Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002348-TA|BGIBMGA002348-PA|IPR001816|Elongation factor
Ts
(174 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L37936-1|AAC37577.1| 294|Homo sapiens elongation factor Ts prot... 102 8e-22
BC022862-1|AAH22862.1| 346|Homo sapiens Ts translation elongati... 102 8e-22
AF110399-1|AAD20224.1| 325|Homo sapiens elongation factor Ts pr... 102 8e-22
BC093068-1|AAH93068.1| 325|Homo sapiens TSFM protein protein. 99 4e-21
U77949-1|AAB38317.1| 560|Homo sapiens Cdc6-related protein prot... 31 1.6
BC025232-1|AAH25232.1| 560|Homo sapiens cell division cycle 6 h... 31 1.6
AY150310-1|AAN10296.1| 560|Homo sapiens CDC6 cell division cycl... 31 1.6
AF022109-1|AAC52071.1| 560|Homo sapiens HsCdc18p protein. 31 1.6
U35832-1|AAC99992.1| 640|Homo sapiens anthracycline-associated ... 30 4.9
CR456756-1|CAG33037.1| 640|Homo sapiens UBA2 protein. 30 4.9
BT009781-1|AAP88783.1| 640|Homo sapiens SUMO-1 activating enzym... 30 4.9
BC003153-1|AAH03153.1| 640|Homo sapiens SUMO1 activating enzyme... 30 4.9
AF110957-1|AAD24434.1| 640|Homo sapiens SUMO-1 activating enzym... 30 4.9
AF090384-1|AAD12784.1| 640|Homo sapiens SUMO-1-activating enzym... 30 4.9
AF079566-1|AAD23914.1| 640|Homo sapiens ubiquitin-like protein ... 30 4.9
AB208872-1|BAD92109.1| 295|Homo sapiens SUMO-1 activating enzym... 30 4.9
AB015337-1|BAA34795.1| 105|Homo sapiens HRIHFB2115 protein. 30 4.9
U93871-1|AAB68767.1| 400|Homo sapiens RaP2 interacting protein ... 29 6.5
CR456748-1|CAG33029.1| 405|Homo sapiens RPIP8 protein. 29 6.5
BX537443-1|CAD97685.1| 400|Homo sapiens hypothetical protein pr... 29 6.5
BC006194-1|AAH06194.1| 405|Homo sapiens RaP2 interacting protei... 29 6.5
AF055026-1|AAC09366.1| 405|Homo sapiens RaP2 interacting protei... 29 6.5
AB209802-1|BAD93039.1| 481|Homo sapiens RaP2 interacting protei... 29 6.5
>L37936-1|AAC37577.1| 294|Homo sapiens elongation factor Ts
protein.
Length = 294
Score = 102 bits (244), Expect = 8e-22
Identities = 62/162 (38%), Positives = 91/162 (56%), Gaps = 11/162 (6%)
Query: 3 LDSEQLGTLHAEGGKK--LSEILALFIGSVGENAVLRRAECWKANSEDVKIAGYTHPAPX 60
L+S +L L A ++ L + LAL IG +GEN +L+RA W + Y H A
Sbjct: 133 LNSSELSGLPAGPDREGSLKDQLALAIGKLGENMILKRA-AWVKVPSGFYVGSYVHGAMQ 191
Query: 61 XXXXXXX--GKYGALL---AYKQPNDVEDIGRQLCQHIVGCAPTKIGDKEKDKPAKNSDD 115
GKYGAL+ +Q ++ED+GR+L QH+VG AP +G + D+P +
Sbjct: 192 SPSLHKLVLGKYGALVICETSEQKTNLEDVGRRLGQHVVGMAPLSVGSLD-DEPG--GEA 248
Query: 116 ETCLIFQEYLLDPSYTIEEILQKHNVEIIDYVRFSCGEVPES 157
ET ++ Q YLLDPS T+ + +Q V ++D+VRF CGE E+
Sbjct: 249 ETKMLSQPYLLDPSITLGQYVQPQGVSVVDFVRFECGEGEEA 290
>BC022862-1|AAH22862.1| 346|Homo sapiens Ts translation elongation
factor, mitochondrial protein.
