Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002352-TA|BGIBMGA002352-PA|IPR006573|NEUZ,
IPR001841|Zinc finger, RING-type
(592 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_14887| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 8e-19
SB_20851| Best HMM Match : Cbl_N3 (HMM E-Value=0) 62 2e-09
SB_51713| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 5e-09
SB_56937| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 7e-07
SB_25082| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 4e-06
SB_18853| Best HMM Match : GATA (HMM E-Value=1.6) 46 1e-04
SB_14888| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 1e-04
SB_12329| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 6e-04
SB_16819| Best HMM Match : BIR (HMM E-Value=7.5e-30) 43 6e-04
SB_39478| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.004
SB_22639| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.010
SB_47201| Best HMM Match : SAM_1 (HMM E-Value=7.1e-09) 38 0.030
SB_21463| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.040
SB_42290| Best HMM Match : Band_41 (HMM E-Value=3.6e-09) 36 0.092
SB_31352| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.21
SB_53762| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.49
SB_6628| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09) 33 0.49
SB_3322| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.65
SB_20056| Best HMM Match : zf-C3HC4 (HMM E-Value=9e-11) 33 0.86
SB_35560| Best HMM Match : zf-B_box (HMM E-Value=1e-20) 32 1.1
SB_54221| Best HMM Match : zf-B_box (HMM E-Value=2.1e-17) 32 1.5
SB_51226| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09) 32 1.5
SB_48401| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.5
SB_33568| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.5
SB_52986| Best HMM Match : zf-C2H2 (HMM E-Value=0.0042) 31 2.0
SB_801| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.0
SB_29221| Best HMM Match : zf-C3HC4 (HMM E-Value=7.5e-10) 31 2.0
SB_11996| Best HMM Match : FYVE (HMM E-Value=0.004) 31 2.0
SB_11289| Best HMM Match : zf-TRAF (HMM E-Value=1.7e-08) 31 2.0
SB_4090| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.0
SB_46701| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17) 31 2.6
SB_26592| Best HMM Match : zf-B_box (HMM E-Value=1.3e-18) 31 2.6
SB_21628| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17) 31 2.6
SB_47995| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09) 31 2.6
SB_43880| Best HMM Match : zf-B_box (HMM E-Value=5.1e-15) 31 2.6
SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.6
SB_6802| Best HMM Match : zf-B_box (HMM E-Value=5e-18) 31 2.6
SB_56636| Best HMM Match : Toxin_4 (HMM E-Value=2.4) 31 3.5
SB_28248| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10) 31 3.5
SB_53640| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10) 31 3.5
SB_48027| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10) 31 3.5
SB_41431| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.5
SB_22421| Best HMM Match : zf-B_box (HMM E-Value=4e-17) 31 3.5
SB_18658| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.5
SB_54543| Best HMM Match : ResIII (HMM E-Value=1.9) 30 4.6
SB_50794| Best HMM Match : Cys_knot (HMM E-Value=2.2) 30 4.6
SB_23543| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.6
SB_21963| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.6
SB_57762| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.0
SB_50257| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.0
SB_18515| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.0
SB_944| Best HMM Match : zf-B_box (HMM E-Value=6.7e-15) 30 6.0
