Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002352-TA|BGIBMGA002352-PA|IPR006573|NEUZ,
IPR001841|Zinc finger, RING-type
(592 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40945-5|AAS80344.1| 617|Caenorhabditis elegans Hypothetical pr... 294 1e-79
U40945-8|AAM54201.1| 170|Caenorhabditis elegans Hypothetical pr... 153 3e-37
U40945-7|AAS80345.1| 196|Caenorhabditis elegans Hypothetical pr... 153 3e-37
U40945-6|AAS80346.1| 437|Caenorhabditis elegans Hypothetical pr... 130 3e-30
Z70205-2|CAA94116.1| 529|Caenorhabditis elegans Hypothetical pr... 46 6e-05
X89223-1|CAA61507.1| 582|Caenorhabditis elegans sli-1 protein. 46 8e-05
U58730-5|AAK84546.1| 582|Caenorhabditis elegans Suppressor of l... 46 8e-05
U58730-4|AAK84547.1| 565|Caenorhabditis elegans Suppressor of l... 46 8e-05
U58730-3|AAT92069.1| 523|Caenorhabditis elegans Suppressor of l... 46 8e-05
Z83127-3|CAB05629.2| 291|Caenorhabditis elegans Hypothetical pr... 42 0.002
Z46787-7|CAA86745.1| 235|Caenorhabditis elegans Hypothetical pr... 39 0.009
Z70208-6|CAA94134.1| 201|Caenorhabditis elegans Hypothetical pr... 38 0.026
U23511-12|AAC46798.2| 610|Caenorhabditis elegans Hypothetical p... 38 0.026
U46753-9|AAA85765.1| 226|Caenorhabditis elegans Hypothetical pr... 37 0.035
Z81131-4|CAD01083.1| 415|Caenorhabditis elegans Hypothetical pr... 37 0.046
AL132876-13|CAD21663.1| 214|Caenorhabditis elegans Hypothetical... 36 0.081
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr... 36 0.11
AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical ... 36 0.11
Z92803-1|CAB07242.2| 384|Caenorhabditis elegans Hypothetical pr... 34 0.33
U10402-5|AAA19066.2| 650|Caenorhabditis elegans Tryptophanyl (w... 34 0.33
AL032639-3|CAA21635.1| 283|Caenorhabditis elegans Hypothetical ... 34 0.33
AF304126-1|AAG50239.1| 384|Caenorhabditis elegans RING and zinc... 34 0.33
Z81505-1|CAB04122.1| 673|Caenorhabditis elegans Hypothetical pr... 33 0.57
Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical pr... 33 0.57
Z81131-2|CAB03425.1| 349|Caenorhabditis elegans Hypothetical pr... 33 0.75
Z66495-6|CAA91275.2| 547|Caenorhabditis elegans Hypothetical pr... 32 0.99
U67953-1|AAQ91892.1| 398|Caenorhabditis elegans Hypothetical pr... 32 0.99
AF039047-9|AAB94229.2| 400|Caenorhabditis elegans Hypothetical ... 32 0.99
Z93384-1|CAB07633.3| 342|Caenorhabditis elegans Hypothetical pr... 31 2.3
U41273-2|AAA82454.2| 306|Caenorhabditis elegans Hypothetical pr... 31 2.3
Z70287-8|CAA94301.2| 1717|Caenorhabditis elegans Hypothetical pr... 31 3.0
U64842-9|AAB37081.2| 458|Caenorhabditis elegans Hypothetical pr... 31 3.0
U39853-8|AAQ81277.1| 1609|Caenorhabditis elegans Hypothetical pr... 31 3.0
U39853-7|AAM54194.1| 1614|Caenorhabditis elegans Hypothetical pr... 31 3.0
U39853-6|AAM54193.2| 1632|Caenorhabditis elegans Hypothetical pr... 31 3.0
U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical pr... 31 3.0
AJ288951-1|CAB97346.1| 458|Caenorhabditis elegans Pellino prote... 31 3.0
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 30 4.0
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 30 4.0
U97193-14|AAB52442.2| 381|Caenorhabditis elegans Ring finger pr... 30 4.0
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 30 4.0
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 30 4.0
U53337-2|AAA96184.1| 639|Caenorhabditis elegans Hypothetical pr... 30 5.3
Z81547-2|CAB04460.1| 209|Caenorhabditis elegans Hypothetical pr... 29 9.2
U39996-8|AAA81094.2| 1102|Caenorhabditis elegans Hypothetical pr... 29 9.2
AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical ... 29 9.2
>U40945-5|AAS80344.1| 617|Caenorhabditis elegans Hypothetical
protein F10D7.5a protein.
