLPTENNETLNS 105
           +K+ T ++ +  ++R   KKK N  N LKE + K  +  D+   +++  L T N      
Sbjct: 811 EKQKTRLNVQLEYSRSHLKKKLNKINTLKETIQKGSEDIDHLKKAEENCLQTVNELMAKQ 870

Query: 106 DTLNLCTLVQNCNQLKISSESNEPPTKSTHSDSSTKWWRNDIAKLKEKNQAKQSTQNN 163
             L    + QN +  K+ ++  E   K    D      + ++  ++   + K+  ++N
Sbjct: 871 QQLKDIRVTQNSSAEKVQTQIEEERKKFLAVDREVGKLQKEVVSIQTSLEQKRLEKHN 928


>AL021391-1|CAI18928.1| 1235|Homo sapiens structural maintenance of
           chromosomes 1B protein.
          Length = 1235

 Score = 30.7 bits (66), Expect = 3.7
 Identities = 25/118 (21%), Positives = 52/118 (44%), Gaps = 1/118 (0%)

Query: 47  KKKCTCMSQKRFFNRGVSKKKYNN-NILKEPVLKILQCCDNNDISKKCSLPTENNETLNS 105
           +K+ T ++ +  ++R   KKK N  N LKE + K  +  D+   +++  L T N      
Sbjct: 811 EKQKTRLNVQLEYSRSHLKKKLNKINTLKETIQKGSEDIDHLKKAEENCLQTVNELMAKQ 870

Query: 106 DTLNLCTLVQNCNQLKISSESNEPPTKSTHSDSSTKWWRNDIAKLKEKNQAKQSTQNN 163
             L    + QN +  K+ ++  E   K    D      + ++  ++   + K+  ++N
Sbjct: 871 QQLKDIRVTQNSSAEKVQTQIEEERKKFLAVDREVGKLQKEVVSIQTSLEQKRLEKHN 928


>AL008718-2|CAI17945.1| 1235|Homo sapiens structural maintenance of
           chromosomes 1B protein.
          Length = 1235

 Score = 30.7 bits (66), Expect = 3.7
 Identities = 25/118 (21%), Positives = 52/118 (44%), Gaps = 1/118 (0%)

Query: 47  KKKCTCMSQKRFFNRGVSKKKYNN-NILKEPVLKILQCCDNNDISKKCSLPTENNETLNS 105
           +K+ T ++ +  ++R   KKK N  N LKE + K  +  D+   +++  L T N      
Sbjct: 811 EKQKTRLNVQLEYSRSHLKKKLNKINTLKETIQKGSEDIDHLKKAEENCLQTVNELMAKQ 870

Query: 106 DTLNLCTLVQNCNQLKISSESNEPPTKSTHSDSSTKWWRNDIAKLKEKNQAKQSTQNN 163
             L    + QN +  K+ ++  E   K    D      + ++  ++   + K+  ++N
Sbjct: 871 QQLKDIRVTQNSSAEKVQTQIEEERKKFLAVDREVGKLQKEVVSIQTSLEQKRLEKHN 928


>AK125736-1|BAC86266.1|  486|Homo sapiens Smc1l1).  protein.
          Length = 486

 Score = 30.7 bits (66), Expect = 3.7
 Identities = 25/118 (21%), Positives = 52/118 (44%), Gaps = 1/118 (0%)

Query: 47  KKKCTCMSQKRFFNRGVSKKKYNN-NILKEPVLKILQCCDNNDISKKCSLPTENNETLNS 105
           +K+ T ++ +  ++R   KKK N  N LKE + K  +  D+   +++  L T N      
Sbjct: 62  EKQKTRLNVQLEYSRSHLKKKLNKINTLKETIQKGSEDIDHLKKAEENCLQTVNELMAKQ 121

Query: 106 DTLNLCTLVQNCNQLKISSESNEPPTKSTHSDSSTKWWRNDIAKLKEKNQAKQSTQNN 163
             L    + QN +  K+ ++  E   K    D      + ++  ++   + K+  ++N
Sbjct: 122 QQLKDIRVTQNSSAEKVQTQIEEERKKFLAVDREVGKLQKEVVSIQTSLEQKRLEKHN 179


>U58852-1|AAB02735.1| 1175|Homo sapiens NPAT protein.
          Length = 1175

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 36/134 (26%), Positives = 57/134 (42%), Gaps = 7/134 (5%)