SB_35933| Best HMM Match : CIMR (HMM E-Value=6.3e-14) 30 6.0
>SB_14887| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 876
Score = 92.7 bits (220), Expect = 8e-19
Identities = 91/320 (28%), Positives = 140/320 (43%), Gaps = 40/320 (12%)
Query: 18 PQLKYQGTMTYGEVFDGNAPRTSCTGGAPNNLPPLTFHSVHGENIRVSRDGLTARRVE-- 75
P + GT T E +AP + T PN+ TF S HG+ + +S D A RV
Sbjct: 521 PAVTSTGTSTRSETPLPHAPAS--TAAVPND-NWFTFSSFHGDQVVISHDHRNAIRVNPL 577
Query: 76 -SFCKGVAFSARPVRVNEKVCIRFVEISNSWSGVIRFGFTSHDPATLAHALPKYACPDLT 134
F + S RP+R +E I + + WSG + G TS P L+ P DL
Sbjct: 578 VEFNNAIVMSQRPLRDDEMFEIIIEKQVDRWSGSLEAGVTSIAPDKLS--FPN-TITDLD 634
Query: 135 NKPG---------NWAKALGERFCETDNV-----LHYYVNSTGDVHFGVNGEDRGLFFSG 180
+ + A L C+ D + L + G +H+ VNGED G S
Sbjct: 635 HDTWMLSGSSVLQDGATILNGYGCDLDKLKENFRLGIMRKADGSLHYFVNGEDCGSAASS 694
Query: 181 VDTRSPLWALVDVYGNCTAVQFADPRVPSQRR--SNHSPADEDRLVS------GVRAMTV 232
V + ++A++D+YG C V D Q++ S+H +E R +S VR T
Sbjct: 695 VP--AGVYAIIDLYGQCVQVSVYDEDYVEQQKLPSSHPSQEESRALSVPPTVPPVRTDTA 752
Query: 233 EDLPPPRYQNPLAPLSLHRTKGRNVQVVNDRGIAARTEAEFCQGYVFTARPMRPGQTIVV 292
+ +P P H G+NV + N R A R +F +F+A+P+ + +
Sbjct: 753 DVIPGG------VPHGFHPCCGKNVSLENSRWTATRCR-DFSNALLFSAKPLHDDEIFEI 805
Query: 293 QILATETAYAGSLAIGLTSC 312
++ + ++GSL IG+TSC
Sbjct: 806 KVDRLSSQWSGSLGIGVTSC 825
Score = 70.1 bits (164), Expect = 5e-12
Identities = 76/291 (26%), Positives = 115/291 (39%), Gaps = 32/291 (10%)
Query: 51 PLTFHSVHGENIRVSRDGLTA---RRVESFCKGVAFSARPVRVNEKVCIRFVEISNSWSG 107
PL F S G+++R+ TA R +E F V + RP++ E + + W+G
Sbjct: 342 PLLFSSRCGKSVRLMNGNYTAFRPRALEEFNNAVVLTNRPIKHGELFEVYVDRQLDKWAG 401
Query: 108 VIRFGFTSHDPATLAHALPKYACPDLTN---KPGNWAKALGERFCET-----------DN 153
+ G T+H+PATL LP +T G G ET D
Sbjct: 402 SLEIGLTTHNPATL--ELPATITNLMTGAWVMSGGGMMKNGVTTIETYGRNLDDLKAGDR 459
Query: 154 VLHYYVNSTGDVHFGVNGEDRGLFFSGVDTRSPLWALVDVYGNCTAVQFADPRVPSQRRS 213
V Y G ++F +NGED GL + +P++ +VD+YG + A + + R
Sbjct: 460 VGLVY-KEDGSLNFFINGEDMGLAAQDIPVVTPVYGMVDLYG-----RSAQATITNGRPR 513
Query: 214 NHSPADEDRLVS-GVRAMTVEDLPPPRYQNPLAP----LSLHRTKGRNVQVVNDRGIAAR 268
P E + S G + LP P + G V + +D A R
Sbjct: 514 EDIPEGEPAVTSTGTSTRSETPLPHAPASTAAVPNDNWFTFSSFHGDQVVISHDHRNAIR 573
Query: 269 TE--AEFCQGYVFTARPMRPGQTIVVQILATETAYAGSLAIGLTSCDPGTL 317
EF V + RP+R + + I ++GSL G+TS P L
Sbjct: 574 VNPLVEFNNAIVMSQRPLRDDEMFEIIIEKQVDRWSGSLEAGVTSIAPDKL 624
Score = 46.4 bits (105), Expect = 6e-05
Identities = 46/161 (28%), Positives = 69/161 (42%), Gaps = 16/161 (9%)
Query: 54 FHSVHGENIRVSRDGLTARR---VESFCKGVAFSARPVRVNEKVCIRFVEISNSWSGVIR 110
FH HG I +S TARR F G+ F+ + +E + +R +WSG +
Sbjct: 7 FHERHGSLIFLSNGNRTARRRNPSAEFNNGLVFTKHMLGPSELLEVRIDRKITNWSGSMA 66
Query: 111 FGFTSHDPATL-----AHALPK-YACPDLTNKPGNWAKALGERFCETDNVL---HYYVNS 161
G T+ +P+ + A L Y + N L + D + V
Sbjct: 67 IGVTTANPSMIEIPSSATGLKNGYWIMSGMSVVKNGTAILDSYGTDLDELTEGDRVGVRR 126
Query: 162 TGD--VHFGVNGEDRGLFFSGVDTRSPLWALVDVYGNCTAV 200
TGD +HF VNG+D G+ S + L+ +VD+YG C V
Sbjct: 127 TGDGCLHFYVNGKDLGVAASEIP--GNLYGVVDLYGKCVEV 165
Score = 46.0 bits (104), Expect = 9e-05
Identities = 49/173 (28%), Positives = 76/173 (43%), Gaps = 23/173 (13%)
Query: 245 APLSLHRTKGRNVQVVNDRGIAARTE--AEFCQGYVFTARPMRPGQTIVVQILATETAYA 302
A H G + + N A R AEF G VFT + P + + V+I T ++
Sbjct: 3 ASCEFHERHGSLIFLSNGNRTARRRNPSAEFNNGLVFTKHMLGPSELLEVRIDRKITNWS 62
Query: 303 GSLAIGLTSCDPGTLRPCDLPDDAELLLDRPEYW------VVRRDAA---------NGLR 347
GS+AIG+T+ +P + ++P A L + YW VV+ A + L
Sbjct: 63 GSMAIGVTTANPSMI---EIPSSATGL--KNGYWIMSGMSVVKNGTAILDSYGTDLDELT 117
Query: 348 RGDELAVTLTLDGEVRVSRNGSNPVTVMHVDHTLRLWAFVDVYGATQKVRMLS 400
GD + V T DG + NG + + V + L+ VD+YG +V + S
Sbjct: 118 EGDRVGVRRTGDGCLHFYVNGKD-LGVAASEIPGNLYGVVDLYGKCVEVSVYS 169