Length = 617
Score = 294 bits (722), Expect = 1e-79
Identities = 143/384 (37%), Positives = 221/384 (57%), Gaps = 16/384 (4%)
Query: 46 PNNLPPLTFHSVHGENIRVSRDGLTARRVESFCKGVAFSARPVRVNEKVCIRFVEISNSW 105
P PL FH +HG N+ + ++G A+R ESFCKG+AFS RP+ ++E VC+R E+ +W
Sbjct: 33 PGTRGPLQFHCIHGSNVVILKNGRLAKRRESFCKGLAFSNRPIEIDENVCLRLCEVGTNW 92
Query: 106 SGVIRFGFTSHDPATLAHA-LPKYACPDLTNKPGNWAKALGERFCETDNVLHYYVNSTGD 164
SGV+RFG T+ DP +P +ACPDLT K G WAKAL ER+ N+LH+YVN+ G+
Sbjct: 93 SGVLRFGVTNDDPEMYRDIPVPTFACPDLTTKDGYWAKALPERYSNEGNILHFYVNAHGE 152
Query: 165 VHFGVNGEDRGLFFSGVDTRSPLWALVDVYGNCTAVQFADPRVPSQRRSNHSP---ADED 221
+ +G+NG +G+F +G++ P+W ++D+YGN V+ D RR+ P A
Sbjct: 153 LFYGINGSQKGMFLTGINVHRPMWLILDIYGNSVGVEIIDASEFRPRRNAPPPPIIAVPP 212
Query: 222 RLVSGVRAMTVEDL---PPPRYQNPLA---------PLSLHRTKGRNVQVVNDRGIAART 269
R + + + P ++ +A PL H KG ++ + R IA R
Sbjct: 213 RPAPARTSPAITAIALTPSSASESSMASRTDDSGKRPLRFHYVKGCHITLNPSRNIATRD 272
Query: 270 EAEFCQGYVFTARPMRPGQTIVVQILATETAYAGSLAIGLTSCDPGTLRPCDLPDDAELL 329
+AE+ QGYVFT RP++ + +++ I + Y G LA G+T CDP ++R LPDD+ L
Sbjct: 273 QAEYSQGYVFTERPIKNNEKVMIMISQVQRLYEGGLAFGVTCCDPASIRVAGLPDDSSDL 332
Query: 330 LDRPEYWVVRRDAANGLRRGDELAVTLTLDGEVRVSRNGSNPVTVMHVDHTLRLWAFVDV 389
++ PEYWV +D A + L+ +T GEV+ + + T ++VD++L L+ + DV
Sbjct: 333 VEMPEYWVGIKDIALQPKANSILSFWITDSGEVKFEIDSNGARTCLYVDNSLELYMYFDV 392
Query: 390 YGATQKVRMLSTQTVAQTPPPQLR 413
YG+T ++ML V ++ P R
Sbjct: 393 YGSTLSIKMLGYIQVPRSHSPAAR 416
Score = 79.4 bits (187), Expect = 7e-15
Identities = 32/57 (56%), Positives = 42/57 (73%), Gaps = 2/57 (3%)
Query: 536 GAECSICYENPIDSVLYMCGHMCMCYRCAVQQWRGKGGGQCPLCRAQIKDVIRTYKS 592
G EC+IC + P++SVLY CGHMCMC+ C + K G CP+CRA ++DVI+TYKS
Sbjct: 563 GDECTICMDAPVNSVLYTCGHMCMCFECGRRLLTTK--GTCPICRAPVQDVIKTYKS 617
Score = 70.1 bits (164), Expect = 4e-12
Identities = 55/195 (28%), Positives = 94/195 (48%), Gaps = 14/195 (7%)
Query: 51 PLTFHSVHGENIRVSRDGLTARRVES-FCKGVAFSARPVRVNEKVCIRFVEISNSWSGVI 109
PL FH V G +I ++ A R ++ + +G F+ RP++ NEKV I ++ + G +
Sbjct: 249 PLRFHYVKGCHITLNPSRNIATRDQAEYSQGYVFTERPIKNNEKVMIMISQVQRLYEGGL 308
Query: 110 RFGFTSHDPATLAHALPKYACPDLTNKPGNWA--KALGERFCETDNVLHYYVNSTGDVHF 167
FG T DPA++ A DL P W K + + + +++L +++ +G+V F
Sbjct: 309 AFGVTCCDPASIRVAGLPDDSSDLVEMPEYWVGIKDIALQ-PKANSILSFWITDSGEVKF 367
Query: 168 GV--NGEDRGLFFSGVDTRSPLWALVDVYGNCTAVQFAD-PRVPSQRRSNHSPADEDRLV 224
+ NG L+ VD L+ DVYG+ +++ +VP +HSPA + +
Sbjct: 368 EIDSNGARTCLY---VDNSLELYMYFDVYGSTLSIKMLGYIQVP----RSHSPAARETVK 420
Query: 225 SGVRAMTVEDLPPPR 239
G + L PR
Sbjct: 421 EGPSTRNEQPLSIPR 435
>U40945-8|AAM54201.1| 170|Caenorhabditis elegans Hypothetical
protein F10D7.5e protein.
Length = 170
Score = 153 bits (371), Expect = 3e-37
Identities = 63/130 (48%), Positives = 89/130 (68%), Gaps = 1/130 (0%)
Query: 46 PNNLPPLTFHSVHGENIRVSRDGLTARRVESFCKGVAFSARPVRVNEKVCIRFVEISNSW 105
P PL FH +HG N+ + ++G A+R ESFCKG+AFS RP+ ++E VC+R E+ +W
Sbjct: 33 PGTRGPLQFHCIHGSNVVILKNGRLAKRRESFCKGLAFSNRPIEIDENVCLRLCEVGTNW 92
Query: 106 SGVIRFGFTSHDPATLAH-ALPKYACPDLTNKPGNWAKALGERFCETDNVLHYYVNSTGD 164
SGV+RFG T+ DP +P +ACPDLT K G WAKAL ER+ N+LH+YVN+ G+
Sbjct: 93 SGVLRFGVTNDDPEMYRDIPVPTFACPDLTTKDGYWAKALPERYSNEGNILHFYVNAHGE 152
Query: 165 VHFGVNGEDR 174
+ +G+NG +
Sbjct: 153 LFYGINGSQK 162
Score = 51.6 bits (118), Expect = 2e-06
Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 3/125 (2%)
Query: 246 PLSLHRTKGRNVQVVNDRGIAARTEAEFCQGYVFTARPMRPGQTIVVQILATETAYAGSL 305
PL H G NV ++ + +A R E+ FC+G F+ RP+ + + +++ T ++G L
Sbjct: 38 PLQFHCIHGSNVVILKNGRLAKRRES-FCKGLAFSNRPIEIDENVCLRLCEVGTNWSGVL 96
Query: 306 AIGLTSCDPGTLRPCDLPDDA-ELLLDRPEYWVVRRDAANGLRRGDELAVTLTLDGEVRV 364
G+T+ DP R +P A L + YW + G+ L + GE+
Sbjct: 97 RFGVTNDDPEMYRDIPVPTFACPDLTTKDGYW-AKALPERYSNEGNILHFYVNAHGELFY 155
Query: 365 SRNGS 369
NGS
Sbjct: 156 GINGS 160
>U40945-7|AAS80345.1| 196|Caenorhabditis elegans Hypothetical
protein F10D7.5b protein.
