GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002354-TA|BGIBMGA002354-PA|IPR000209|Peptidase S8 and
S53, subtilisin, kexin, sedolisin, IPR002884|Proprotein convertase, P,
IPR006211|Furin-like cysteine rich region, IPR006212|Furin-like
repeat, IPR006058|2Fe-2S ferredoxin, iron-sulfur binding site,
IPR008979|Galactose-binding like, IPR009030|Growth factor, receptor
         (998 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    34   0.005
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          26   1.8  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    26   1.8  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    25   2.3  
AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective...    25   2.3  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    25   2.3  
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               25   3.1  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        25   4.0  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        25   4.0  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        25   4.0  
EF127805-1|ABL67942.1|  461|Apis mellifera nicotinic acetylcholi...    23   9.3  
EF127804-1|ABL67941.1|  461|Apis mellifera nicotinic acetylcholi...    23   9.3  
EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholi...    23   9.3  
EF127802-1|ABL67939.1|  461|Apis mellifera nicotinic acetylcholi...    23   9.3  
EF127801-1|ABL67938.1|  461|Apis mellifera nicotinic acetylcholi...    23   9.3  
EF127800-1|ABL67937.1|  461|Apis mellifera nicotinic acetylcholi...    23   9.3  
DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholi...    23   9.3  
DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholi...    23   9.3  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 34.3 bits (75), Expect = 0.005
 Identities = 12/20 (60%), Positives = 15/20 (75%)

Query: 711 CPSGFYADSQKRECLECPIG 730
           C  G+ AD +K+EC ECPIG
Sbjct: 249 CKPGYQADVEKQECTECPIG 268



 Score = 27.1 bits (57), Expect = 0.76
 Identities = 16/58 (27%), Positives = 21/58 (36%), Gaps = 1/58 (1%)

Query: 798 WRLAAGECRPECPQNFFPWETSCRRCHHYCQDCHGAGPQKCTSCPPHFSLEDGLCVEC 855
           W L +G C  +        +  C  C    +  H AG   C +CP H    D    EC
Sbjct: 240 WYLPSGGCHCKPGYQADVEKQECTECP-IGKFKHEAGSHSCEACPAHSKSSDYGFTEC 296


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 25.8 bits (54), Expect = 1.8
 Identities = 8/17 (47%), Positives = 13/17 (76%)

Query: 278 QPLEKEEGWIVNGVKRK 294
           +P+  +E W+VN +KRK
Sbjct: 27  RPITGDEKWVVNNIKRK 43


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 25.8 bits (54), Expect = 1.8
 Identities = 16/58 (27%), Positives = 22/58 (37%), Gaps = 4/58 (6%)

Query: 559 NSCVSKCPPRSFVNQGG--VCWPCHESCETCAGAGQD-SCLTCAPAHLLVVDLAVCLQ 613
           ++C   C P     Q G   CW C + CE       + +C+ C P      D   C Q
Sbjct: 447 SACSLPCEPGMIKKQQGDTCCWVC-DQCEEYEYVHDEYTCMDCGPGKWPHEDKRGCYQ 503


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 4/47 (8%)

Query: 334 KSIETSFGYTISVHMDVNGCSGTTNE----VRFLEHVQCKISLSFFP 376
           KS +  FGY IS   DV+   GT  +    VR  + +  K+ L F P
Sbjct: 76  KSPQVDFGYDISNFTDVDPVYGTLADFDRLVRRAKSLGLKVILDFVP 122


>AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective
           protein-1 protein.
          Length = 128

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 19/75 (25%), Positives = 22/75 (29%)

Query: 651 SYVLYNGSCLAACPPSTYQKDYYGCMPCHESCDSCYGPSQNSCVSCKIGDFVFKNQCISK 710
           SY L  G     C          G + C +  D   G  QN    C  G     N+CI  
Sbjct: 34  SYCLGCGDSCHKCKYGIAMSSACGIVQCAKGPDELCGGPQNYLGICAEGMQCSCNKCIGC 93

Query: 711 CPSGFYADSQKRECL 725
               F        CL
Sbjct: 94  SAEKFECSKTSNPCL 108



 Score = 24.2 bits (50), Expect = 5.3
 Identities = 22/76 (28%), Positives = 28/76 (36%), Gaps = 6/76 (7%)

Query: 865 TRKCRPCHDSCRSC----SGSGPTSCVTCAH-PLQLDRVNYKCLPCCLENM-ASIYLTVN 918
           T  C  C DSC  C    + S     V CA  P +L       L  C E M  S    + 
Sbjct: 33  TSYCLGCGDSCHKCKYGIAMSSACGIVQCAKGPDELCGGPQNYLGICAEGMQCSCNKCIG 92

Query: 919 ETSDCCHCDKDIGGCL 934
            +++   C K    CL
Sbjct: 93  CSAEKFECSKTSNPCL 108


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 15/57 (26%), Positives = 21/57 (36%), Gaps = 2/57 (3%)

Query: 559 NSCVSKCPPRSFVNQGG--VCWPCHESCETCAGAGQDSCLTCAPAHLLVVDLAVCLQ 613
           ++C   C P     Q G   CW C +  E      + +C+ C P      D   C Q
Sbjct: 537 SACSLPCEPGMIKKQQGDTCCWVCDQCEEYEYVYDEYTCMDCGPGKWPHEDKRGCYQ 593