Score = 44.8 bits (101), Expect = 2e-04
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 245 APLSLHRTKGRNVQVVNDRGIAARTEA--EFCQGYVFTARPMRPGQTIVVQILATETAYA 302
APL G++V+++N A R A EF V T RP++ G+ V + +A
Sbjct: 341 APLLFSSRCGKSVRLMNGNYTAFRPRALEEFNNAVVLTNRPIKHGELFEVYVDRQLDKWA 400
Query: 303 GSLAIGLTSCDPGTL 317
GSL IGLT+ +P TL
Sbjct: 401 GSLEIGLTTHNPATL 415
>SB_20851| Best HMM Match : Cbl_N3 (HMM E-Value=0)
Length = 695
Score = 61.7 bits (143), Expect = 2e-09
Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 8/113 (7%)
Query: 480 QSRPRNEVQCSSTQNSTNEQVQM-PNGHPEPLRLVERLPSTSRQHQPV----YSVIGE-G 533
Q+ P+N C + + E + P+G L + L + +H V Y + E G
Sbjct: 120 QTIPQNRSLCQALIDGAREGYYLYPDGQDLNPDLSQHLITPPDEHVKVTEEQYELYCEMG 179
Query: 534 PTGAECSICYENPIDSVLYMCGHMCMCYRCAVQQWRGKGGGQCPLCRAQIKDV 586
T C IC EN D + CGH+ MC+ C ++QW+ KGG CP CR+ IKD+
Sbjct: 180 STFQLCKICAENNKDVRIEPCGHL-MCHLC-LEQWQEKGGDGCPFCRSPIKDI 230
>SB_51713| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 60.1 bits (139), Expect = 5e-09
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 9/107 (8%)
Query: 480 QSRPRNEVQCSSTQNSTNEQVQMPNGHPEPLRLVERLPSTSRQHQPVYSVIGEGPTGAEC 539
Q+ P+N C + + + P P P+ + + + +Y +G T C
Sbjct: 329 QTIPQNRSLCQALIDGSQ-----PRPEPAPITPPDEHVKVTEEQYELYCEMGS--TFQLC 381
Query: 540 SICYENPIDSVLYMCGHMCMCYRCAVQQWRGKGGGQCPLCRAQIKDV 586
IC EN D + CGH+ MC+ C ++QW+ KGG CP CR+ +KD+
Sbjct: 382 KICAENNKDVRIEPCGHL-MCHLC-LEQWQEKGGDGCPFCRSPMKDI 426
>SB_56937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 761
Score = 52.8 bits (121), Expect = 7e-07
Identities = 27/74 (36%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 71 ARRVESFCKGVAFSARPVRVNEKVCIRFVEISNSWSGVIRFGFTSHDPATLAHALPKYAC 130
A R +SF V FS RP+ +E E WSG +R G T+H+P + +P Y
Sbjct: 212 ATRCKSFANAVVFSNRPLSTSETFVFEIYEQEQGWSGHVRCGVTTHNPNFI--KVPPYLL 269
Query: 131 PDLTNKPGNWAKAL 144
PDL W AL
Sbjct: 270 PDLAQMGTTWVFAL 283
Score = 40.7 bits (91), Expect = 0.003
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 260 VNDRGIAARTEAEFCQGYVFTARPMRPGQTIVVQILATETAYAGSLAIGLTSCDPGTLR- 318
V ++ +A R ++ F VF+ RP+ +T V +I E ++G + G+T+ +P ++
Sbjct: 206 VTEQTVATRCKS-FANAVVFSNRPLSTSETFVFEIYEQEQGWSGHVRCGVTTHNPNFIKV 264
Query: 319 -PCDLPDDAELLLDRPEYWVVRRDAANGLRRGDE 351
P LPD A++ WV +N GDE
Sbjct: 265 PPYLLPDLAQM----GTTWVFALKPSNNKPLGDE 294
Score = 30.3 bits (65), Expect = 4.6
Identities = 14/43 (32%), Positives = 27/43 (62%)
Query: 159 VNSTGDVHFGVNGEDRGLFFSGVDTRSPLWALVDVYGNCTAVQ 201
V+ G+++F +NG+ G + + + S L+ +DVYG+ AV+
Sbjct: 341 VSYAGNLYFYINGKKFGPCATDLPSDSELFVTLDVYGSTKAVK 383
>SB_25082| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 585
Score = 50.4 bits (115), Expect = 4e-06
Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
Query: 536 GAECSICYENPIDSVLYMCGHMCMCYRCAVQQWRGKGGGQCPLCRAQIKDVIRTYKS 592
G +C IC EN + VL CGH+C C CA Q QCP+CR I ++ Y+S
Sbjct: 535 GTQCVICLENQRNVVLLNCGHVCSCRTCAQQI------HQCPVCRGDIVRMVPIYQS 585
>SB_18853| Best HMM Match : GATA (HMM E-Value=1.6)
Length = 364
Score = 45.6 bits (103), Expect = 1e-04
Identities = 39/142 (27%), Positives = 63/142 (44%), Gaps = 15/142 (10%)
Query: 96 IRFVEISNSWSGVIRFGFTSHDPATL---AHALPKYACP-DLTNKP----GNWA-KALGE 146
IR ++ + WSG + G T HDP L + A CP + NK GN + LG
Sbjct: 1 IRVTKLESHWSGSLMVGLTDHDPECLNLPSTANSMKICPWIVVNKAVYINGNKVFEGLGR 60
Query: 147 RF--CETDNVLHYYVNSTGDVHFGVNGEDRGLFFSGVDTRSPLWALVDVYGNCTAVQFAD 204
+ + ++++ +H VNGED+G+ + + + +VD+YG+C V
Sbjct: 61 GLDDLRVGDTVGLMIDTSARLHVFVNGEDQGVVAEDLPAKPHM--VVDLYGSCQEVSIVT 118
Query: 205 PRVPSQRRSNHSPADEDRLVSG 226
QR A E++L G
Sbjct: 119 TVEQGQR--GGEVASEEKLAKG 138
Score = 35.1 bits (77), Expect = 0.16
Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 21/125 (16%)