Length = 346
Score = 102 bits (244), Expect = 8e-22
Identities = 62/162 (38%), Positives = 91/162 (56%), Gaps = 11/162 (6%)
Query: 3 LDSEQLGTLHAEGGKK--LSEILALFIGSVGENAVLRRAECWKANSEDVKIAGYTHPAPX 60
L+S +L L A ++ L + LAL IG +GEN +L+RA W + Y H A
Sbjct: 185 LNSSELSGLPAGPDREGSLKDQLALAIGKLGENMILKRA-AWVKVPSGFYVGSYVHGAMQ 243
Query: 61 XXXXXXX--GKYGALL---AYKQPNDVEDIGRQLCQHIVGCAPTKIGDKEKDKPAKNSDD 115
GKYGAL+ +Q ++ED+GR+L QH+VG AP +G + D+P +
Sbjct: 244 SPSLHKLVLGKYGALVICETSEQKTNLEDVGRRLGQHVVGMAPLSVGSLD-DEPG--GEA 300
Query: 116 ETCLIFQEYLLDPSYTIEEILQKHNVEIIDYVRFSCGEVPES 157
ET ++ Q YLLDPS T+ + +Q V ++D+VRF CGE E+
Sbjct: 301 ETKMLSQPYLLDPSITLGQYVQPQGVSVVDFVRFECGEGEEA 342
>AF110399-1|AAD20224.1| 325|Homo sapiens elongation factor Ts
protein.
Length = 325
Score = 102 bits (244), Expect = 8e-22
Identities = 62/162 (38%), Positives = 91/162 (56%), Gaps = 11/162 (6%)
Query: 3 LDSEQLGTLHAEGGKK--LSEILALFIGSVGENAVLRRAECWKANSEDVKIAGYTHPAPX 60
L+S +L L A ++ L + LAL IG +GEN +L+RA W + Y H A
Sbjct: 164 LNSSELSGLPAGPDREGSLKDQLALAIGKLGENMILKRA-AWVKVPSGFYVGSYVHGAMQ 222
Query: 61 XXXXXXX--GKYGALL---AYKQPNDVEDIGRQLCQHIVGCAPTKIGDKEKDKPAKNSDD 115
GKYGAL+ +Q ++ED+GR+L QH+VG AP +G + D+P +
Sbjct: 223 SPSLHKLVLGKYGALVICETSEQKTNLEDVGRRLGQHVVGMAPLSVGSLD-DEPG--GEA 279
Query: 116 ETCLIFQEYLLDPSYTIEEILQKHNVEIIDYVRFSCGEVPES 157
ET ++ Q YLLDPS T+ + +Q V ++D+VRF CGE E+
Sbjct: 280 ETKMLSQPYLLDPSITLGQYVQPQGVSVVDFVRFECGEGEEA 321
>BC093068-1|AAH93068.1| 325|Homo sapiens TSFM protein protein.
Length = 325
Score = 99 bits (238), Expect = 4e-21
Identities = 61/162 (37%), Positives = 90/162 (55%), Gaps = 11/162 (6%)
Query: 3 LDSEQLGTLHAEGGKK--LSEILALFIGSVGENAVLRRAECWKANSEDVKIAGYTHPAPX 60
L+S +L L A ++ L + LAL IG +GE +L+RA W + Y H A
Sbjct: 164 LNSSELSGLPAGPDREGSLKDQLALAIGKLGETMILKRA-AWVKVPSGFYVGSYVHGAMQ 222
Query: 61 XXXXXXX--GKYGALL---AYKQPNDVEDIGRQLCQHIVGCAPTKIGDKEKDKPAKNSDD 115
GKYGAL+ +Q ++ED+GR+L QH+VG AP +G + D+P +
Sbjct: 223 SPSLHKLVLGKYGALVICETSEQKTNLEDVGRRLGQHVVGMAPLSVGSLD-DEPG--GEA 279
Query: 116 ETCLIFQEYLLDPSYTIEEILQKHNVEIIDYVRFSCGEVPES 157
ET ++ Q YLLDPS T+ + +Q V ++D+VRF CGE E+
Sbjct: 280 ETKMLSQPYLLDPSITLGQYVQPQGVSVVDFVRFECGEGEEA 321
>U77949-1|AAB38317.1| 560|Homo sapiens Cdc6-related protein
protein.
Length = 560
Score = 31.5 bits (68), Expect = 1.6
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 92 HIVGCAPTKIGDKEKDKPAKNSDDETCLIFQEYLLDPSYTIEEILQKHNVEIIDYVRFS 150
H+ C+P K G KE P ++ L+F L S + E+ + H +I+ VR S
Sbjct: 69 HLPPCSPPKQGKKENGPPHSHTLKGRRLVFDNQLTIKSPSKRELAKVHQNKILSSVRKS 127
>BC025232-1|AAH25232.1| 560|Homo sapiens cell division cycle 6
homolog (S. cerevisiae) protein.