Query: 46  VKKKCTCMSQKRFFNRGVSKKKYNNNILKEPVLKILQCCDNNDISKKCSLPTE-NNETLN 104
           VK K      K   +  V K K   N+L EPV+  L  C +N   +   LP    +  LN
Sbjct: 558 VKLKINFHGSKSSDSSEVHKSKIEINVL-EPVMSQLSNCQDNSCLQSEILPVSVESSHLN 616

Query: 105 SD---TLNLCTLVQNCNQLKISSESNE-PPTKSTHSDSSTKWWRNDIAKLKEKNQAKQST 160
                 ++L   + +  Q    S S E   T++    S ++  +   + +KE+N    S 
Sbjct: 617 VSGQVEIHLGDSLSSTKQPSNDSASVELNHTENEAQASKSENSQEPSSSVKEENTIFLSL 676

Query: 161 QNNSCCQQ-ALNPP 173
             N+ C++ AL PP
Sbjct: 677 GGNANCEKVALTPP 690


>X97186-1|CAA65824.1| 1427|Homo sapiens E14 protein.
          Length = 1427

 Score = 29.5 bits (63), Expect = 8.6
 Identities = 35/134 (26%), Positives = 57/134 (42%), Gaps = 7/134 (5%)

Query: 46  VKKKCTCMSQKRFFNRGVSKKKYNNNILKEPVLKILQCCDNNDISKKCSLPTE-NNETLN 104
           VK K      K   +  + K K   N+L EPV+  L  C +N   +   LP    +  LN
Sbjct: 558 VKLKINFHGSKSSDSSEIHKSKIEINVL-EPVMSQLSNCQDNSCLQSEILPVSVESSHLN 616

Query: 105 SD---TLNLCTLVQNCNQLKISSESNE-PPTKSTHSDSSTKWWRNDIAKLKEKNQAKQST 160
                 ++L   + +  Q    S S E   T++    S ++  +   + +KE+N    S 
Sbjct: 617 VSGQIEIHLGDSLSSTKQPSNDSASVELNHTENEAQASKSENSQEPSSSVKEENTIFLSL 676

Query: 161 QNNSCCQQ-ALNPP 173
             N+ C++ AL PP
Sbjct: 677 GGNANCEKVALTPP 690


>D89854-1|BAA21367.1| 1427|Homo sapiens NPAT protein.
          Length = 1427

 Score = 29.5 bits (63), Expect = 8.6
 Identities = 35/134 (26%), Positives = 57/134 (42%), Gaps = 7/134 (5%)

Query: 46  VKKKCTCMSQKRFFNRGVSKKKYNNNILKEPVLKILQCCDNNDISKKCSLPTE-NNETLN 104
           VK K      K   +  + K K   N+L EPV+  L  C +N   +   LP    +  LN
Sbjct: 558 VKLKINFHGSKSSDSSEIHKSKIEINVL-EPVMSQLSNCQDNSCLQSEILPVSVESSHLN 616

Query: 105 SD---TLNLCTLVQNCNQLKISSESNE-PPTKSTHSDSSTKWWRNDIAKLKEKNQAKQST 160
                 ++L   + +  Q    S S E   T++    S ++  +   + +KE+N    S 
Sbjct: 617 VSGQVEIHLGDSLSSTKQPSNDSASVELNHTENEAQASKSENSQEPSSSVKEENTIFLSL 676

Query: 161 QNNSCCQQ-ALNPP 173
             N+ C++ AL PP
Sbjct: 677 GGNANCEKVALTPP 690


>D83243-1|BAA11861.1| 1427|Homo sapiens NPAT protein.
          Length = 1427

 Score = 29.5 bits (63), Expect = 8.6
 Identities = 35/134 (26%), Positives = 57/134 (42%), Gaps = 7/134 (5%)

Query: 46  VKKKCTCMSQKRFFNRGVSKKKYNNNILKEPVLKILQCCDNNDISKKCSLPTE-NNETLN 104
           VK K      K   +  + K K   N+L EPV+  L  C +N   +   LP    +  LN
Sbjct: 558 VKLKINFHGSKSSDSSEIHKSKIEINVL-EPVMSQLSNCQDNSCLQSEILPVSVESSHLN 616