Query: 292 VQILATETAYAGSLAIGLTSCDPGTLRPCDLPDDAELLLDRPEYWVVRRDAA--NG---- 345
+++ E+ ++GSL +GLT DP L +LP A + P W+V A NG
Sbjct: 1 IRVTKLESHWSGSLMVGLTDHDPECL---NLPSTANSMKICP--WIVVNKAVYINGNKVF 55
Query: 346 ---------LRRGDELAVTLTLDGEVRVSRNGSNPVTVMHVDHTLRLWAFVDVYGATQKV 396
LR GD + + + + V NG + V D + VD+YG+ Q+V
Sbjct: 56 EGLGRGLDDLRVGDTVGLMIDTSARLHVFVNGEDQGVVAE-DLPAKPHMVVDLYGSCQEV 114
Query: 397 RMLST 401
+++T
Sbjct: 115 SIVTT 119
>SB_14888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 396
Score = 45.6 bits (103), Expect = 1e-04
Identities = 39/142 (27%), Positives = 63/142 (44%), Gaps = 15/142 (10%)
Query: 96 IRFVEISNSWSGVIRFGFTSHDPATL---AHALPKYACP-DLTNKP----GNWA-KALGE 146
IR ++ + WSG + G T HDP L + A CP + NK GN + LG
Sbjct: 29 IRVTKLESHWSGSLMVGLTDHDPECLNLPSTANSMKICPWIVVNKAVYINGNKVFEGLGR 88
Query: 147 RF--CETDNVLHYYVNSTGDVHFGVNGEDRGLFFSGVDTRSPLWALVDVYGNCTAVQFAD 204
+ + ++++ +H VNGED+G+ + + + +VD+YG+C V
Sbjct: 89 GLDDLRVGDTVGLMIDTSARLHVFVNGEDQGVVAEDLPAKPHM--VVDLYGSCQEVSIVT 146
Query: 205 PRVPSQRRSNHSPADEDRLVSG 226
QR A E++L G
Sbjct: 147 TVEQGQR--GGEVASEEKLAKG 166
Score = 35.1 bits (77), Expect = 0.16
Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 21/125 (16%)
Query: 292 VQILATETAYAGSLAIGLTSCDPGTLRPCDLPDDAELLLDRPEYWVVRRDAA--NG---- 345
+++ E+ ++GSL +GLT DP L +LP A + P W+V A NG
Sbjct: 29 IRVTKLESHWSGSLMVGLTDHDPECL---NLPSTANSMKICP--WIVVNKAVYINGNKVF 83
Query: 346 ---------LRRGDELAVTLTLDGEVRVSRNGSNPVTVMHVDHTLRLWAFVDVYGATQKV 396
LR GD + + + + V NG + V D + VD+YG+ Q+V
Sbjct: 84 EGLGRGLDDLRVGDTVGLMIDTSARLHVFVNGEDQGVVAE-DLPAKPHMVVDLYGSCQEV 142
Query: 397 RMLST 401
+++T
Sbjct: 143 SIVTT 147
>SB_12329| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 43.2 bits (97), Expect = 6e-04
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
Query: 536 GAECSICYENPIDSVLYMCGHMCMCYRCAVQQWRGKGGGQCPLCRAQIKDVIRTY 590
G C +C + I++VL CGHM C +CA+ CP+CR I V + +
Sbjct: 143 GLRCKVCMDEQINAVLIPCGHMVCCEQCAMNL------EACPVCRGAIDHVQKAF 191
>SB_16819| Best HMM Match : BIR (HMM E-Value=7.5e-30)
Length = 514
Score = 43.2 bits (97), Expect = 6e-04
Identities = 36/135 (26%), Positives = 54/135 (40%), Gaps = 10/135 (7%)
Query: 455 IQATSQICLTGLQPLAQPSTCAQQFQSRPRNEVQCSSTQNSTNEQVQMPN-GHPEPLRLV 513
+Q +Q L P +QPS CA SR + S + +P+ + LR
Sbjct: 385 LQELTQALLDHEDPSSQPSNCAIHGNSRAFLDNLMPSQSLRPPGNLSLPSTNEKQVLRRT 444
Query: 514 ERLPSTSRQHQPVYSVIGEGPTGAE---CSICYENPIDSVLYMCGHMCMCYRCAVQQWRG 570
P +S S+ + E C IC + + V CGH+ C CA
Sbjct: 445 NSAPESSGSSPEGESLQQKLERMQEERLCKICMDAEVGIVFLPCGHLSCCPGCA------ 498
Query: 571 KGGGQCPLCRAQIKD 585
+G CP+CRA I++
Sbjct: 499 EGMELCPMCRAPIRE 513
>SB_39478| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 254
Score = 40.3 bits (90), Expect = 0.004
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Query: 538 ECSICYENPIDSVLYMCGHMCMCYRCAVQQW--RGKGGGQCPLCRAQI 583
EC+IC + D+V+ MCGH+ C+ C + +W CP+C+A I
Sbjct: 62 ECNICLDTARDAVISMCGHL-FCWPC-LHRWLETRPNRSMCPVCKAGI 107
>SB_22639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 956
Score = 39.1 bits (87), Expect = 0.010
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 517 PSTSRQHQPVY--SVIGEGPTGAECSICYENPIDSVLYMCGHMCMCYRCAVQQ-WRGKGG 573
PS+ R+ P+ S++ AECS+C++ P + + C H C C ++ KG
Sbjct: 74 PSSRRERSPLQMASILDSLRQEAECSLCHKTPSEPKILKCFH-TFCNECLTEKSAEFKGD 132
Query: 574 GQ---CPLCRAQI 583
G+ CP C+ +I
Sbjct: 133 GETFSCPSCKTRI 145
>SB_47201| Best HMM Match : SAM_1 (HMM E-Value=7.1e-09)
Length = 765
Score = 37.5 bits (83), Expect = 0.030
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 10/75 (13%)
Query: 520 SRQHQPVYSVIGEGP-----TGAECSICYENPIDSVLYMCGHMCMCYRCAVQQWRGKGGG 574
+ + +P+YS P T C +C P+ L C H C+C C +