Length = 196
Score = 153 bits (371), Expect = 3e-37
Identities = 63/130 (48%), Positives = 89/130 (68%), Gaps = 1/130 (0%)
Query: 46 PNNLPPLTFHSVHGENIRVSRDGLTARRVESFCKGVAFSARPVRVNEKVCIRFVEISNSW 105
P PL FH +HG N+ + ++G A+R ESFCKG+AFS RP+ ++E VC+R E+ +W
Sbjct: 33 PGTRGPLQFHCIHGSNVVILKNGRLAKRRESFCKGLAFSNRPIEIDENVCLRLCEVGTNW 92
Query: 106 SGVIRFGFTSHDPATLAH-ALPKYACPDLTNKPGNWAKALGERFCETDNVLHYYVNSTGD 164
SGV+RFG T+ DP +P +ACPDLT K G WAKAL ER+ N+LH+YVN+ G+
Sbjct: 93 SGVLRFGVTNDDPEMYRDIPVPTFACPDLTTKDGYWAKALPERYSNEGNILHFYVNAHGE 152
Query: 165 VHFGVNGEDR 174
+ +G+NG +
Sbjct: 153 LFYGINGSQK 162
Score = 51.6 bits (118), Expect = 2e-06
Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 3/125 (2%)
Query: 246 PLSLHRTKGRNVQVVNDRGIAARTEAEFCQGYVFTARPMRPGQTIVVQILATETAYAGSL 305
PL H G NV ++ + +A R E+ FC+G F+ RP+ + + +++ T ++G L
Sbjct: 38 PLQFHCIHGSNVVILKNGRLAKRRES-FCKGLAFSNRPIEIDENVCLRLCEVGTNWSGVL 96
Query: 306 AIGLTSCDPGTLRPCDLPDDA-ELLLDRPEYWVVRRDAANGLRRGDELAVTLTLDGEVRV 364
G+T+ DP R +P A L + YW + G+ L + GE+
Sbjct: 97 RFGVTNDDPEMYRDIPVPTFACPDLTTKDGYW-AKALPERYSNEGNILHFYVNAHGELFY 155
Query: 365 SRNGS 369
NGS
Sbjct: 156 GINGS 160
>U40945-6|AAS80346.1| 437|Caenorhabditis elegans Hypothetical
protein F10D7.5c protein.
Length = 437
Score = 130 bits (314), Expect = 3e-30
Identities = 62/168 (36%), Positives = 98/168 (58%)
Query: 246 PLSLHRTKGRNVQVVNDRGIAARTEAEFCQGYVFTARPMRPGQTIVVQILATETAYAGSL 305
PL H KG ++ + R IA R +AE+ QGYVFT RP++ + +++ I + Y G L
Sbjct: 69 PLRFHYVKGCHITLNPSRNIATRDQAEYSQGYVFTERPIKNNEKVMIMISQVQRLYEGGL 128
Query: 306 AIGLTSCDPGTLRPCDLPDDAELLLDRPEYWVVRRDAANGLRRGDELAVTLTLDGEVRVS 365
A G+T CDP ++R LPDD+ L++ PEYWV +D A + L+ +T GEV+
Sbjct: 129 AFGVTCCDPASIRVAGLPDDSSDLVEMPEYWVGIKDIALQPKANSILSFWITDSGEVKFE 188
Query: 366 RNGSNPVTVMHVDHTLRLWAFVDVYGATQKVRMLSTQTVAQTPPPQLR 413
+ + T ++VD++L L+ + DVYG+T ++ML V ++ P R
Sbjct: 189 IDSNGARTCLYVDNSLELYMYFDVYGSTLSIKMLGYIQVPRSHSPAAR 236
Score = 79.4 bits (187), Expect = 7e-15
Identities = 32/57 (56%), Positives = 42/57 (73%), Gaps = 2/57 (3%)
Query: 536 GAECSICYENPIDSVLYMCGHMCMCYRCAVQQWRGKGGGQCPLCRAQIKDVIRTYKS 592
G EC+IC + P++SVLY CGHMCMC+ C + K G CP+CRA ++DVI+TYKS
Sbjct: 383 GDECTICMDAPVNSVLYTCGHMCMCFECGRRLLTTK--GTCPICRAPVQDVIKTYKS 437
Score = 70.1 bits (164), Expect = 4e-12
Identities = 55/195 (28%), Positives = 94/195 (48%), Gaps = 14/195 (7%)
Query: 51 PLTFHSVHGENIRVSRDGLTARRVES-FCKGVAFSARPVRVNEKVCIRFVEISNSWSGVI 109
PL FH V G +I ++ A R ++ + +G F+ RP++ NEKV I ++ + G +
Sbjct: 69 PLRFHYVKGCHITLNPSRNIATRDQAEYSQGYVFTERPIKNNEKVMIMISQVQRLYEGGL 128
Query: 110 RFGFTSHDPATLAHALPKYACPDLTNKPGNWA--KALGERFCETDNVLHYYVNSTGDVHF 167
FG T DPA++ A DL P W K + + + +++L +++ +G+V F
Sbjct: 129 AFGVTCCDPASIRVAGLPDDSSDLVEMPEYWVGIKDIALQ-PKANSILSFWITDSGEVKF 187
Query: 168 GV--NGEDRGLFFSGVDTRSPLWALVDVYGNCTAVQFAD-PRVPSQRRSNHSPADEDRLV 224
+ NG L+ VD L+ DVYG+ +++ +VP +HSPA + +
Sbjct: 188 EIDSNGARTCLY---VDNSLELYMYFDVYGSTLSIKMLGYIQVP----RSHSPAARETVK 240
Query: 225 SGVRAMTVEDLPPPR 239
G + L PR
Sbjct: 241 EGPSTRNEQPLSIPR 255
>Z70205-2|CAA94116.1| 529|Caenorhabditis elegans Hypothetical
protein C11H1.3 protein.