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 6/57 (10%)

Query: 885 SC-VTCA----HPLQLDRVNYKCLPCCLENMASIYLTVNETSDCCHCDKDIGGCLNG 936
           SC +TCA    H +Q D +    L   + N  +I + V   S+C + +K    C NG
Sbjct: 76  SCFITCALEKSHIIQNDEIQLDKL-VEMANRKNISIDVKMLSECINANKSTDKCENG 131


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 5/52 (9%)

Query: 840 SCPPHFSLEDGLCVEC---LSSQYYEVR-TRKCRPCHDSCRSCSGSGPTSCV 887
           SC P   L+  LC +C   L+S    +R   KC+  ++      G G  SC+
Sbjct: 533 SCAPGAPLDSKLCQQCVGNLASNNDRIRQVTKCKATNEETYR-GGKGALSCL 583


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 5/52 (9%)

Query: 840 SCPPHFSLEDGLCVEC---LSSQYYEVR-TRKCRPCHDSCRSCSGSGPTSCV 887
           SC P   L+  LC +C   L+S    +R   KC+  ++      G G  SC+
Sbjct: 533 SCAPGAPLDSKLCQQCVGNLASNNDRIRQVTKCKATNEETYR-GGKGALSCL 583


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 5/52 (9%)

Query: 840 SCPPHFSLEDGLCVEC---LSSQYYEVR-TRKCRPCHDSCRSCSGSGPTSCV 887
           SC P   L+  LC +C   L+S    +R   KC+  ++      G G  SC+
Sbjct: 533 SCAPGAPLDSKLCQQCVGNLASNNDRIRQVTKCKATNEETYR-GGKGALSCL 583


>EF127805-1|ABL67942.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 6 protein.
          Length = 461

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 2/59 (3%)

Query: 331 NEDKSIETSFGYTISVHMDVNGCSG--TTNEVRFLEHVQCKISLSFFPRGNLRILLTSP 387
           NE + +E  FG T+   +DV+  +   TTN    LE V   +  +    G ++ L  +P
Sbjct: 7   NESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITP 65


>EF127804-1|ABL67941.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 5 protein.
          Length = 461

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 2/59 (3%)

Query: 331 NEDKSIETSFGYTISVHMDVNGCSG--TTNEVRFLEHVQCKISLSFFPRGNLRILLTSP 387
           NE + +E  FG T+   +DV+  +   TTN    LE V   +  +    G ++ L  +P
Sbjct: 7   NESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITP 65


>EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 4 protein.
          Length = 461

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 2/59 (3%)

Query: 331 NEDKSIETSFGYTISVHMDVNGCSG--TTNEVRFLEHVQCKISLSFFPRGNLRILLTSP 387
           NE + +E  FG T+   +DV+  +   TTN    LE V   +  +    G ++ L  +P
Sbjct: 7   NESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITP 65


>EF127802-1|ABL67939.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 3 protein.
          Length = 461

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 2/59 (3%)

Query: 331 NEDKSIETSFGYTISVHMDVNGCSG--TTNEVRFLEHVQCKISLSFFPRGNLRILLTSP 387
           NE + +E  FG T+   +DV+  +   TTN    LE V   +  +    G ++ L  +P
Sbjct: 7   NESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITP 65


>EF127801-1|ABL67938.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 2 protein.
          Length = 461

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 2/59 (3%)

Query: 331 NEDKSIETSFGYTISVHMDVNGCSG--TTNEVRFLEHVQCKISLSFFPRGNLRILLTSP 387
           NE + +E  FG T+   +DV+  +   TTN    LE V   +  +    G ++ L  +P
Sbjct: 7   NESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITP 65


>EF127800-1|ABL67937.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 1 protein.
          Length = 461

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 2/59 (3%)

Query: 331 NEDKSIETSFGYTISVHMDVNGCSG--TTNEVRFLEHVQCKISLSFFPRGNLRILLTSP 387
           NE + +E  FG T+   +DV+  +   TTN    LE V   +  +    G ++ L  +P
Sbjct: 7   NESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITP 65


>DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 2/59 (3%)

Query: 331 NEDKSIETSFGYTISVHMDVNGCSG--TTNEVRFLEHVQCKISLSFFPRGNLRILLTSP 387
           NE + +E  FG T+   +DV+  +   TTN    LE V   +  +    G ++ L  +P
Sbjct: 75  NESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITP 133


>DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 2/59 (3%)

Query: 331 NEDKSIETSFGYTISVHMDVNGCSG--TTNEVRFLEHVQCKISLSFFPRGNLRILLTSP 387
           NE + +E  FG T+   +DV+  +   TTN    LE V   +  +    G ++ L  +P
Sbjct: 75  NESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITP 133


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.135    0.449 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 328,136
Number of Sequences: 429
Number of extensions: 15317
Number of successful extensions: 55
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 49
Number of HSP's gapped (non-prelim): 21
length of query: 998
length of database: 140,377
effective HSP length: 64
effective length of query: 934
effective length of database: 112,921
effective search space: 105468214
effective search space used: 105468214
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 48 (23.4 bits)