Sbjct: 664 NEEEEPIYSPPETPPSQQRSTHGTCIVCQNLPVTRALLPCRHACVCGSCF-----SRLES 718
Query: 575 QCPLCRAQIKDVIRT 589
+CPLCR I+ T
Sbjct: 719 KCPLCRQVIRSYFLT 733
>SB_21463| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1042
Score = 37.1 bits (82), Expect = 0.040
Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 50 PPLTFHSVHGENIRVSRDGLTARRVESFCK-GVAFSARPVRVNEKVCIRFVEISNS 104
PP F HGE + V TA ++ + C AFSA V+E +CIR VE S
Sbjct: 46 PPYRFRVTHGEGLGVLAYKQTANKIHTACALEFAFSAFSCYVSEMLCIRKVETKAS 101
>SB_42290| Best HMM Match : Band_41 (HMM E-Value=3.6e-09)
Length = 474
Score = 35.9 bits (79), Expect = 0.092
Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 6/68 (8%)
Query: 523 HQPVYSVIGEGPTGAECSICYENPIDSVLYMCGHMCMCYRCAVQQWRGKGGGQCPLCRAQ 582
+Q +Y + C IC + +++ CGH+ C CA + CPLC+
Sbjct: 390 NQKIYFAMDTSYNDLTCQICMDAEVNTAFCPCGHVYCCQTCASNLY------YCPLCKTF 443
Query: 583 IKDVIRTY 590
I V R +
Sbjct: 444 ITFVQRIH 451
Score = 34.7 bits (76), Expect = 0.21
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 6/53 (11%)
Query: 538 ECSICYENPIDSVLYMCGHMCMCYRCAVQQWRGKGGGQCPLCRAQIKDVIRTY 590
+CS C N D++ CGH+ C RCA CPLC + + Y
Sbjct: 348 KCSKCNVNDCDTLFCPCGHLMFCSRCADNM------KFCPLCNESVNGNQKIY 394
>SB_31352| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 401
Score = 34.7 bits (76), Expect = 0.21
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 6/52 (11%)
Query: 539 CSICYENPIDSVLYMCGHMCMCYRCAVQQWRGKGGGQCPLCRAQIKDVIRTY 590
C IC + + + CGH+ C C+ +CPLCR+QI R +
Sbjct: 352 CQICMDVEVATAFCPCGHVVCCVECSAL------CKECPLCRSQITYAQRVF 397
>SB_53762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1010
Score = 33.5 bits (73), Expect = 0.49
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 539 CSICYENPIDSVLYM--CGHMCMCYRCAVQQWR 569
C IC ENP ++ L GH+C C+ CA + +R
Sbjct: 307 CIICLENPKNATLIHGDTGHLCCCWSCAQRLFR 339
>SB_6628| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09)
Length = 89
Score = 33.5 bits (73), Expect = 0.49
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 539 CSICYENPIDSVLYMCGHMCMCYRCAVQ---QWRGKGGGQCPLCRAQIKDVIRT 589
CSIC E+ D + C H C C + G+G CPLC+A+ + I+T
Sbjct: 15 CSICIEHFNDPRVLPCFHS-FCRHCLEELAVHSEGRGKLVCPLCKAEFQKWIQT 67
>SB_3322| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 777
Score = 33.1 bits (72), Expect = 0.65
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 538 ECSICYENPIDSVLYMCGHMCMCYRCA 564
EC IC + D+++ C H+C+C CA
Sbjct: 248 ECVICMSDFRDTLILPCRHLCLCKACA 274
>SB_20056| Best HMM Match : zf-C3HC4 (HMM E-Value=9e-11)
Length = 471
Score = 32.7 bits (71), Expect = 0.86
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 538 ECSICYENPIDSVLYMCGHMCMCYRCAVQQWRGKGGGQC 576
EC +C + +D V +CGH C C ++ GK +C
Sbjct: 21 ECGLCGDFYVDPVTILCGH-TYCLACIKDEFTGKNCKKC 58
Score = 32.7 bits (71), Expect = 0.86
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 538 ECSICYENPIDSVLYMCGHMCMCYRCAVQQWRGKGGGQCPLCRAQIKDVI 587
EC +C+ ++ V +CGH C C + + +CP CRA + ++
Sbjct: 329 ECKLCFNLLLEPVTSLCGH-SFCRDCLYRSLDHR--VECPCCRAPLTKIL 375
>SB_35560| Best HMM Match : zf-B_box (HMM E-Value=1e-20)
Length = 470
Score = 32.3 bits (70), Expect = 1.1
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Query: 539 CSICYENPIDSVLYMCGHMCMCYRCA--VQQWRGKGGGQCPLCRAQ 582
C+IC E+ D L C H C C + + GKG CPLC+ +
Sbjct: 15 CAICIEHFTDPRLLPCLHT-FCRHCLEDLAEHSGKGKLVCPLCKVE 59
>SB_54221| Best HMM Match : zf-B_box (HMM E-Value=2.1e-17)
Length = 455
Score = 31.9 bits (69), Expect = 1.5
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 539 CSICYENPIDSVLYMCGH-MCM-CYRCAVQQWRGKGGGQCPLCRAQIK 584
CSIC E+ D + C H C+ C G+G CPLC+A+ +
Sbjct: 15 CSICIEHFNDPRVLPCFHSFCLHCLEELAVHSEGRGKLVCPLCKAEFQ 62