Length = 560
Score = 31.5 bits (68), Expect = 1.6
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 92 HIVGCAPTKIGDKEKDKPAKNSDDETCLIFQEYLLDPSYTIEEILQKHNVEIIDYVRFS 150
H+ C+P K G KE P ++ L+F L S + E+ + H +I+ VR S
Sbjct: 69 HLPPCSPPKQGKKENGPPHSHTLKGRRLVFDNQLTIKSPSKRELAKVHQNKILSSVRKS 127
>AY150310-1|AAN10296.1| 560|Homo sapiens CDC6 cell division cycle 6
homolog (S. cerevisiae) protein.
Length = 560
Score = 31.5 bits (68), Expect = 1.6
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 92 HIVGCAPTKIGDKEKDKPAKNSDDETCLIFQEYLLDPSYTIEEILQKHNVEIIDYVRFS 150
H+ C+P K G KE P ++ L+F L S + E+ + H +I+ VR S
Sbjct: 69 HLPPCSPPKQGKKENGPPHSHTLKGRRLVFDNQLTIKSPSKRELAKVHQNKILSSVRKS 127
>AF022109-1|AAC52071.1| 560|Homo sapiens HsCdc18p protein.
Length = 560
Score = 31.5 bits (68), Expect = 1.6
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 92 HIVGCAPTKIGDKEKDKPAKNSDDETCLIFQEYLLDPSYTIEEILQKHNVEIIDYVRFS 150
H+ C+P K G KE P ++ L+F L S + E+ + H +I+ VR S
Sbjct: 69 HLPPCSPPKQGKKENGPPHSHTLKGRRLVFDNQLTIKSPSKRELAKVHQNKILSSVRKS 127
>U35832-1|AAC99992.1| 640|Homo sapiens anthracycline-associated
resistance ARX protein.
Length = 640
Score = 29.9 bits (64), Expect = 4.9
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 83 EDIGRQLCQHIVGCAPTKIGDKEKDKPAKN 112
ED+G+ + +VG AP K+G K+ + AK+
Sbjct: 536 EDLGKDVEFEVVGDAPEKVGPKQAEDAAKS 565
>CR456756-1|CAG33037.1| 640|Homo sapiens UBA2 protein.
Length = 640
Score = 29.9 bits (64), Expect = 4.9
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 83 EDIGRQLCQHIVGCAPTKIGDKEKDKPAKN 112
ED+G+ + +VG AP K+G K+ + AK+
Sbjct: 536 EDLGKDVEFEVVGDAPEKVGPKQAEDAAKS 565
>BT009781-1|AAP88783.1| 640|Homo sapiens SUMO-1 activating enzyme
subunit 2 protein.
Length = 640
Score = 29.9 bits (64), Expect = 4.9
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 83 EDIGRQLCQHIVGCAPTKIGDKEKDKPAKN 112
ED+G+ + +VG AP K+G K+ + AK+
Sbjct: 536 EDLGKDVEFEVVGDAPEKVGPKQAEDAAKS 565
>BC003153-1|AAH03153.1| 640|Homo sapiens SUMO1 activating enzyme
subunit 2 protein.
Length = 640
Score = 29.9 bits (64), Expect = 4.9
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 83 EDIGRQLCQHIVGCAPTKIGDKEKDKPAKN 112
ED+G+ + +VG AP K+G K+ + AK+
Sbjct: 536 EDLGKDVEFEVVGDAPEKVGPKQAEDAAKS 565
>AF110957-1|AAD24434.1| 640|Homo sapiens SUMO-1 activating enzyme
subunit 2 protein.
Length = 640
Score = 29.9 bits (64), Expect = 4.9
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 83 EDIGRQLCQHIVGCAPTKIGDKEKDKPAKN 112
ED+G+ + +VG AP K+G K+ + AK+
Sbjct: 536 EDLGKDVEFEVVGDAPEKVGPKQAEDAAKS 565
>AF090384-1|AAD12784.1| 640|Homo sapiens SUMO-1-activating enzyme
E1 C subunit protein.
Length = 640
Score = 29.9 bits (64), Expect = 4.9
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 83 EDIGRQLCQHIVGCAPTKIGDKEKDKPAKN 112
ED+G+ + +VG AP K+G K+ + AK+
Sbjct: 536 EDLGKDVEFEVVGDAPEKVGPKQAEDAAKS 565
>AF079566-1|AAD23914.1| 640|Homo sapiens ubiquitin-like protein
activating enzyme protein.
