GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002348-TA|BGIBMGA002348-PA|IPR001816|Elongation factor
Ts
         (174 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   2.9  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   2.9  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 8/21 (38%), Positives = 13/21 (61%)

Query: 128 PSYTIEEILQKHNVEIIDYVR 148
           P Y+   I++ HN+E   YV+
Sbjct: 276 PEYSSSIIMELHNIEGTHYVK 296


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 8/21 (38%), Positives = 13/21 (61%)

Query: 128 PSYTIEEILQKHNVEIIDYVR 148
           P Y+   I++ HN+E   YV+
Sbjct: 291 PEYSSSIIMELHNIEGTHYVK 311


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.315    0.135    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,057
Number of Sequences: 429
Number of extensions: 1829
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 174
length of database: 140,377
effective HSP length: 54
effective length of query: 120
effective length of database: 117,211
effective search space: 14065320
effective search space used: 14065320
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)
S2: 41 (20.6 bits)