>SB_51226| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09)
Length = 82
Score = 31.9 bits (69), Expect = 1.5
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Query: 539 CSICYENPIDSVLYMCGHMCMCYRCAVQ---QWRGKGGGQCPLCRAQIKDVI 587
CSIC E+ D + C H C C + G+G CPLC+A+ + +
Sbjct: 15 CSICIEHFNDPRVLPCFHS-FCRHCLEELAVHSEGRGKLVCPLCKAEFQSAL 65
>SB_48401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 694
Score = 31.9 bits (69), Expect = 1.5
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 539 CSICYENPIDSVLYMCGHMCMCYRCAVQQWRGKGGGQCPLCRAQIKDV 586
C +C E S + C H +CY+C V+ K C +CR+++ V
Sbjct: 14 CVVCCEEIEFSAVGKCDHP-VCYKCCVRMRVLKQENYCTVCRSELSMV 60
>SB_33568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1555
Score = 31.9 bits (69), Expect = 1.5
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 539 CSICYENPIDSVLYMCGHMCMCYRCAVQQWRGK 571
C+IC+ D +L CGH C +C +Q+WR +
Sbjct: 30 CAICHIVVKDPILTSCGH-SYC-KCCIQKWRNR 60
>SB_52986| Best HMM Match : zf-C2H2 (HMM E-Value=0.0042)
Length = 623
Score = 31.5 bits (68), Expect = 2.0
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 539 CSICYENPIDSVLYMCGHMCMCYRCAVQQWRGKGGGQCPLCRAQI 583
C +C E S + C H +CY+C V+ K C +CR+++
Sbjct: 14 CVVCCEEIEFSAVGKCDHP-VCYKCCVRMRVLKQENYCTVCRSEL 57
>SB_801| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 402
Score = 31.5 bits (68), Expect = 2.0
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 10/87 (11%)
Query: 480 QSRPRNEVQCSSTQNSTNEQVQMPNGHPEPLRLVER--LPSTSRQHQPVYSVIGEGPTGA 537
QS + + T ++ +E+V +P PE ++ E + S R H + + +
Sbjct: 203 QSYVHYDAVATCTMSTRSEEVSIPA--PESIKSTEHVLMCSCGRGHSTSKMKLSCNASKS 260
Query: 538 ECSICYENPIDSVLYMCGHMCMCYRCA 564
C CY+ LY CG C C+ CA
Sbjct: 261 RCR-CYQQ-----LYGCGDHCKCFYCA 281
>SB_29221| Best HMM Match : zf-C3HC4 (HMM E-Value=7.5e-10)
Length = 337
Score = 31.5 bits (68), Expect = 2.0
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Query: 539 CSICYENPIDSVLYMCGHMCMCYRCAVQQWRGKGGGQCPLCRAQIKDVIR 588
C IC + ++ V+ C H C C Q + + QCP+CR +I R
Sbjct: 37 CPICLQLLVEPVVLPCEHE-FCKMCFTQNVQ-EANLQCPMCRIRISSWAR 84
>SB_11996| Best HMM Match : FYVE (HMM E-Value=0.004)
Length = 610
Score = 31.5 bits (68), Expect = 2.0
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 539 CSICYENPIDSVLYMCGHMCMCYR 562
C +C +N ID VL CGHM ++
Sbjct: 285 CKVCMDNLIDCVLLECGHMLFNFK 308
>SB_11289| Best HMM Match : zf-TRAF (HMM E-Value=1.7e-08)
Length = 230
Score = 31.5 bits (68), Expect = 2.0
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Query: 532 EGPTGAE--CSICYENPIDSVLYMCGHMCMCYRCAVQQWRGKGGGQCPLCRAQI 583
EGP C IC D+V GH+ C C V + G G CPL R+++
Sbjct: 10 EGPADPNIICPICQFIIEDAVCCPQGHI-FCRSCVVVHLQQFGNGNCPLDRSEL 62
>SB_4090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2342
Score = 31.5 bits (68), Expect = 2.0
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 539 CSICYENPIDSVLYMCGHMCMCYRCAVQ---QWRGKGGGQCPLCRAQIK 584
CS+C E+ D + C H C C + GKG CPLC+A+ +
Sbjct: 15 CSLCIEHFNDPRVLPCFHS-FCRHCLEELAVHSEGKGKLVCPLCKAEFQ 62
>SB_46701| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17)
Length = 442
Score = 31.1 bits (67), Expect = 2.6
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 539 CSICYENPIDSVLYMCGHMCMCYRCAVQ---QWRGKGGGQCPLCRAQIK 584
CSIC E+ D + C H C C + G+G CPLC+A+ +
Sbjct: 15 CSICIEHFNDPRVLPCFHS-FCRHCLEELAVHSEGRGKLVCPLCKAEFQ 62
>SB_26592| Best HMM Match : zf-B_box (HMM E-Value=1.3e-18)
Length = 355
Score = 31.1 bits (67), Expect = 2.6
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 539 CSICYENPIDSVLYMCGHMCMCYRCAVQ---QWRGKGGGQCPLCRAQIK 584
CSIC E+ D + C H C C + G+G CPLC+A+ +
Sbjct: 15 CSICIEHFNDPRVLPCFHS-FCRHCLEELAVHSEGRGKLVCPLCKAEFQ 62
>SB_21628| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17)