Length = 529
Score = 46.4 bits (105), Expect = 6e-05
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 535 TGAECSICYENPIDSVLYMCGHMCMCYRCAVQQWRGKGGGQCPLCRAQIKDVIR 588
+G EC IC + D+V+ C H+C+C CA R K CP+CR+ + +IR
Sbjct: 265 SGLECIICLSDIRDTVILPCRHLCVCSNCA-DSLRYK-HNNCPICRSPFRALIR 316
>X89223-1|CAA61507.1| 582|Caenorhabditis elegans sli-1 protein.
Length = 582
Score = 46.0 bits (104), Expect = 8e-05
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 14/120 (11%)
Query: 479 FQSRPRNEVQCSSTQNSTNEQVQM-PNGHPEPLRL--------VERLPSTSRQHQPVYSV 529
+Q+ P+N+ + E + PNG + + L +R+ TS Q++ +Y
Sbjct: 324 YQTIPQNKSLIQALHEGHKEGFYIYPNGRDQDINLSKLMDVPQADRVQVTSEQYE-LYCE 382
Query: 530 IGEGPTGAECSICYENPIDSVLYMCGHMCMCYRCAVQQWRGKGGGQ-CPLCRAQIKDVIR 588
+G T C IC +N + + CGH+ +C +C GGG CP CR +IK R
Sbjct: 383 MGT--TFELCKICDDNEKNIKIEPCGHL-LCAKCLANWQDSDGGGNTCPFCRYEIKGTNR 439
>U58730-5|AAK84546.1| 582|Caenorhabditis elegans Suppressor of
lineage defect protein1, isoform a protein.
Length = 582
Score = 46.0 bits (104), Expect = 8e-05
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 14/120 (11%)
Query: 479 FQSRPRNEVQCSSTQNSTNEQVQM-PNGHPEPLRL--------VERLPSTSRQHQPVYSV 529
+Q+ P+N+ + E + PNG + + L +R+ TS Q++ +Y
Sbjct: 324 YQTIPQNKSLIQALHEGHKEGFYIYPNGRDQDINLSKLMDVPQADRVQVTSEQYE-LYCE 382
Query: 530 IGEGPTGAECSICYENPIDSVLYMCGHMCMCYRCAVQQWRGKGGGQ-CPLCRAQIKDVIR 588
+G T C IC +N + + CGH+ +C +C GGG CP CR +IK R
Sbjct: 383 MGT--TFELCKICDDNEKNIKIEPCGHL-LCAKCLANWQDSDGGGNTCPFCRYEIKGTNR 439
>U58730-4|AAK84547.1| 565|Caenorhabditis elegans Suppressor of
lineage defect protein1, isoform b protein.
Length = 565
Score = 46.0 bits (104), Expect = 8e-05
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 14/120 (11%)
Query: 479 FQSRPRNEVQCSSTQNSTNEQVQM-PNGHPEPLRL--------VERLPSTSRQHQPVYSV 529
+Q+ P+N+ + E + PNG + + L +R+ TS Q++ +Y
Sbjct: 307 YQTIPQNKSLIQALHEGHKEGFYIYPNGRDQDINLSKLMDVPQADRVQVTSEQYE-LYCE 365
Query: 530 IGEGPTGAECSICYENPIDSVLYMCGHMCMCYRCAVQQWRGKGGGQ-CPLCRAQIKDVIR 588
+G T C IC +N + + CGH+ +C +C GGG CP CR +IK R
Sbjct: 366 MGT--TFELCKICDDNEKNIKIEPCGHL-LCAKCLANWQDSDGGGNTCPFCRYEIKGTNR 422
>U58730-3|AAT92069.1| 523|Caenorhabditis elegans Suppressor of
lineage defect protein1, isoform c protein.