Length = 640
Score = 29.9 bits (64), Expect = 4.9
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 83 EDIGRQLCQHIVGCAPTKIGDKEKDKPAKN 112
ED+G+ + +VG AP K+G K+ + AK+
Sbjct: 536 EDLGKDVEFEVVGDAPEKVGPKQAEDAAKS 565
>AB208872-1|BAD92109.1| 295|Homo sapiens SUMO-1 activating enzyme
subunit 2 variant protein.
Length = 295
Score = 29.9 bits (64), Expect = 4.9
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 83 EDIGRQLCQHIVGCAPTKIGDKEKDKPAKN 112
ED+G+ + +VG AP K+G K+ + AK+
Sbjct: 191 EDLGKDVEFEVVGDAPEKVGPKQAEDAAKS 220
>AB015337-1|BAA34795.1| 105|Homo sapiens HRIHFB2115 protein.
Length = 105
Score = 29.9 bits (64), Expect = 4.9
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 83 EDIGRQLCQHIVGCAPTKIGDKEKDKPAKN 112
ED+G+ + +VG AP K+G K+ + AK+
Sbjct: 1 EDLGKDVEFEVVGDAPEKVGPKQAEDAAKS 30
>U93871-1|AAB68767.1| 400|Homo sapiens RaP2 interacting protein 8
protein.
Length = 400
Score = 29.5 bits (63), Expect = 6.5
Identities = 10/28 (35%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Query: 145 DYVRFSCGEVPESCMPGVEKQPLETVQT 172
DY+R +C +VP +C+ +E +E + T
Sbjct: 90 DYIRLACSKVPNNCVSSIEN--MENIST 115
>CR456748-1|CAG33029.1| 405|Homo sapiens RPIP8 protein.
Length = 405
Score = 29.5 bits (63), Expect = 6.5
Identities = 10/28 (35%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Query: 145 DYVRFSCGEVPESCMPGVEKQPLETVQT 172
DY+R +C +VP +C+ +E +E + T
Sbjct: 95 DYIRLACSKVPNNCVSSIEN--MENIST 120
>BX537443-1|CAD97685.1| 400|Homo sapiens hypothetical protein
protein.
Length = 400
Score = 29.5 bits (63), Expect = 6.5
Identities = 10/28 (35%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Query: 145 DYVRFSCGEVPESCMPGVEKQPLETVQT 172
DY+R +C +VP +C+ +E +E + T
Sbjct: 90 DYIRLACSKVPNNCVSSIEN--MENIST 115
>BC006194-1|AAH06194.1| 405|Homo sapiens RaP2 interacting protein 8
protein.
Length = 405
Score = 29.5 bits (63), Expect = 6.5
Identities = 10/28 (35%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Query: 145 DYVRFSCGEVPESCMPGVEKQPLETVQT 172
DY+R +C +VP +C+ +E +E + T
Sbjct: 95 DYIRLACSKVPNNCVSSIEN--MENIST 120
>AF055026-1|AAC09366.1| 405|Homo sapiens RaP2 interacting protein 8
protein.
Length = 405
Score = 29.5 bits (63), Expect = 6.5
Identities = 10/28 (35%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Query: 145 DYVRFSCGEVPESCMPGVEKQPLETVQT 172
DY+R +C +VP +C+ +E +E + T
Sbjct: 95 DYIRLACSKVPNNCVSSIEN--MENIST 120
>AB209802-1|BAD93039.1| 481|Homo sapiens RaP2 interacting protein 8
variant protein.
Length = 481
Score = 29.5 bits (63), Expect = 6.5
Identities = 10/28 (35%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Query: 145 DYVRFSCGEVPESCMPGVEKQPLETVQT 172
DY+R +C +VP +C+ +E +E + T
Sbjct: 130 DYIRLACSKVPNNCVSSIEN--MENIST 155
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.315 0.135 0.400
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,672,452
Number of Sequences: 224733
Number of extensions: 1007148
Number of successful extensions: 1357
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1332
Number of HSP's gapped (non-prelim): 23
length of query: 174
length of database: 73,234,838
effective HSP length: 85
effective length of query: 89
effective length of database: 54,132,533
effective search space: 4817795437
effective search space used: 4817795437
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 62 (29.1 bits)
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