Query: 105 SD---TLNLCTLVQNCNQLKISSESNE-PPTKSTHSDSSTKWWRNDIAKLKEKNQAKQST 160
                 ++L   + +  Q    S S E   T++    S ++  +   + +KE+N    S 
Sbjct: 617 VSGQVEIHLGDSLSSTKQPSNDSASVELNHTENEAQASKSENSQEPSSSVKEENTIFLSL 676

Query: 161 QNNSCCQQ-ALNPP 173
             N+ C++ AL PP
Sbjct: 677 GGNANCEKVALTPP 690


>BC050561-1|AAH50561.1| 1219|Homo sapiens NPAT protein protein.
          Length = 1219

 Score = 29.5 bits (63), Expect = 8.6
 Identities = 35/134 (26%), Positives = 57/134 (42%), Gaps = 7/134 (5%)

Query: 46  VKKKCTCMSQKRFFNRGVSKKKYNNNILKEPVLKILQCCDNNDISKKCSLPTE-NNETLN 104
           VK K      K   +  + K K   N+L EPV+  L  C +N   +   LP    +  LN
Sbjct: 558 VKLKINFHGSKSSDSSEIHKSKIEINVL-EPVMSQLSNCQDNSCLQSEILPVSVESSHLN 616

Query: 105 SD---TLNLCTLVQNCNQLKISSESNE-PPTKSTHSDSSTKWWRNDIAKLKEKNQAKQST 160
                 ++L   + +  Q    S S E   T++    S ++  +   + +KE+N    S 
Sbjct: 617 VSGQVEIHLGDSLSSTKQPSNDSASVELNHTENEAQASKSENSQEPSSSVKEENTIFLSL 676

Query: 161 QNNSCCQQ-ALNPP 173
             N+ C++ AL PP
Sbjct: 677 GGNANCEKVALTPP 690


>BC040356-1|AAH40356.1| 1373|Homo sapiens Similar to nuclear
           protein, ataxia-telangiectasia locus protein.
          Length = 1373

 Score = 29.5 bits (63), Expect = 8.6
 Identities = 35/134 (26%), Positives = 57/134 (42%), Gaps = 7/134 (5%)

Query: 46  VKKKCTCMSQKRFFNRGVSKKKYNNNILKEPVLKILQCCDNNDISKKCSLPTE-NNETLN 104
           VK K      K   +  + K K   N+L EPV+  L  C +N   +   LP    +  LN
Sbjct: 558 VKLKINFHGSKSSDSSEIHKSKIEINVL-EPVMSQLSNCQDNSCLQSEILPVSVESSHLN 616

Query: 105 SD---TLNLCTLVQNCNQLKISSESNE-PPTKSTHSDSSTKWWRNDIAKLKEKNQAKQST 160
                 ++L   + +  Q    S S E   T++    S ++  +   + +KE+N    S 
Sbjct: 617 VSGQVEIHLGDSLSSTKQPSNDSASVELNHTENEAQASKSENSQEPSSSVKEENTIFLSL 676

Query: 161 QNNSCCQQ-ALNPP 173
             N+ C++ AL PP
Sbjct: 677 GGNANCEKVALTPP 690


>AK096455-1|BAC04794.1|  685|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39136 fis, clone NTONG2008944, highly similar to
           Homo sapiens sentrin-specific protease SENP6 mRNA. ).
          Length = 685

 Score = 29.5 bits (63), Expect = 8.6
 Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 9/80 (11%)

Query: 60  NRGVSKKK-YNNNILKEPVLKILQCCDNNDISKKCSLPTENNETLNSDTLNLCTLVQNCN 118
           N G++ KK Y NN+ K P+  I+ C    D+SK   L T     L    +   T   N  
Sbjct: 260 NTGLTTKKFYGNNVEKVPIDIIVNC----DVSKHTYLQTNGKVILPGAKIPKIT---NLK 312

Query: 119 QLKIS-SESNEPPTKSTHSD 137
           + K S S+ N+P   S+  D
Sbjct: 313 ERKTSLSDLNDPIILSSDDD 332


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.314    0.128    0.383 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,410,490
Number of Sequences: 224733
Number of extensions: 1218263
Number of successful extensions: 2517
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 2499
Number of HSP's gapped (non-prelim): 28
length of query: 204
length of database: 73,234,838
effective HSP length: 86
effective length of query: 118
effective length of database: 53,907,800
effective search space: 6361120400
effective search space used: 6361120400
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 63 (29.5 bits)