Length = 523
Score = 46.0 bits (104), Expect = 8e-05
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 14/120 (11%)
Query: 479 FQSRPRNEVQCSSTQNSTNEQVQM-PNGHPEPLRL--------VERLPSTSRQHQPVYSV 529
+Q+ P+N+ + E + PNG + + L +R+ TS Q++ +Y
Sbjct: 307 YQTIPQNKSLIQALHEGHKEGFYIYPNGRDQDINLSKLMDVPQADRVQVTSEQYE-LYCE 365
Query: 530 IGEGPTGAECSICYENPIDSVLYMCGHMCMCYRCAVQQWRGKGGGQ-CPLCRAQIKDVIR 588
+G T C IC +N + + CGH+ +C +C GGG CP CR +IK R
Sbjct: 366 MGT--TFELCKICDDNEKNIKIEPCGHL-LCAKCLANWQDSDGGGNTCPFCRYEIKGTNR 422
>Z83127-3|CAB05629.2| 291|Caenorhabditis elegans Hypothetical
protein T23F6.3 protein.
Length = 291
Score = 41.5 bits (93), Expect = 0.002
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 6/68 (8%)
Query: 517 PSTSRQHQPVYSVIGEGPTGA--ECSICYENPID-SVLYMCGHMCMCYRCAVQQW-RGKG 572
PSTS+ + +G P GA EC++C+E P+D C ++ C C VQ+W R
Sbjct: 187 PSTSQGTSNHAARVGS-PIGARGECTVCFETPVDPQGCNRCMNVIGCKTC-VQRWHRSST 244
Query: 573 GGQCPLCR 580
CPLCR
Sbjct: 245 QPSCPLCR 252
>Z46787-7|CAA86745.1| 235|Caenorhabditis elegans Hypothetical
protein C16C10.7 protein.
Length = 235
Score = 39.1 bits (87), Expect = 0.009
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 538 ECSICYENPIDSVLYMCGHMCMCYRCAVQQWRGKGGGQ-CPLCRAQI 583
EC+IC + D+V+ +CGH+ C+ C Q + Q CP+C++ I
Sbjct: 25 ECNICLDAAKDAVVSLCGHL-FCWPCLSQWLDTRPNNQVCPVCKSAI 70
>Z70208-6|CAA94134.1| 201|Caenorhabditis elegans Hypothetical
protein F54B11.5 protein.
Length = 201
Score = 37.5 bits (83), Expect = 0.026
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 539 CSICYENPIDSVLYMCGHMCMCYRCAVQQWRGKGGGQCPLCRAQIKDVIRT 589
C IC EN I+ +L C H C RC + + CP+C+ +I++ I +
Sbjct: 129 CVICMEN-INDLLLPCLH-AFCIRCIANEMEYRHDFSCPICKTKIRNPIES 177
>U23511-12|AAC46798.2| 610|Caenorhabditis elegans Hypothetical
protein C32D5.10 protein.
Length = 610
Score = 37.5 bits (83), Expect = 0.026
Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 538 ECSICYENPIDSV-LYMCGHMCMCYRCAVQQWRGKGGGQ-CPLCRAQIKDVIR 588
ECS+C ID+ L C H CY C V W KG G CP+C+ + + R
Sbjct: 40 ECSVCKNEIIDTTSLSDCCHE-FCYDCIVG-WLTKGSGPFCPMCKTPVSFIQR 90
>U46753-9|AAA85765.1| 226|Caenorhabditis elegans Hypothetical
protein C34F11.1 protein.
Length = 226
Score = 37.1 bits (82), Expect = 0.035
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Query: 518 STSRQHQPVYSVIGEGPTGAECSICYENPID-SVLYMCGHMCMCYRCAVQQWRGKGGGQC 576
S S P G +EC+IC+E P+D C + C +C + + C
Sbjct: 134 SASTSFAPYQRHRGSALQTSECTICFEKPVDPRGCPKCLKVIGCKKCVKKWFDTSASKAC 193
Query: 577 PLCRAQIK 584
PLCR + K
Sbjct: 194 PLCRFEWK 201
>Z81131-4|CAD01083.1| 415|Caenorhabditis elegans Hypothetical
protein T24D1.5 protein.
Length = 415
Score = 36.7 bits (81), Expect = 0.046
Identities = 28/113 (24%), Positives = 46/113 (40%), Gaps = 6/113 (5%)
Query: 473 STCAQQFQSRPRNEVQCSSTQNSTNEQVQMPNGHPEPLR----LVERLPSTSRQHQPVYS 528
ST + Q+ +N S + S+N++ N + P TS +P+ +
Sbjct: 278 STETRSLQNGVQNRFTTSFDRRSSNDEDDEENSFDSEISDSYMSYSDGPGTSMPIRPIRT 337
Query: 529 VIGEGPTGAECSICYENPID-SVLYMCGHMCMCYRCAVQQWRGKGGGQCPLCR 580
+G G +C++C+E PI+ C + C C V CPLCR
Sbjct: 338 GTPDGTWG-DCTMCFEVPIEPQGCNRCQQIIGCSACIVHWHHHALSPSCPLCR 389
>AL132876-13|CAD21663.1| 214|Caenorhabditis elegans Hypothetical
protein Y105E8A.14 protein.
Length = 214
Score = 35.9 bits (79), Expect = 0.081
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Query: 518 STSRQHQPVYSVIGEGPTGAECSICYENPI-DSVLYMCGHMCMCYRCAVQQWRGKGGGQC 576
STS Q + I EC++CY I + + CGH C+ C ++ G C
Sbjct: 4 STSSPSQQLQQAINS-TIDKECAVCYSEMILPTTIPSCGHK-FCFIC-LKGVSVSNNGDC 60
Query: 577 PLCRAQIKDVI 587
P+CR I I
Sbjct: 61 PICRGPIDSQI 71
>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
presynaptic morphologyprotein 1 protein.