Length = 291
Score = 31.1 bits (67), Expect = 2.6
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 539 CSICYENPIDSVLYMCGHMCMCYRCAVQ---QWRGKGGGQCPLCRAQIK 584
CSIC E+ D + C H C C + G+G CPLC+A+ +
Sbjct: 15 CSICIEHFNDPRVLPCFHS-FCRHCLEELAVHSEGRGKLVCPLCKAEFQ 62
>SB_47995| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09)
Length = 745
Score = 31.1 bits (67), Expect = 2.6
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 539 CSICYENPIDSVLYMCGHMCMCYRCAVQ---QWRGKGGGQCPLCRAQIK 584
CSIC E+ D + C H C C + G+G CPLC+A+ +
Sbjct: 15 CSICIEHFNDPRVLPCFHS-FCRHCLEELAVHSEGRGKLVCPLCKAEFQ 62
>SB_43880| Best HMM Match : zf-B_box (HMM E-Value=5.1e-15)
Length = 405
Score = 31.1 bits (67), Expect = 2.6
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 539 CSICYENPIDSVLYMCGHMCMCYRCAVQ---QWRGKGGGQCPLCRAQIK 584
CSIC E+ D + C H C C + G+G CPLC+A+ +
Sbjct: 14 CSICIEHFNDPRVLPCFHS-FCRHCLEELAVHSEGRGKLVCPLCKAEFQ 61
>SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 888
Score = 31.1 bits (67), Expect = 2.6
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Query: 539 CSICYENPIDSVLYMCGHMCMCYRCAVQ---QWRGKGGGQCPLCRAQIKDVIRTYKS 592
CSIC E+ D + C H C C + G+G CPLC+A+ + KS
Sbjct: 14 CSICIEHFNDPRVLPCLHS-FCRHCLEELAVHSEGRGKLVCPLCKAEFQKFWNYVKS 69
>SB_6802| Best HMM Match : zf-B_box (HMM E-Value=5e-18)
Length = 316
Score = 31.1 bits (67), Expect = 2.6
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 539 CSICYENPIDSVLYMCGHMCMCYRCAVQ---QWRGKGGGQCPLCRAQIK 584
CSIC E+ D + C H C C + G+G CPLC+A+ +
Sbjct: 15 CSICIEHLNDPRVLPCLHS-FCRHCLEELAVHSEGRGKLVCPLCKAEFQ 62
>SB_56636| Best HMM Match : Toxin_4 (HMM E-Value=2.4)
Length = 434
Score = 30.7 bits (66), Expect = 3.5
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 371 PVTVMHVDHTLRLWAFVDVYGATQKVRMLSTQTVAQTPPPQL 412
P + +DH+L W VY +VR L+ Q V TPPP +
Sbjct: 374 PRRLFIIDHSLEGWITNAVYTGISRVR-LADQIVRVTPPPPM 414
>SB_28248| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)
Length = 119
Score = 30.7 bits (66), Expect = 3.5
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 539 CSICYENPIDSVLYMCGHMCMCYRCAVQ---QWRGKGGGQCPLCRAQIK 584
CSIC E+ D + C H C C + G+G CPLC+A+ +
Sbjct: 15 CSICIEHFNDPRVLPCLHS-FCRHCLEELAVHSEGRGKLVCPLCKAEFQ 62
>SB_53640| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)
Length = 62
Score = 30.7 bits (66), Expect = 3.5
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 539 CSICYENPIDSVLYMCGHMCMCYRCAVQ---QWRGKGGGQCPLCRAQIK 584
CSIC E+ D + C H C C + G+G CPLC+A+ +
Sbjct: 15 CSICIEHFNDPRVLPCLHS-FCRHCLEELAVHSEGRGKLVCPLCKAEFQ 62
>SB_48027| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)
Length = 62
Score = 30.7 bits (66), Expect = 3.5
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 539 CSICYENPIDSVLYMCGHMCMCYRCAVQ---QWRGKGGGQCPLCRAQIK 584
CSIC E+ D + C H C C + G+G CPLC+A+ +
Sbjct: 15 CSICIEHFNDPRVLPCLHS-FCRHCLEELAVHSEGRGKLVCPLCKAEFQ 62
>SB_41431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 667
Score = 30.7 bits (66), Expect = 3.5
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 539 CSICYENPIDSVLYMCGHMCMCYRCAVQ---QWRGKGGGQCPLCRAQIK 584
CSIC E+ D + C H C C + G+G CPLC+A+ +
Sbjct: 20 CSICIEHFDDPRVLPCLHS-FCRHCLEELAVHSEGRGKLVCPLCKAEFQ 67
>SB_22421| Best HMM Match : zf-B_box (HMM E-Value=4e-17)
Length = 463
Score = 30.7 bits (66), Expect = 3.5
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 539 CSICYENPIDSVLYMCGHMCMCYRCAVQ---QWRGKGGGQCPLCRAQIK 584
CSIC E+ D + C H C C + G+G CPLC+A+ +
Sbjct: 15 CSICIEHFNDPRVLPCLHS-FCRHCLEELAVHSEGRGKLVCPLCKAEFQ 62
>SB_18658| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 337
Score = 30.7 bits (66), Expect = 3.5
