GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002355-TA|BGIBMGA002355-PA|IPR000672|Tetrahydrofolate
dehydrogenase/cyclohydrolase
         (301 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    25   0.62 
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    22   7.6  

>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 25.4 bits (53), Expect = 0.62
 Identities = 9/23 (39%), Positives = 17/23 (73%)

Query: 72  DITEEQLLSEIQNLNEDNSVDGI 94
           D+T + LL  I+NL + +++DG+
Sbjct: 137 DMTRQYLLQLIRNLRQSSALDGV 159


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)

Query: 113 IAPEKDIDGFHIINIGRLCVDLPTIVPA 140
           +A EKDIDGF ++    L  D   IV A
Sbjct: 219 LAKEKDIDGF-LVGGASLKPDFVQIVNA 245


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.136    0.388 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,052
Number of Sequences: 429
Number of extensions: 3221
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 2
length of query: 301
length of database: 140,377
effective HSP length: 57
effective length of query: 244
effective length of database: 115,924
effective search space: 28285456
effective search space used: 28285456
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 44 (21.8 bits)