Length = 3766
Score = 35.5 bits (78), Expect = 0.11
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 186 PLWALVDVYGNCTAVQFADPRVPSQRRSNHSPADEDRLVS 225
P WA+VDV+ + A F+ P +P S+ +P D++R+ S
Sbjct: 283 PNWAMVDVHEHSVASSFSLPSLPDSSPSSDTPDDDNRIHS 322
>AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical
protein F07B7.12 protein.
Length = 1900
Score = 35.5 bits (78), Expect = 0.11
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 186 PLWALVDVYGNCTAVQFADPRVPSQRRSNHSPADEDRLVS 225
P WA+VDV+ + A F+ P +P S+ +P D++R+ S
Sbjct: 283 PNWAMVDVHEHSVASSFSLPSLPDSSPSSDTPDDDNRIHS 322
>Z92803-1|CAB07242.2| 384|Caenorhabditis elegans Hypothetical
protein K01G5.1 protein.
Length = 384
Score = 33.9 bits (74), Expect = 0.33
Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 531 GEGPTGAECSICYENPIDSVLYMCGHMCMCYRCAVQQWRGKGGGQCPLCRAQIKDVIRTY 590
G+ +C IC +D ++ C H C CA++ ++ +CP+C+ ++++ T
Sbjct: 233 GDDTFPEDCFICGNPFVDPIVTKCKHY-FCTGCALKSFQKSS--KCPICQQNTENIMNTA 289
Query: 591 K 591
K
Sbjct: 290 K 290
>U10402-5|AAA19066.2| 650|Caenorhabditis elegans Tryptophanyl (w)
trna synthetaseprotein 2, isoform a protein.
Length = 650
Score = 33.9 bits (74), Expect = 0.33
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 8/53 (15%)
Query: 538 ECSICYENPIDSVLYMCGHMCMCYRC------AVQQWRGKGGGQCPLCRAQIK 584
+CSIC EN S L+ CGH+ C+ C A +CP CR + +
Sbjct: 254 QCSICLENKNPSALF-CGHL-FCWTCIQEHAVAATSSASTSSARCPQCRLEFQ 304
>AL032639-3|CAA21635.1| 283|Caenorhabditis elegans Hypothetical
protein Y38F1A.2 protein.
Length = 283
Score = 33.9 bits (74), Expect = 0.33
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
Query: 538 ECSICYENPIDSVLYMCGHMCMCYRCAVQQWRGKGG----GQCPLCRA 581
EC IC N VL CGH+ C C +Q W+ C +CR+
Sbjct: 104 ECPICLANASFPVLTDCGHI-FCCECIIQYWQQSKAIVTPCDCAMCRS 150
>AF304126-1|AAG50239.1| 384|Caenorhabditis elegans RING and zinc
finger protein protein.
Length = 384
Score = 33.9 bits (74), Expect = 0.33
Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 531 GEGPTGAECSICYENPIDSVLYMCGHMCMCYRCAVQQWRGKGGGQCPLCRAQIKDVIRTY 590
G+ +C IC +D ++ C H C CA++ ++ +CP+C+ ++++ T
Sbjct: 233 GDDTFPEDCFICGNPFVDPIVTKCKHY-FCTGCALKSFQKSS--KCPICQQNTENIMNTA 289
Query: 591 K 591
K
Sbjct: 290 K 290
>Z81505-1|CAB04122.1| 673|Caenorhabditis elegans Hypothetical
protein F16A11.1 protein.
Length = 673
Score = 33.1 bits (72), Expect = 0.57
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 6/54 (11%)
Query: 539 CSICYENPIDSVLYMCGHMCMCYRCAVQQWRGKGGGQCPLCRAQIKDVIRTYKS 592
C+IC+ P + L C H C C CPLCR I++ I+ K+
Sbjct: 564 CTICFAAPGSTTLLPCNHDGFCSDCCNMM------DHCPLCRKPIEERIQKTKN 611
>Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical
protein C34F6.1 protein.
Length = 1043
Score = 33.1 bits (72), Expect = 0.57
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 310 TSCDPGTLRPCDLPDDAELLLDRPEYW 336
T+C PGT RPCDLP + +++ E W
Sbjct: 763 TNCCPGTRRPCDLPLEVGQGVEKLERW 789
>Z81131-2|CAB03425.1| 349|Caenorhabditis elegans Hypothetical
protein T24D1.3 protein.
Length = 349
Score = 32.7 bits (71), Expect = 0.75
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 538 ECSICYENPIDSV-LYMCGHMCMCYRCAVQQWRGKGGGQCPLCR 580
EC++C+E P+ + C + C C +R CPLCR
Sbjct: 273 ECTMCFEVPVSPLGCNNCLQIIGCEECVDIWYRSSSKPSCPLCR 316
>Z66495-6|CAA91275.2| 547|Caenorhabditis elegans Hypothetical
protein C36A4.8 protein.
Length = 547
Score = 32.3 bits (70), Expect = 0.99
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 538 ECSICYENPIDSVLYMCGHMCMCYRCAVQQWRGKGGGQCPLCRA 581
+C IC D +L C H+ C C + K QCP+CR+
Sbjct: 20 KCGICCSTYKDPILSTCFHI-FCRSCINACFERKRKVQCPICRS 62
>U67953-1|AAQ91892.1| 398|Caenorhabditis elegans Hypothetical
protein ZC13.1b protein.