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Query: 538 ECSICYENPIDSVLYMCGHMCMCYRCAVQQWRGKGGGQCPLCRAQI 583
+C IC+ D ++ CGH+ C +C V W + G CPL Q+
Sbjct: 56 KCGICFGVLEDPLVTTCGHV-FCSQCLV-HWIAE-NGTCPLTCEQL 98
>SB_54543| Best HMM Match : ResIII (HMM E-Value=1.9)
Length = 521
Score = 30.3 bits (65), Expect = 4.6
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 370 NPVTVMHVDHTLRLWAFVDVYGATQKVRMLSTQTVAQTPPP 410
NP + +DH+L W VY +VR L+ Q V PPP
Sbjct: 441 NPRRLFIIDHSLEGWITNAVYTGISRVR-LADQIVRVIPPP 480
>SB_50794| Best HMM Match : Cys_knot (HMM E-Value=2.2)
Length = 396
Score = 30.3 bits (65), Expect = 4.6
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 370 NPVTVMHVDHTLRLWAFVDVYGATQKVRMLSTQTVAQTPPP 410
NP + +DH+L W VY +VR L+ Q V PPP
Sbjct: 302 NPRRLFIIDHSLEGWITNAVYTGISRVR-LADQIVRVIPPP 341
>SB_23543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 869
Score = 30.3 bits (65), Expect = 4.6
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 370 NPVTVMHVDHTLRLWAFVDVYGATQKVRMLSTQTVAQTPP 409
NP+ + +DH+L+ W VY +VR L+ Q V PP
Sbjct: 719 NPIRLFIIDHSLQGWITNAVYTGISRVR-LADQIVRVIPP 757
>SB_21963| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 504
Score = 30.3 bits (65), Expect = 4.6
Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 295 LATETAYAGSLAIGLTSCDPGTLRPCDLPDDAELLLDRPE 334
+A+ETA A + I + P T D P AEL++DR E
Sbjct: 154 IASETAAAAAAGITTLATPPTTAPVIDTPAVAELIIDRAE 193
>SB_57762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 29.9 bits (64), Expect = 6.0
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 539 CSICYENPIDSVLYMCGHMCMCYRCAVQ---QWRGKGGGQCPLCRAQIK 584
CS+C E+ D + C H C C + G+G CPLC+A+ +
Sbjct: 15 CSLCIEHFNDPRVLPCLHS-FCRHCLEELAVHSEGRGKLVCPLCKAEFQ 62
>SB_50257| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 136
Score = 29.9 bits (64), Expect = 6.0
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 35 NAPRTSCTGGAPNNLPPLTFHSVHGEN--IRVSRDGLTARRVESFCKGV 81
N P +C P ++ + F+ +HGEN I+V +G+T R + + C+ +
Sbjct: 42 NVPLQNCRAKHPISMATIDFNKLHGENSYIKVPGNGIT-RYLFNLCQPI 89
>SB_18515| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 29.9 bits (64), Expect = 6.0
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 539 CSICYENPIDSVLYMCGHMCMCYRCAVQ---QWRGKGGGQCPLCRAQIK 584
CS+C E+ D + C H C C + G+G CPLC+A+ +
Sbjct: 15 CSLCIEHFNDPRVLPCLHS-FCRHCLEELAVHSEGRGKLVCPLCKAEFQ 62
>SB_944| Best HMM Match : zf-B_box (HMM E-Value=6.7e-15)
Length = 629
Score = 29.9 bits (64), Expect = 6.0
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 539 CSICYENPIDSVLYMCGHMCMCYRCAVQ---QWRGKGGGQCPLCRAQIK 584
CS+C E+ D + C H C C + GKG CPLC+++ +
Sbjct: 135 CSLCIEHFNDPRVLPCLHS-FCRHCLEELAVHSEGKGKLVCPLCKSEFQ 182
>SB_35933| Best HMM Match : CIMR (HMM E-Value=6.3e-14)
Length = 644
Score = 29.9 bits (64), Expect = 6.0
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 35 NAPRTSCTGGAPNNLPPLTFHSVHGEN--IRVSRDGLTARRVESFCKGV 81
N P +C P ++ + F+ +HGEN I+V +G+T R + + C+ +
Sbjct: 550 NVPLQNCRAKHPISMATIDFNKLHGENSYIKVPGNGIT-RYLFNLCQPI 597
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.319 0.135 0.420
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,527,717
Number of Sequences: 59808
Number of extensions: 921717
Number of successful extensions: 2011
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 1964
Number of HSP's gapped (non-prelim): 69
length of query: 592
length of database: 16,821,457
effective HSP length: 86
effective length of query: 506
effective length of database: 11,677,969
effective search space: 5909052314
effective search space used: 5909052314
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 63 (29.5 bits)
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