Length = 398
Score = 32.3 bits (70), Expect = 0.99
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Query: 539 CSICYENPIDSVLYMCGHMCMCYRCAVQQWRGKGGGQCPLCRAQI-KDVIRTYKS 592
C++C+ + + + C H+ C C ++ W + CP+CRA++ KD +K+
Sbjct: 337 CAVCHGDLLQPIKLECTHV-FCKFC-IETWLDQKS-TCPICRAEVTKDADNDWKN 388
>AF039047-9|AAB94229.2| 400|Caenorhabditis elegans Hypothetical
protein K11D12.9 protein.
Length = 400
Score = 32.3 bits (70), Expect = 0.99
Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 4/54 (7%)
Query: 537 AECSICYENPIDSVLYMCGHMCMCYRCAVQQWRGKGGGQCPLCRAQIKDVIRTY 590
AEC IC V C H+ C C + +CP CR+ I++ I +
Sbjct: 350 AECCICLATKPSIVFMPCRHLITCSGC----YDASDFRECPTCRSTIENSITVF 399
>Z93384-1|CAB07633.3| 342|Caenorhabditis elegans Hypothetical
protein H08M01.1 protein.
Length = 342
Score = 31.1 bits (67), Expect = 2.3
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 7/54 (12%)
Query: 534 PTGAECSICYENPID-SVLYMCGHMCMCYRC----AVQQ--WRGKGGGQCPLCR 580
PT +C IC E P++ V C M C +C V + W+ CPLCR
Sbjct: 270 PTLQDCVICMEEPVNPKVCPKCLKMIGCAKCFRWWTVFRCWWQSSLNPSCPLCR 323
>U41273-2|AAA82454.2| 306|Caenorhabditis elegans Hypothetical
protein C26B9.6 protein.
Length = 306
Score = 31.1 bits (67), Expect = 2.3
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Query: 539 CSICYEN-PIDSVLYMCGHMCMCYRCAVQQWRGKGGGQCPLCRAQI 583
C ICY I + + CGH CY C + G CP+CR +I
Sbjct: 107 CYICYYKLTIPTRIENCGHE-FCYVCLKSNFAM--GNDCPVCRGKI 149
>Z70287-8|CAA94301.2| 1717|Caenorhabditis elegans Hypothetical protein
R09E10.7 protein.
Length = 1717
Score = 30.7 bits (66), Expect = 3.0
Identities = 20/66 (30%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Query: 467 QPLAQPSTCAQQFQSRPRNEVQCSSTQNSTNEQVQMPNGHPEPLRL-VERLPSTSRQHQP 525
QP Q +Q N QN Q+Q PN P+P RL V LP + P
Sbjct: 1364 QPPPQARLVPNPYQIMTNNRNIQKQQQNQQQHQLQRPNNAPQPQRLQVPALPPAAYHLYP 1423
Query: 526 -VYSVI 530
Y ++
Sbjct: 1424 QAYEIV 1429
>U64842-9|AAB37081.2| 458|Caenorhabditis elegans Hypothetical
protein F25B4.2 protein.
Length = 458
Score = 30.7 bits (66), Expect = 3.0
Identities = 11/39 (28%), Positives = 22/39 (56%)
Query: 550 VLYMCGHMCMCYRCAVQQWRGKGGGQCPLCRAQIKDVIR 588
V CGH+ + VQ+ G+ G+CP+C + + +++
Sbjct: 335 VYLQCGHVQGRHEWGVQENSGQRSGKCPICLVESERIVQ 373
>U39853-8|AAQ81277.1| 1609|Caenorhabditis elegans Hypothetical
protein F13B9.1c protein.
Length = 1609
Score = 30.7 bits (66), Expect = 3.0
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 467 QPLAQPSTCAQQFQSRPR--NEVQCSSTQNSTNEQVQMPNGHPEPLRLVERLPSTSRQ 522
QP QPS +QQ Q +P+ + Q +T +QVQ P+ + P ++Q
Sbjct: 107 QPPQQPSLSSQQIQHQPQLPKAKKAPKVQTNTQQQVQQNFNPTPPVLTTSQKPGNTQQ 164
>U39853-7|AAM54194.1| 1614|Caenorhabditis elegans Hypothetical
protein F13B9.1b protein.
Length = 1614
Score = 30.7 bits (66), Expect = 3.0
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 467 QPLAQPSTCAQQFQSRPR--NEVQCSSTQNSTNEQVQMPNGHPEPLRLVERLPSTSRQ 522
QP QPS +QQ Q +P+ + Q +T +QVQ P+ + P ++Q
Sbjct: 107 QPPQQPSLSSQQIQHQPQLPKAKKAPKVQTNTQQQVQQNFNPTPPVLTTSQKPGNTQQ 164
>U39853-6|AAM54193.2| 1632|Caenorhabditis elegans Hypothetical
protein F13B9.1a protein.
Length = 1632
Score = 30.7 bits (66), Expect = 3.0
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 467 QPLAQPSTCAQQFQSRPR--NEVQCSSTQNSTNEQVQMPNGHPEPLRLVERLPSTSRQ 522
QP QPS +QQ Q +P+ + Q +T +QVQ P+ + P ++Q
Sbjct: 107 QPPQQPSLSSQQIQHQPQLPKAKKAPKVQTNTQQQVQQNFNPTPPVLTTSQKPGNTQQ 164
>U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical
protein EEED8.16 protein.
Length = 590
Score = 30.7 bits (66), Expect = 3.0
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 6/43 (13%)
Query: 539 CSICYENPIDSVL-YMCGHMCMCYRCAVQQWRGKGGGQCPLCR 580
C++C E DSVL +C H RC ++QW CP+CR
Sbjct: 260 CAVCLERMDDSVLAILCNHSFHA-RC-LEQW---ADNTCPVCR 297
>AJ288951-1|CAB97346.1| 458|Caenorhabditis elegans Pellino protein
protein.
Length = 458
Score = 30.7 bits (66), Expect = 3.0
Identities = 11/39 (28%), Positives = 22/39 (56%)
Query: 550 VLYMCGHMCMCYRCAVQQWRGKGGGQCPLCRAQIKDVIR 588
V CGH+ + VQ+ G+ G+CP+C + + +++
Sbjct: 335 VYLQCGHVQGRHEWGVQENSGQRSGKCPICLVESERIVQ 373
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical
protein K08C7.3b protein.
Length = 3672
Score = 30.3 bits (65), Expect = 4.0
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 444 LTLASAHYIEPIQATSQICLTGLQPLAQPSTCAQQFQSRPRNEVQCSST 492
+TL + + SQI ++ +P+ STC + Q +P E+ CS T
Sbjct: 18 VTLLAQFTYSQVLTPSQITISHRKPITATSTCG-EIQGQPVTEIYCSLT 65
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical
protein K08C7.3a protein.
Length = 3704
Score = 30.3 bits (65), Expect = 4.0
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 444 LTLASAHYIEPIQATSQICLTGLQPLAQPSTCAQQFQSRPRNEVQCSST 492
+TL + + SQI ++ +P+ STC + Q +P E+ CS T
Sbjct: 18 VTLLAQFTYSQVLTPSQITISHRKPITATSTCG-EIQGQPVTEIYCSLT 65
>U97193-14|AAB52442.2| 381|Caenorhabditis elegans Ring finger
protein protein 1 protein.
Length = 381
Score = 30.3 bits (65), Expect = 4.0
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 9/57 (15%)
Query: 538 ECSICYENPIDSVLYM-----CGHMCMCYRCA--VQQWRGKGGGQCPLCRAQIKDVI 587
+C +CY+ P + + CGH C C VQ + +CP CRA+ K I
Sbjct: 21 QCQVCYQ-PFNETTKLARSLHCGHT-FCTECIRNVQNYGNSPHLECPTCRAETKSNI 75
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 30.3 bits (65), Expect = 4.0
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 444 LTLASAHYIEPIQATSQICLTGLQPLAQPSTCAQQFQSRPRNEVQCSST 492
+TL + + SQI ++ +P+ STC + Q +P E+ CS T
Sbjct: 18 VTLLAQFTYSQVLTPSQITISHRKPITATSTCG-EIQGQPVTEIYCSLT 65
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 30.3 bits (65), Expect = 4.0
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 444 LTLASAHYIEPIQATSQICLTGLQPLAQPSTCAQQFQSRPRNEVQCSST 492
+TL + + SQI ++ +P+ STC + Q +P E+ CS T
Sbjct: 18 VTLLAQFTYSQVLTPSQITISHRKPITATSTCG-EIQGQPVTEIYCSLT 65
>U53337-2|AAA96184.1| 639|Caenorhabditis elegans Hypothetical
protein R02E12.4 protein.
Length = 639
Score = 29.9 bits (64), Expect = 5.3
Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 538 ECSICYENPIDSVLYMCGHMCMCYRCAVQQWRGKGGGQCPLCRAQIKDV 586
+C IC++ + V ++ +C CA +W CP+CR +++++
Sbjct: 25 QCHICFQVNHEPVTFLTCKHSICAGCA-GRWLSSCS-VCPMCRTRVREI 71
>Z81547-2|CAB04460.1| 209|Caenorhabditis elegans Hypothetical
protein F53F8.3 protein.
Length = 209
Score = 29.1 bits (62), Expect = 9.2
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 554 CGHMCMCYRCAVQQWRGKGGGQCPLCRAQIK 584
CGH MC C VQ+ G+G +CP CR K
Sbjct: 163 CGHT-MCMGC-VQKIVGQGYIKCPFCRIVTK 191
>U39996-8|AAA81094.2| 1102|Caenorhabditis elegans Hypothetical protein
C56E6.6 protein.
Length = 1102
Score = 29.1 bits (62), Expect = 9.2
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 536 GAECSICYENPIDSVLYMCGHMCMCY 561
G EC++ Y NP+ ++Y+ +C+ Y
Sbjct: 1076 GLECAVKYSNPLKPLIYVLMLVCLSY 1101
>AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical
protein Y55F3BR.2 protein.
Length = 1594
Score = 29.1 bits (62), Expect = 9.2
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 531 GEGPTGAECSICYENPIDSVLYMCGHMCMCYRCAVQQWRGKGGG 574
GEG G C YE D ++Y C Y C++Q +G G G
Sbjct: 665 GEGLGGTACPANYECTFDGLVYGC-CPSKAYTCSLQVNKGIGCG 707
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.319 0.135 0.420
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,376,813
Number of Sequences: 27539
Number of extensions: 673500
Number of successful extensions: 1377
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 1333
Number of HSP's gapped (non-prelim): 61
length of query: 592
length of database: 12,573,161
effective HSP length: 85
effective length of query: 507
effective length of database: 10,232,346
effective search space: 5187799422
effective search space used: 5187799422
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 62 (29.1 bits)
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